FFCP PHASE1:Hg19::chr6:163149104..163149130,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19152 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=72bp_to_ENST00000544266_5end | |||
|coexpression_cluster_id=C522 | |||
|description=CAGE_peak_3_at_PACRG_5end | |||
|id=chr6:163149104..163149130,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.12e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.21e-34!57;UBERON:0005068!3.21e-34!57;UBERON:0006241!3.21e-34!57;UBERON:0007135!3.21e-34!57;UBERON:0007023!6.96e-34!115;UBERON:0005743!1.02e-29!86;UBERON:0001017!1.83e-29!82;UBERON:0002780!3.93e-29!41;UBERON:0001890!3.93e-29!41;UBERON:0006240!3.93e-29!41;UBERON:0003080!3.96e-28!42;UBERON:0000073!5.57e-28!94;UBERON:0001016!5.57e-28!94;UBERON:0002616!1.61e-27!59;UBERON:0000955!1.11e-26!69;UBERON:0006238!1.11e-26!69;UBERON:0002346!1.06e-25!90;UBERON:0003075!1.25e-25!86;UBERON:0007284!1.25e-25!86;UBERON:0002020!2.64e-22!34;UBERON:0003528!2.64e-22!34;UBERON:0001893!5.67e-22!34;UBERON:0002791!2.46e-21!33;UBERON:0001869!1.78e-20!32;UBERON:0003056!5.87e-20!61;UBERON:0000153!3.15e-16!129;UBERON:0007811!3.15e-16!129;UBERON:0000924!1.32e-15!173;UBERON:0006601!1.32e-15!173;UBERON:0004121!2.96e-15!169;UBERON:0002619!3.13e-15!22;UBERON:0000033!1.40e-14!123;UBERON:0000956!6.23e-14!25;UBERON:0000203!6.23e-14!25;UBERON:0001950!2.36e-13!20;UBERON:0002308!1.98e-10!9;UBERON:0000125!1.98e-10!9;UBERON:0001894!5.99e-09!7;UBERON:0006222!5.99e-09!7;UBERON:0009663!1.40e-08!7;UBERON:0002420!2.61e-08!9;UBERON:0007245!2.61e-08!9;UBERON:0010009!2.61e-08!9;UBERON:0010011!2.61e-08!9;UBERON:0000454!2.61e-08!9;UBERON:0003076!2.05e-07!15;UBERON:0003057!2.05e-07!15;UBERON:0001871!7.51e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;9.00e-15;4!UBERON:0002435;9.00e-15;4!UBERON:0000204;9.00e-15;4!UBERON:0002420;8.90e-14;9!UBERON:0000125;8.90e-14;9!UBERON:0007245;8.90e-14;9!UBERON:0002308;8.90e-14;9!UBERON:0010009;8.90e-14;9!UBERON:0010011;8.90e-14;9!UBERON:0000454;8.90e-14;9!UBERON:0001894;2.48e-13;7!UBERON:0002780;6.61e-13;41!UBERON:0001890;6.61e-13;41!UBERON:0009663;1.09e-12;7!UBERON:0000073;3.46e-12;53!UBERON:0002616;3.46e-12;53!UBERON:0005383;1.14e-11;3!UBERON:0005382;1.14e-11;3!UBERON:0001896;1.56e-11;3!UBERON:0005290;1.56e-11;3!UBERON:0002298;8.70e-10;6!UBERON:0003296;2.61e-09;4!UBERON:0010133;2.61e-09;4!UBERON:0000007;3.49e-09;2!UBERON:0000341;5.14e-09;2!UBERON:0003127;5.35e-09;2!UBERON:0003528;5.79e-09;34!UBERON:0002020;5.79e-09;34!UBERON:0002791;9.57e-09;32!UBERON:0001869;2.11e-08;32!UBERON:0001873;3.12e-08;2!UBERON:0000955;5.63e-08;68!UBERON:0007023;9.62e-08;114!UBERON:0001893;3.93e-07;34!UBERON:0001017;6.07e-07;75!UBERON:0000349;8.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.41e-20,56;UBERON:0005068,2.41e-20,56;UBERON:0006241,2.41e-20,56;UBERON:0007135,2.41e-20,56;UBERON:0007023,6.95e-20,114;UBERON:0000073,2.32e-19,53;UBERON:0002616,2.32e-19,53;UBERON:0002780,9.58e-16,41;UBERON:0001890,9.58e-16,41;UBERON:0003080,9.58e-16,41;UBERON:0006240,9.58e-16,41;UBERON:0000369,4.89e-15,4;UBERON:0002435,4.89e-15,4;UBERON:0000204,4.89e-15,4;UBERON:0010082,4.89e-15,4;UBERON:0000125,5.62e-14,9;UBERON:0002308,5.62e-14,9;UBERON:0002420,6.61e-14,9;UBERON:0007245,6.61e-14,9;UBERON:0010009,6.61e-14,9;UBERON:0010011,6.61e-14,9;UBERON:0000454,6.61e-14,9;UBERON:0000955,7.05e-14,68;UBERON:0006238,7.05e-14,68;UBERON:0001894,1.90e-13,7;UBERON:0006222,1.90e-13,7;UBERON:0009663,8.17e-13,7;UBERON:0001017,1.92e-12,81;UBERON:0003075,1.92e-12,82;UBERON:0007284,1.92e-12,82;UBERON:0005383,6.27e-12,3;UBERON:0005382,6.27e-12,3;UBERON:0002346,1.18e-11,86;UBERON:0001896,1.35e-11,3;UBERON:0005290,1.35e-11,3;UBERON:0010096,1.35e-11,3;UBERON:0001016,9.13e-11,89;UBERON:0003528,6.41e-10,34;UBERON:0002020,6.41e-10,34;UBERON:0002298,6.51e-10,6;UBERON:0003056,1.45e-09,61;UBERON:0003296,2.37e-09,4;UBERON:0010133,2.37e-09,4;UBERON:0000007,3.50e-09,2;UBERON:0003127,5.37e-09,2;UBERON:0000341,5.37e-09,2;UBERON:0010371,7.26e-09