FFCP PHASE1:Hg19::chr6:101846679..101846702,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4580 | |||
|TSSclassifier=strong | |||
|UniProt=G3XAD3 | |||
|association_with_transcript=10bp_to_ENST00000358361_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_1_at_GRIK2_5end | |||
|id=chr6:101846679..101846702,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;5.32e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,5.05e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.74e-22;82!UBERON:0006215;3.84e-10;3!UBERON:0006241;2.86e-08;3!UBERON:0003057;2.86e-08;3!UBERON:0010122;2.95e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.71e-71!82;UBERON:0005743!4.49e-69!86;UBERON:0000073!5.24e-65!94;UBERON:0001016!5.24e-65!94;UBERON:0001049!1.16e-62!57;UBERON:0005068!1.16e-62!57;UBERON:0006241!1.16e-62!57;UBERON:0007135!1.16e-62!57;UBERON:0000955!3.56e-59!69;UBERON:0006238!3.56e-59!69;UBERON:0002616!4.81e-57!59;UBERON:0003075!2.41e-53!86;UBERON:0007284!2.41e-53!86;UBERON:0002346!4.31e-50!90;UBERON:0002780!1.78e-48!41;UBERON:0001890!1.78e-48!41;UBERON:0006240!1.78e-48!41;UBERON:0003080!5.02e-47!42;UBERON:0002020!1.49e-44!34;UBERON:0003528!1.49e-44!34;UBERON:0001893!1.81e-44!34;UBERON:0002791!5.75e-43!33;UBERON:0001869!5.19e-42!32;UBERON:0003056!4.83e-37!61;UBERON:0004121!1.67e-36!169;UBERON:0000924!4.02e-35!173;UBERON:0006601!4.02e-35!173;UBERON:0000033!5.39e-34!123;UBERON:0002619!2.33e-33!22;UBERON:0000153!1.64e-31!129;UBERON:0007811!1.64e-31!129;UBERON:0000956!3.13e-31!25;UBERON:0000203!3.13e-31!25;UBERON:0001950!2.54e-30!20;UBERON:0007023!3.96e-30!115;UBERON:0000025!8.82e-22!194;UBERON:0003076!4.36e-16!15;UBERON:0003057!4.36e-16!15;UBERON:0002420!3.81e-15!9;UBERON:0007245!3.81e-15!9;UBERON:0010009!3.81e-15!9;UBERON:0010011!3.81e-15!9;UBERON:0000454!3.81e-15!9;UBERON:0004111!8.27e-15!241;UBERON:0002308!1.07e-14!9;UBERON:0000125!1.07e-14!9;UBERON:0000483!5.37e-14!309;UBERON:0000119!1.20e-13!312;UBERON:0000475!2.36e-13!365;UBERON:0000477!3.06e-13!286;UBERON:0000064!7.79e-13!219;UBERON:0004733!2.63e-12!12;UBERON:0002028!2.63e-12!12;UBERON:0007277!2.63e-12!12;UBERON:0009663!6.19e-12!7;UBERON:0004732!3.73e-11!13;UBERON:0000200!8.93e-11!6;UBERON:0001871!1.04e-10!7;UBERON:0000349!1.83e-09!5;UBERON:0002298!3.13e-09!8;UBERON:0002021!3.79e-09!5;UBERON:0001872!3.85e-09!5;UBERON:0000062!6.52e-09!511;UBERON:0002680!1.34e-08!9;UBERON:0001895!1.34e-08!9;UBERON:0010092!1.34e-08!9;UBERON:0000467!2.73e-08!625;UBERON:0000480!3.16e-08!626;UBERON:0000369!3.69e-08!4;UBERON:0002435!3.69e-08!4;UBERON:0000204!3.69e-08!4;UBERON:0010082!3.69e-08!4;UBERON:0000468!4.45e-08!659;UBERON:0000923!8.55e-08!604;UBERON:0005291!8.55e-08!604;UBERON:0006598!8.55e-08!604;UBERON:0002532!8.55e-08!604;UBERON:0000922!8.99e-08!612;UBERON:0002050!9.85e-08!605;UBERON:0005423!9.85e-08!605;UBERON:0000481!1.79e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.22e-64;32!UBERON:0001893;5.03e-62;34!UBERON:0003528;9.19e-62;34!UBERON:0002020;9.19e-62;34!UBERON:0002791;1.55e-60;32!UBERON:0002780;1.19e-56;41!UBERON:0001890;1.19e-56;41!UBERON:0002619;3.30e-56;22!UBERON:0000073;2.31e-54;53!UBERON:0002616;2.31e-54;53!UBERON:0000956;2.83e-53;25!UBERON:0000203;2.83e-53;25!UBERON:0001950;5.35e-51;20!UBERON:0001017;4.00e-42;75!UBERON:0000955;3.59e-39;68!UBERON:0001016;8.58e-34;83!UBERON:0002420;3.72e-20;9!UBERON:0007245;3.72e-20;9!UBERON:0010009;3.72e-20;9!UBERON:0010011;3.72e-20;9!UBERON:0000454;3