FFCP PHASE1:Hg19::chr5:142065646..142065665,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3665 | |||
|TSSclassifier=strong | |||
|UniProt=P05230 | |||
|association_with_transcript=0bp_to_NM_000800,uc003lmn.3_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_FGF1_5end | |||
|id=chr5:142065646..142065665,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.04e-23;82!UBERON:0006241;4.16e-08;3!UBERON:0003057;4.16e-08;3!UBERON:0006215;1.80e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.31e-65!115;UBERON:0001049!1.90e-56!57;UBERON:0005068!1.90e-56!57;UBERON:0006241!1.90e-56!57;UBERON:0007135!1.90e-56!57;UBERON:0001017!9.08e-56!82;UBERON:0005743!6.12e-54!86;UBERON:0000073!5.89e-52!94;UBERON:0001016!5.89e-52!94;UBERON:0002616!1.34e-46!59;UBERON:0000955!1.69e-46!69;UBERON:0006238!1.69e-46!69;UBERON:0002780!2.56e-45!41;UBERON:0001890!2.56e-45!41;UBERON:0006240!2.56e-45!41;UBERON:0003075!3.69e-45!86;UBERON:0007284!3.69e-45!86;UBERON:0003080!7.27e-44!42;UBERON:0002346!4.35e-42!90;UBERON:0000153!6.19e-38!129;UBERON:0007811!6.19e-38!129;UBERON:0004121!6.62e-38!169;UBERON:0000033!8.82e-38!123;UBERON:0001893!2.63e-37!34;UBERON:0002020!2.73e-37!34;UBERON:0003528!2.73e-37!34;UBERON:0000924!2.59e-36!173;UBERON:0006601!2.59e-36!173;UBERON:0002791!4.43e-36!33;UBERON:0001869!1.12e-34!32;UBERON:0003056!5.27e-34!61;UBERON:0000956!2.17e-26!25;UBERON:0000203!2.17e-26!25;UBERON:0002619!5.23e-24!22;UBERON:0001950!1.07e-21!20;UBERON:0003076!2.69e-13!15;UBERON:0003057!2.69e-13!15;UBERON:0002308!2.58e-12!9;UBERON:0000125!2.58e-12!9;UBERON:0002420!5.10e-12!9;UBERON:0007245!5.10e-12!9;UBERON:0010009!5.10e-12!9;UBERON:0010011!5.10e-12!9;UBERON:0000454!5.10e-12!9;UBERON:0004111!6.02e-12!241;UBERON:0000477!2.54e-11!286;UBERON:0004732!3.63e-11!13;UBERON:0000025!1.36e-10!194;UBERON:0000481!4.78e-10!347;UBERON:0004733!5.77e-10!12;UBERON:0002028!5.77e-10!12;UBERON:0007277!5.77e-10!12;UBERON:0009663!7.40e-10!7;UBERON:0001894!2.77e-09!7;UBERON:0006222!2.77e-09!7;UBERON:0000475!5.24e-09!365;UBERON:0000062!6.95e-09!511;UBERON:0000064!9.76e-09!219;UBERON:0002298!9.98e-09!8;UBERON:0000200!2.65e-08!6;UBERON:0001871!8.29e-08!7;UBERON:0000922!1.37e-07!612;UBERON:0000483!2.03e-07!309;UBERON:0000349!2.74e-07!5;UBERON:0000467!3.76e-07!625;UBERON:0000119!3.82e-07!312;UBERON:0000480!4.45e-07!626;UBERON:0002050!4.65e-07!605;UBERON:0005423!4.65e-07!605;UBERON:0002021!5.09e-07!5;UBERON:0001872!8.07e-07!5;UBERON:0000923!9.25e-07!604;UBERON:0005291!9.25e-07!604;UBERON:0006598!9.25e-07!604;UBERON:0002532!9.25e-07!604;UBERON:0000468!9.75e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.51e-51;41!UBERON:0001890;1.51e-51;41!UBERON:0000073;7.78e-50;53!UBERON:0002616;7.78e-50;53!UBERON:0001893;4.01e-49;34!UBERON:0003528;1.23e-48;34!UBERON:0002020;1.23e-48;34!UBERON:0002791;5.78e-48;32!UBERON:0001869;8.21e-48;32!UBERON:0002619;1.99e-40;22!UBERON:0000956;2.58e-38;25!UBERON:0000203;2.58e-38;25!UBERON:0001950;3.79e-36;20!UBERON:0001017;7.92e-34;75!UBERON:0000955;5.44e-31;68!UBERON:0001016;3.23e-29;83!UBERON:0000125;1.62e-21;9!UBERON:0002308;1.62e-21;9!UBERON:0002420;5.73e-21;9!UBERON:0007245;5.73e-21;9!UBERON:0010009;5.73e-21;9!UBERON:0010011;5.73e-21;9!UBERON:0000454;5.73e-21;9!UBERON:0004732;1.85e-17;13!UBERON:0009663;5.91e-17;7!UBERON:0007023;8.68e-17;114!UBERON:0001894;7.48e-16;7!UBERON:0002298;2.56e-15;6!UBERON