,104;UBERON:0002791,9.91e-09,32;UBERON:0001869,9.91e-09,32;UBERON:0001873,1.80e-08,2;UBERON:0010122,1.80e-08,2;UBERON:0001893,3.98e-08,34;UBERON:0010314,7.00e-07,132;UBERON:0000349,7.27e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0.767658796194425,0.928896739896456,0,0,0,0.0774672005803016,0,1.17440175733939,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.76171156811282,0,0,0.560508562981536,0,0.393419540227666,0,1.02800749499755,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0.444859689486181,1.60524496853828,2.09071047609954,0,0.383220493601921,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,0.80642697289893,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0.378139268656271,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,1.03041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,2.16903884225481,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,1.40669416410513,0,0,0,2.98871982376605,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.89431452700979,0,0.552896299656123,0.295547618953547,0.658156191461918,0,0,0.692552326534174,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0.265372693510018,0,0,0,0,0.741412462787447,0,2.57690890297873,0,0,0.728341138602278,2.36750641709634,1.20990716048664,0.91821828489147,0.063186579628488,0.751617097072463,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0,0,0.677942222341597,0,0,0.759729551470544,0.391102765469606,0,0.213452994739353,0,0.144090417154106,0,1.02956998717179,0,0.124252535565433,0,0,0,0.101998217636322,0.288950589901519,1.20084057741958,0.821432273351958,0,0,0,0.558564802544508,0,0.717873024576814,0.599037001496973,1.71690419254628,1.11585728720936,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,1.63444087333891,0.643012593860077,0.412618309791701,0.415440338029185,0,0,0.789744236554321,0,1.26089131678717,3.93409411012486,0,0,0,0,0,3.5597595271665,0,0,0,0,0,0,0,0,0,1.68067843270016,0.52893040697076,0,0,5.44615804095243,20.2793553578569,7.45630299624952,0,0,0,0,0,0,0,0,0,0,0.976210119215705,1.001527445652,5.16068276121064,1.88579387612649,1.05563885000352,0.138348634936231,0,0.151649117541648,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0.247871528518004,0,0,0,3.20228299314188,0,0,1.34881372702565,0,0.319267718114302,0.615349092722265,0.252071696221718,0.207471757392654,1.61475645631851,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,2.70757182057326,0.20170506870352,0.781514011233092,0,0,0.147856086217045,0.270150338473579,0.781078098613847,0.826747186004736,0.507326481551255,1.09394961803644,0,0,0.175871244359621,0,1.60710550763486,0.336283722218824,15.7811057101524,19.123624073509,0,0,0,0.203909198930495,0.328863867814245,0,0,0.156986185701028,2.82808061848803,0,0,0,0,0.643288897589907,0,0.116241425368125,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0,0,0.4582137370881,0,0,1.00669888618013,0,0,0,0,0,0.485710993059139,0.467878926924211,8.7538341071002,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,10.3469805199535,0,0.471353094203252,0.392616934229891,0.594092800654172,2.9585900930838,0,0.0939839179798536,0,0,0.178553938605658,0,0.0802413666891683,0,0,0.286679166302903,0,0.883889372481891,1.74540276136151,0.5290268405154,0,0,0,0.378499274505237,0,0,0,0.26721740526556,0,0,0.909344378618873,1.33982065078089,1.65833887891756,0.930896962757057,5.11761556562354,11.1890282787958,0,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0,0,12.1210527113623,4.65724499164419,0,0,0,0,0,0.733448665097199,0.406896178315738,0,0,0 | |||
|short_description=p3@PACRG | |||
}} |
Revision as of 15:04, 22 January 2014
Short description: | p3@PACRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PACRG_5end |
Coexpression cluster: | C522_pituitary_medulla_lung_testis_caudate_epididymis_thyroid |
Association with transcript: | 72bp_to_ENST00000544266_5end |
EntrezGene: | PACRG |
HGNC: | 19152 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data