.72e-20;9!UBERON:0000125;1.79e-19;9!UBERON:0002308;1.79e-19;9!UBERON:0004733;2.53e-17;12!UBERON:0002028;2.53e-17;12!UBERON:0000200;3.48e-17;6!UBERON:0004732;7.58e-16;13!UBERON:0002298;2.36e-15;6!UBERON:0000349;5.12e-15;5!UBERON:0001871;7.01e-15;6!UBERON:0009663;8.58e-15;7!UBERON:0001872;1.78e-14;5!UBERON:0002021;2.05e-14;5!UBERON:0007023;7.18e-14;114!UBERON:0011216;7.03e-13;132!UBERON:0000369;8.39e-13;4!UBERON:0002435;8.39e-13;4!UBERON:0000204;8.39e-13;4!UBERON:0002680;3.44e-11;9!UBERON:0001895;3.44e-11;9!UBERON:0005383;4.44e-10;3!UBERON:0005382;4.44e-10;3!UBERON:0001870;1.38e-09;3!UBERON:0001894;1.72e-09;7!UBERON:0000988;8.70e-09;3!UBERON:0002240;2.86e-08;3!UBERON:0005174;2.86e-08;3!UBERON:0001137;2.86e-08;3!UBERON:0001896;2.94e-08;3!UBERON:0005290;2.94e-08;3!UBERON:0010314;1.05e-07;132!UBERON:0001873;2.95e-07;2!UBERON:0001876;3.52e-07;2!UBERON:0002771;5.60e-07;2!UBERON:0003688;6.26e-07;6!UBERON:0002358;6.26e-07;6!UBERON:0003684;6.26e-07;6!UBERON:0001178;6.26e-07;6!UBERON:0002702;6.46e-07;2!UBERON:0001954;8.84e-07;2!UBERON:0003022;8.84e-07;2!UBERON:0002421;8.84e-07;2!UBERON:0002600;8.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.13e-103,56;UBERON:0005068,4.13e-103,56;UBERON:0006241,4.13e-103,56;UBERON:0007135,4.13e-103,56;UBERON:0001017,9.88e-97,81;UBERON:0000073,4.73e-96,53;UBERON:0002616,4.73e-96,53;UBERON:0001016,1.56e-92,89;UBERON:0000955,2.63e-89,68;UBERON:0006238,2.63e-89,68;UBERON:0002780,2.65e-79,41;UBERON:0001890,2.65e-79,41;UBERON:0003080,2.65e-79,41;UBERON:0006240,2.65e-79,41;UBERON:0003075,1.74e-72,82;UBERON:0007284,1.74e-72,82;UBERON:0001869,8.40e-72,32;UBERON:0003528,9.19e-72,34;UBERON:0002020,9.19e-72,34;UBERON:0001893,1.27e-71,34;UBERON:0002346,1.56e-68,86;UBERON:0002791,7.27e-67,32;UBERON:0002619,2.90e-56,22;UBERON:0010371,1.74e-54,104;UBERON:0000956,2.84e-53,25;UBERON:0000203,2.84e-53,25;UBERON:0003056,3.72e-53,61;UBERON:0001950,4.70e-51,20;UBERON:0004121,2.65e-45,171;UBERON:0000924,2.65e-45,171;UBERON:0006601,2.65e-45,171;UBERON:0007023,1.26e-44,114;UBERON:0010314,2.83e-42,132;UBERON:0011216,3.43e-34,223;UBERON:0000025,4.67e-26,192;UBERON:0003076,1.30e-23,15;UBERON:0003057,1.30e-23,15;UBERON:0002420,4.06e-20,9;UBERON:0007245,4.06e-20,9;UBERON:0010009,4.06e-20,9;UBERON:0010011,4.06e-20,9;UBERON:0000454,4.06e-20,9;UBERON:0000125,1.96e-19,9;UBERON:0002308,1.96e-19,9;UBERON:0004111,3.17e-18,240;UBERON:0004733,2.74e-17,12;UBERON:0002028,2.74e-17,12;UBERON:0007277,2.74e-17,12;UBERON:0000200,3.03e-17,6;UBERON:0004732,8.16e-16,13;UBERON:0002298,2.62e-15,6;UBERON:0000349,5.19e-15,5;UBERON:0001871,6.69e-15,6;UBERON:0009663,9.33e-15,7;UBERON:0002021,1.78e-14,5;UBERON:0001872,1.83e-14,5;UBERON:0000369,8.52e-13,4;UBERON:0002435,8.52e-13,4;UBERON:0000204,8.52e-13,4;UBERON:0010082,8.52e-13,4;UBERON:0000483,3.11e-12,306;UBERON:0000119,5.44e-12,309;UBERON:0002680,3.50e-11,9;UBERON:0001895,3.50e-11,9;UBERON:0010092,3.50e-11,9;UBERON:0005383,4.44e-10,3;UBERON:0005382,4.44e-10,3;UBERON:0001870,1.44e-09,3;UBERON:0001894,2.05e-09,7;UBERON:0006222,2.05e-09,7;UBERON:0000923,5.44e-09,560;UBERON:0010316,5.44e-09,560;UBERON:0005291,5.44e-09,560;UBERON:0006598,5.44e-09,560;UBERON:0010317,5.44e-09,560;UBERON:0002532,5.44e-09,560;UBERON:0002050,8.19e-09,564;UBERON:0000988,8.94e-09,3;UBERON:0002240,2.94e-08,3;UBERON:0005174,2.94e-08,3;UBERON:0001137,2.94e-08,3;UBERON:0001896,3.18e-08,3;UBERON:0005290,3.18e-08,3;UBERON:0010096,3.18e-08,3;UBERON:0000