FFCP PHASE1:Mm9::chr1:173319051..173319066,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=226652|HGNC=|MCL_coexpression_id=36|UniProt=E9QMX7|association_with_transcript=-18bp_to_ENSMUST00000056449,ENSMUST00000131607,ENSMUST00000135312_5end|description=CAGE_peak_4_at_Arhgap30_5end|id=chr1:173319051..173319066,+|ontology_enrichment_celltype=CL:0000838!2.05e-09!12;CL:0000084!1.35e-08!11;CL:0000827!1.35e-08!11;CL:0002031!2.32e-08!25;CL:0000542!2.79e-08!13;CL:0000051!2.79e-08!13;CL:0000988!3.34e-08!32;CL:0002032!3.34e-08!32;CL:0000037!3.34e-08!32;CL:0000566!3.34e-08!32;CL:0000837!3.34e-08!32;CL:0000791!1.65e-07!9;CL:0000789!1.65e-07!9;CL:0002420!1.65e-07!9;CL:0002419!1.65e-07!9;CL:0000790!1.65e-07!9;CL:0000738!2.62e-07!17;CL:0002087!2.62e-07!17;CL:0000624!5.29e-07!8|ontology_enrichment_celltype_v019_2=CL:0000838,7.01e-19,12;CL:0000542,3.36e-17,13;CL:0000051,3.36e-17,13;CL:0000084,4.45e-17,11;CL:0000827,4.45e-17,11;CL:0002031,7.32e-15,25;CL:0000791,1.10e-14,9;CL:0000789,1.10e-14,9;CL:0002420,1.10e-14,9;CL:0002419,1.10e-14,9;CL:0000790,1.10e-14,9;CL:0000624,1.41e-13,8;CL:0000738,1.82e-12,17;CL:0002087,1.82e-12,17;CL:0000988,4.38e-12,32;CL:0002032,4.38e-12,32;CL:0000037,4.38e-12,32;CL:0000837,4.38e-12,32;CL:0000893,1.97e-10,6;CL:0002489,1.97e-10,6;CL:0000898,1.97e-10,6;CL:0000809,1.97e-10,6;CL:0000810,1.97e-10,6;CL:0000895,1.97e-10,6;CL:0000808,1.97e-10,6;CL:0000894,1.97e-10,6;CL:0000806,1.97e-10,6;CL:0000807,1.97e-10,6;CL:0000805,1.97e-10,6;CL:0002425,1.97e-10,6;CL:0002436,1.97e-10,6;CL:0002427,1.97e-10,6;CL:0002428,1.97e-10,6;CL:0002429,1.97e-10,6;CL:0002433,1.97e-10,6;CL:0002431,1.97e-10,6;CL:0002432,1.97e-10,6;CL:0002320,4.12e-08,46;CL:0000134,4.12e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.08e-07,3;DOID:4045,5.08e-07,3|ontology_enrichment_uberon=UBERON:0002193!4.19e-18!48;UBERON:0002405!1.20e-17!70;UBERON:0002390!9.69e-17!45;UBERON:0003061!9.69e-17!45;UBERON:0004177!1.09e-14!29;UBERON:0005057!2.71e-13!51;UBERON:0003408!6.38e-12!24;UBERON:0002370!1.57e-11!23;UBERON:0000974!1.57e-11!23;UBERON:0004807!1.57e-11!23;UBERON:0005058!1.57e-11!23;UBERON:0003351!1.57e-11!23;UBERON:0009113!1.57e-11!23;UBERON:0003295!1.57e-11!23;UBERON:0009722!1.57e-11!23;UBERON:0005562!1.57e-11!23;UBERON:0007690!1.57e-11!23;UBERON:0006562!1.14e-10!24;UBERON:0001557!1.14e-10!24;UBERON:0001042!1.14e-10!24;UBERON:0008814!1.14e-10!24;UBERON:0009145!1.14e-10!24;UBERON:0001004!3.28e-09!42;UBERON:0000065!7.66e-09!41;UBERON:0000072!1.64e-08!27;UBERON:0001041!1.26e-07!92;UBERON:0002368!2.12e-07!60;UBERON:0005911!2.40e-07!69;UBERON:0000077!2.52e-07!97;UBERON:0002530!4.70e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.27e-29,29;UBERON:0005057,2.27e-29,29;UBERON:0002390,2.06e-26,45;UBERON:0003061,2.06e-26,45;UBERON:0002193,2.35e-26,48;UBERON:0002405,2.35e-26,48;UBERON:0002370,8.81e-24,23;UBERON:0000974,8.81e-24,23;UBERON:0004807,8.81e-24,23;UBERON:0005058,8.81e-24,23;UBERON:0003351,8.81e-24,23;UBERON:0009113,8.81e-24,23;UBERON:0003295,8.81e-24,23;UBERON:0009722,8.81e-24,23;UBERON:0005562,8.81e-24,23;UBERON:0007690,8.81e-24,23;UBERON:0000077,3.36e-23,35;UBERON:0006562,1.43e-22,24;UBERON:0003408,1.43e-22,24;UBERON:0001557,1.43e-22,24;UBERON:0001042,1.43e-22,24;UBERON:0008814,1.43e-22,24;UBERON:0009145,1.43e-22,24;UBERON:0000072,1.75e-19,27;UBERON:0000065,9.74e-14,41;UBERON:0007811,2.45e-13,36;UBERON:0001004,2.79e-13,42;UBERON:0003081,7.96e-12,87;UBERON:0000926,8.78e-11,120;UBERON:0004120,8.78e-11,120;UBERON:0006603,8.78e-11,120;UBERON:0000153,2.29e-10,43;UBERON:0001041,5.52e-09,80;UBERON:0000490,9.38e-09,66;UBERON:0002384,4.12e-08,46;UBERON:0003929,6.14e-08,55;UBERON:0002368,7.00e-07,60;UBERON:0005911,8.81e-07,69|phase1_expression=0,0,0,0,0,0,0,6.97265946584512,2.956563165185,3.7450324211519,4.10923123741212,4.22792442675283,6.67682846731702,6.55653018142481,0.999329285446988,2.42970320867791,0,9.77932712610537,7.54129384831563,10.1853516431527,0.255129870453209,2.38298282882125,1.30599894569468,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.1573594788094,9.42342739152837,18.8234076169925,15.0270006690858,13.5942898848723,0,0,0,0,0,0,0,0,0,10.0669563634642,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,5.43769555659061,0.148442139064825,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.578397427679647,0.884610551949874,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,0.599075622529601,1.19980546198682,0.762421362438388,0,0,0,0.173824320192276,0,0,0,0,1.7416975885413,0,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.667380422864376,0,0.674586337154561,0.405720242777006,0,0.50925170356284,0.863088412352432,0.486405680325106,1.09824565275233,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,0.482443521363367,1.66277871149944,0,0,0,0,0.502518772325447,0,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.655453258862952,1.03610989119537,0.867894351489069,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0.161464426695906,0,0,0,0,0.18542530201051,3.41741761595705,0.206386867963223,2.03713980106683,2.26042148405629,2.87057878214153,3.88922894451088,1.35982743995084,1.25956307091292,2.21119958087078,0,0,0,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,5.6369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0,0.209718688851422,0,7.20075015644664,5.05617793005085,1.01362607645082,0.513554785824136,1.55904987573354,3.75956060901711,5.36439657909415,4.56742708175882,5.02144392393563,5.95702054694071,4.49620159264499,6.04957110821043,5.55509920216589,6.44619338990207,6.42822961998629,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0.231867835620421|short_description=p4@Arhgap30}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226652 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QMX7 | |||
|association_with_transcript=-18bp_to_ENSMUST00000056449,ENSMUST00000131607,ENSMUST00000135312_5end | |||
|cluster_id=chr1:173319051..173319066,+ | |||
|description=CAGE_peak_4_at_Arhgap30_5end | |||