:0004733;2.76e-15;12!UBERON:0002028;2.76e-15;12!UBERON:0000200;4.62e-14;6!UBERON:0000349;3.38e-12;5!UBERON:0002021;9.58e-12;5!UBERON:0011216;1.27e-11;132!UBERON:0001871;1.42e-11;6!UBERON:0000369;5.65e-10;4!UBERON:0002435;5.65e-10;4!UBERON:0000204;5.65e-10;4!UBERON:0002784;7.19e-10;4!UBERON:0002680;2.83e-09;9!UBERON:0001895;2.83e-09;9!UBERON:0003296;5.60e-09;4!UBERON:0010133;5.60e-09;4!UBERON:0010314;6.35e-09;132!UBERON:0000988;1.40e-08;3!UBERON:0001896;2.01e-08;3!UBERON:0005290;2.01e-08;3!UBERON:0002240;4.16e-08;3!UBERON:0005174;4.16e-08;3!UBERON:0001137;4.16e-08;3!UBERON:0001872;4.71e-08;5!UBERON:0001870;7.38e-08;3!UBERON:0005383;9.62e-08;3!UBERON:0005382;9.62e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.75e-94,56;UBERON:0005068,3.75e-94,56;UBERON:0006241,3.75e-94,56;UBERON:0007135,3.75e-94,56;UBERON:0001017,6.81e-89,81;UBERON:0001016,1.37e-87,89;UBERON:0000073,2.44e-87,53;UBERON:0002616,2.44e-87,53;UBERON:0000955,2.08e-73,68;UBERON:0006238,2.08e-73,68;UBERON:0002780,7.76e-73,41;UBERON:0001890,7.76e-73,41;UBERON:0003080,7.76e-73,41;UBERON:0006240,7.76e-73,41;UBERON:0003075,7.28e-71,82;UBERON:0007284,7.28e-71,82;UBERON:0002346,7.06e-67,86;UBERON:0007023,5.38e-60,114;UBERON:0001893,4.57e-58,34;UBERON:0003528,4.86e-58,34;UBERON:0002020,4.86e-58,34;UBERON:0002791,1.98e-53,32;UBERON:0001869,2.78e-53,32;UBERON:0010371,1.04e-52,104;UBERON:0003056,3.80e-51,61;UBERON:0004121,3.08e-47,171;UBERON:0000924,3.08e-47,171;UBERON:0006601,3.08e-47,171;UBERON:0010314,4.66e-47,132;UBERON:0002619,2.33e-40,22;UBERON:0000956,3.32e-38,25;UBERON:0000203,3.32e-38,25;UBERON:0001950,4.44e-36,20;UBERON:0011216,1.15e-34,223;UBERON:0000025,1.48e-22,192;UBERON:0000125,1.66e-21,9;UBERON:0002308,1.66e-21,9;UBERON:0003076,2.37e-21,15;UBERON:0003057,2.37e-21,15;UBERON:0002420,5.88e-21,9;UBERON:0007245,5.88e-21,9;UBERON:0010009,5.88e-21,9;UBERON:0010011,5.88e-21,9;UBERON:0000454,5.88e-21,9;UBERON:0004111,2.68e-19,240;UBERON:0004732,1.85e-17,13;UBERON:0009663,6.07e-17,7;UBERON:0001894,7.00e-16,7;UBERON:0006222,7.00e-16,7;UBERON:0002298,2.56e-15,6;UBERON:0004733,2.76e-15,12;UBERON:0002028,2.76e-15,12;UBERON:0007277,2.76e-15,12;UBERON:0000200,4.58e-14,6;UBERON:0000349,3.43e-12,5;UBERON:0002021,1.07e-11,5;UBERON:0001871,1.47e-11,6;UBERON:0000483,8.97e-11,306;UBERON:0000119,1.57e-10,309;UBERON:0000369,5.79e-10,4;UBERON:0002435,5.79e-10,4;UBERON:0000204,5.79e-10,4;UBERON:0010082,5.79e-10,4;UBERON:0002784,6.64e-10,4;UBERON:0002680,2.83e-09,9;UBERON:0001895,2.83e-09,9;UBERON:0010092,2.83e-09,9;UBERON:0003296,5.31e-09,4;UBERON:0010133,5.31e-09,4;UBERON:0000988,1.40e-08,3;UBERON:0001896,2.01e-08,3;UBERON:0005290,2.01e-08,3;UBERON:0010096,2.01e-08,3;UBERON:0002240,4.21e-08,3;UBERON:0005174,4.21e-08,3;UBERON:0001137,4.21e-08,3;UBERON:0001872,4.71e-08,5;UBERON:0001870,7.38e-08,3;UBERON:0005383,9.73e-08,3;UBERON:0005382,9.73e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,1.14494394852423,0.684372125364421,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01070328508712,1.01392563272577,61.2370179229346,48.176852159961,0.567208902984407,0.443458794925128,0.175669571386252,7.98972360536047,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.447792613514241,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,13.9752043322355,2.60279707715243,3.86644406388848,1.17261385734044,