922,3.34e-08,592;UBERON:0005423,4.38e-08,581;UBERON:0001873,2.95e-07,2;UBERON:0010122,2.95e-07,2;UBERON:0001876,3.52e-07,2;UBERON:0002771,5.14e-07,2;UBERON:0003688,6.05e-07,6;UBERON:0002358,6.05e-07,6;UBERON:0003684,6.05e-07,6;UBERON:0001178,6.05e-07,6;UBERON:0002702,6.65e-07,2;UBERON:0001954,8.84e-07,2;UBERON:0003022,8.84e-07,2;UBERON:0002421,8.84e-07,2;UBERON:0002600,8.84e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,6.70441641640932,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,1.09499540058307,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0.49333509683432,0,0.538842688278752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,3.90419561572865,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,0.561320188866147,1.28139149255701,2.55853624533352,2.89537058058494,1.48418066444991,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0.949138274156178,0.762520775695299,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,1.29070216983646,0.687743287091848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,17.8946576597934,17.5836770513141,0,0,0,0,0,0,3.06806047506464,0,0,0,0,0,0,0,0,5.81599647657131,7.51421595110995,3.99227596002388,0,0,0,0,0,0,0,0,0,29.2294657318567,30.752091849479,56.4552424373208,61.9243855614858,23.0527142783767,5.48463492884931,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.95463285643963,0,5.3880822516828,0,0,0,0,0,8.57003732565372,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,1.80784592624426,0,0,13.4851995386022,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,7.80166592734101,5.4037825983881,5.06549901900374,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0,0,1.44119953416961,0,0,0,0,0,0,10.3379859675209,9.80664524003344,0,2.88832816854191,2.49264202817511,0,0,16.6453785242988,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,5.55916712354667,7.14056049410526,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,11.5188863395708,13.6669416690199,13.3954295855955,1.14681839138014,4.21530395840039,4.03626619118992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621748802331122,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0.906823702049089,0,0,0,0,0,0.176689145945881,0,0,0,0,0,13.9641020513248,0,0,0,0,0,0,0,0,34.4429959321631,0,3.12980115428129,0,0,0,1.94084660514027,0,8.51835177897708,0,0,0,0,0,0,0,0,0,16.2499939494043,15.5866233958143,6.8642559394575,10.4609345762785,12.0994414186425,8.92128556788411,13.7254298787073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57727324653612,8.59185908475232,13.0212681795746,8.49771856598351,14.2213450344737,0,0,0,0,0,0,3.03482802118316,11.3831095675649,0,0.115233987555779,0,6.11727596791485,8.68200611029608,0,0,0,31.2660023932844,0,0.913158720509496,0,0,1.07214816264985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0,0,3.14093547383912,2.37637120261669,3.8039015482506,0,0,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0,9.45081713653714,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,8.17120667308972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@GRIK2 | |||
}} |
Revision as of 13:07, 22 January 2014
Short description: | p1@GRIK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIK2_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 10bp_to_ENST00000358361_5end |
EntrezGene: | GRIK2 |
HGNC: | 4580 |
UniProt: | G3XAD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 5.05e-08 | 3 |