|id=chr1:173319051..173319066,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.05e-09!12;CL:0000084!1.35e-08!11;CL:0000827!1.35e-08!11;CL:0002031!2.32e-08!25;CL:0000542!2.79e-08!13;CL:0000051!2.79e-08!13;CL:0000988!3.34e-08!32;CL:0002032!3.34e-08!32;CL:0000037!3.34e-08!32;CL:0000566!3.34e-08!32;CL:0000837!3.34e-08!32;CL:0000791!1.65e-07!9;CL:0000789!1.65e-07!9;CL:0002420!1.65e-07!9;CL:0002419!1.65e-07!9;CL:0000790!1.65e-07!9;CL:0000738!2.62e-07!17;CL:0002087!2.62e-07!17;CL:0000624!5.29e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.01e-19,12;CL:0000542,3.36e-17,13;CL:0000051,3.36e-17,13;CL:0000084,4.45e-17,11;CL:0000827,4.45e-17,11;CL:0002031,7.32e-15,25;CL:0000791,1.10e-14,9;CL:0000789,1.10e-14,9;CL:0002420,1.10e-14,9;CL:0002419,1.10e-14,9;CL:0000790,1.10e-14,9;CL:0000624,1.41e-13,8;CL:0000738,1.82e-12,17;CL:0002087,1.82e-12,17;CL:0000988,4.38e-12,32;CL:0002032,4.38e-12,32;CL:0000037,4.38e-12,32;CL:0000837,4.38e-12,32;CL:0000893,1.97e-10,6;CL:0002489,1.97e-10,6;CL:0000898,1.97e-10,6;CL:0000809,1.97e-10,6;CL:0000810,1.97e-10,6;CL:0000895,1.97e-10,6;CL:0000808,1.97e-10,6;CL:0000894,1.97e-10,6;CL:0000806,1.97e-10,6;CL:0000807,1.97e-10,6;CL:0000805,1.97e-10,6;CL:0002425,1.97e-10,6;CL:0002436,1.97e-10,6;CL:0002427,1.97e-10,6;CL:0002428,1.97e-10,6;CL:0002429,1.97e-10,6;CL:0002433,1.97e-10,6;CL:0002431,1.97e-10,6;CL:0002432,1.97e-10,6;CL:0002320,4.12e-08,46;CL:0000134,4.12e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.08e-07,3;DOID:4045,5.08e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.19e-18!48;UBERON:0002405!1.20e-17!70;UBERON:0002390!9.69e-17!45;UBERON:0003061!9.69e-17!45;UBERON:0004177!1.09e-14!29;UBERON:0005057!2.71e-13!51;UBERON:0003408!6.38e-12!24;UBERON:0002370!1.57e-11!23;UBERON:0000974!1.57e-11!23;UBERON:0004807!1.57e-11!23;UBERON:0005058!1.57e-11!23;UBERON:0003351!1.57e-11!23;UBERON:0009113!1.57e-11!23;UBERON:0003295!1.57e-11!23;UBERON:0009722!1.57e-11!23;UBERON:0005562!1.57e-11!23;UBERON:0007690!1.57e-11!23;UBERON:0006562!1.14e-10!24;UBERON:0001557!1.14e-10!24;UBERON:0001042!1.14e-10!24;UBERON:0008814!1.14e-10!24;UBERON:0009145!1.14e-10!24;UBERON:0001004!3.28e-09!42;UBERON:0000065!7.66e-09!41;UBERON:0000072!1.64e-08!27;UBERON:0001041!1.26e-07!92;UBERON:0002368!2.12e-07!60;UBERON:0005911!2.40e-07!69;UBERON:0000077!2.52e-07!97;UBERON:0002530!4.70e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.27e-29,29;UBERON:0005057,2.27e-29,29;UBERON:0002390,2.06e-26,45;UBERON:0003061,2.06e-26,45;UBERON:0002193,2.35e-26,48;UBERON:0002405,2.35e-26,48;UBERON:0002370,8.81e-24,23;UBERON:0000974,8.81e-24,23;UBERON:0004807,8.81e-24,23;UBERON:0005058,8.81e-24,23;UBERON:0003351,8.81e-24,23;UBERON:0009113,8.81e-24,23;UBERON:0003295,8.81e-24,23;UBERON:0009722,8.81e-24,23;UBERON:0005562,8.81e-24,23;UBERON:0007690,8.81e-24,23;UBERON:0000077,3.36e-23,35;UBERON:0006562,1.43e-22,24;UBERON:0003408,1.43e-22,24;UBERON:0001557,1.43e-22,24;UBERON:0001042,1.43e-22,24;UBERON:0008814,1.43e-22,24;UBERON:0009145,1.43e-22,24;UBERON:0000072,1.75e-19,27;UBERON:0000065,9.74e-14,41;UBERON:0007811,2.45e-13,36;UBERON:0001004,2.79e-13,42;UBERON:0003081,7.96e-12,87;UBERON:0000926,8.78e-11,120;UBERON:0004120,8.78e-11,120;UBERON:0006603,8.78e-11,120;UBERON:0000153,2.29e-10,43;UBERON:0001041,5.52e-09,80;UBERON:0000490,9.38e-09,66;UBERON:0002384,4.12e-08,46;UBERON:0003929,6.14e-08,55;UBERON:0002368,7.00e-07,60;UBERON:0005911,8.81e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,6.97265946584512,2.956563165185,3.7450324211519,4.10923123741212,4.22792442675283,6.67682846731702,6.55653018142481,0.999329285446988,2.42970320867791,0,9.77932712610537,7.54129384831563,10.1853516431527,0.255129870453209,2.38298282882125,1.30599894569468,0.799962113967033,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,10.4632907684227,10.1573594788094,9.42342739152837,18.8234076169925,15.0270006690858,13.5942898848723,0,0,0,0,0,0,0,0,0,10.0669563634642,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,5.43769555659061,0.148442139064825,0.173485326766136,0,0,0,0.23517741427141,0.125666591329675,0,0.578397427679647,0.884610551949874,0.161766849947409,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,0.599075622529601,1.19980546198682,0.762421362438388,0,0,0,0.173824320192276,0,0,0,0,1.7416975885413,0,0.210441855886474,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.432276099749388,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.667380422864376,0,0.674586337154561,0.405720242777006,0,0.50925170356284,0.863088412352432,0.486405680325106,1.09824565275233,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,0.482443521363367,1.66277871149944,0,0,0,0,0.502518772325447,0,0.195133647857799,0.472905432318573,0.44292937929755,0.318909537314974,0.655453258862952,1.03610989119537,0.867894351489069,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0,0,0.161464426695906,0,0,0,0,0.18542530201051,3.41741761595705,0.206386867963223,2.03713980106683,2.26042148405629,2.87057878214153,3.88922894451088,1.35982743995084,1.25956307091292,2.21119958087078,0,0,0,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,5.6369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0,0.209718688851422,0,7.20075015644664,5.05617793005085,1.01362607645082,0.513554785824136,1.55904987573354,3.75956060901711,5.36439657909415,4.56742708175882,5.02144392393563,5.95702054694071,4.49620159264499,6.04957110821043,5.55509920216589,6.44619338990207,6.42822961998629,0,0,0,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0.231867835620421 | |||
|short_description=p4@Arhgap30 | |||
}} |
Revision as of 06:11, 5 August 2015
Short description: | p4@Arhgap30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Arhgap30_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -18bp_to_ENSMUST00000056449, ENSMUST00000131607, ENSMUST00000135312_5end |
EntrezGene: | 226652 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.08e-07 | 3 |
muscle cancer | 5.08e-07 | 3 |