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,1.80455823272956,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.27470839445503,0.742585499285292,0,0,0,0.290012154876366,0,0,0,0,0,0,0.178064071293475,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,24.8536911941574,39.9501142605856,0.111308705022906,0,0,1.39473591775749,0,0,1.53403023753232,0,0,0,0,0,0.0986434056369336,0,0,30.0493151289518,53.4344245412263,0,0,0,0,0.1137934482855,0.508507300585533,0,1.03423011972439,0,0.173624994933292,34.5439140467397,36.9025102193748,12.2065389053667,22.7793275458323,21.8705238025625,25.6680914670148,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,186.094528159649,0,109.401496153733,0,0.391329237864179,0,0.394584402849391,0,2.14250933141343,1.51647791108371,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.387956065953678,0,2.03382666702479,0.411125773940253,0,55.7768112371291,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0.815985741090574,0,69.0483332016258,112.67312682811,0,0,0,1.11712960508902,1.83328339209347,0,0.798716001995964,2.14613024068285,1.33902874465124,2.75452237195578,0,0,0,0,0,0,0,32.6044172821814,67.1482792130068,0,0.137539436597234,0,0,0,51.3941249326889,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,72.6570214751914,71.670070144538,0,0,0,0.157204305099666,0,0,0,0,0,7.07223144380316,1.2534494701135,3.67614692116154,0.983617892129413,0,18.6074317793067,20.3783862386278,43.8168257472749,44.1525080681355,82.1984271888075,124.875866315122,0,0.124980407962107,0,0.856396000634902,0,0,0,0,0,0,0.947015026375446,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,52.2616888653542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04867141653695,0,2.07498312564826,0,0,0,0,0,0,0,0,0,63.2657867200126,12.7526918693026,65.7691499315463,38.7669928415027,2.01657356977374,51.7987820956992,48.1197423982916,139.914031853971,0,0,0.366857197043358,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0,0,61.5267395873575,28.1188115500985,42.7841668757451,68.4890750094194,0.546974809018219,0.548257766857182,0.992422356778588,0,0.255524855279191,2.67850917939143,7.0619581665953,4.24875922965642,3.41493287026946,0.177404740325278,0,0.171488009437418,93.7302617750509,45.6463048526173,0,0,0.706437835654626,30.0090776739564,0,2.73947616152849,0,0,2.35872595782966,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0.596852325484105,0,0,0,0,0.463044948647668,0.874238242015829,0,0.980593287015622,0,54.1811369237249,88.2227808971445,21.13278637917,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,143.626262317754,0,46.9141282317311,2.61810414204226,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.535928260312357,63.846046838326,128.567213856336,0.426467963801962,0,0.129177819672012,0.0620747142958579,0.112131862580613,0.190941474834495,0.202117188958219,1.52401723527873,1.02669990325584,0.80822463617505,0.932388670104793,0.665320713092027,0,0,0,0,0,0.244482888365733,0.813792356631477,1.33151354837103,1.40891655513718,0 | |||
|short_description=p2@FGF1 | |||
}} |
Revision as of 07:58, 22 January 2014
Short description: | p2@FGF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FGF1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_NM_000800, uc003lmn.3_5end |
EntrezGene: | FGF1 |
HGNC: | 3665 |
UniProt: | P05230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data