FFCP PHASE1:Hg19::chr4:1198912..1198923,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000515553_5end | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_19_at_SPON2_5end | |||
|id=chr4:1198912..1198923,- | |||
|ontology_enrichment_celltype=CL:0000181!1.15e-16!12;CL:0000417!1.15e-16!12;CL:0000668!1.15e-16!12;CL:0000414!1.15e-16!12;CL:0000412!1.15e-16!12;CL:0000182!1.15e-16!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.31e-35;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.63e-35,12;CL:0000223,6.16e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.73e-38;11!UBERON:0009497;4.17e-32;13!UBERON:0001041;1.61e-17;30!UBERON:0003104;8.54e-17;31!CL:0000223;4.06e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.64e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:5662;3.55e-10;1!DOID:7;2.27e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.30e-10,1;DOID:7,1.22e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.57e-24!155;UBERON:0001555!3.57e-24!155;UBERON:0007026!3.57e-24!155;UBERON:0004921!4.45e-23!129;UBERON:0004185!4.45e-23!129;UBERON:0004119!2.69e-21!169;UBERON:0000925!2.69e-21!169;UBERON:0006595!2.69e-21!169;UBERON:0001737!1.52e-20!9;UBERON:0001041!1.75e-20!98;UBERON:0009497!5.72e-19!25;UBERON:0000015!5.72e-19!25;UBERON:0002423!5.72e-19!25;UBERON:0006235!5.72e-19!25;UBERON:0004161!5.72e-19!25;UBERON:0000077!1.97e-18!130;UBERON:0009856!2.38e-18!26;UBERON:0009854!6.29e-18!23;UBERON:0007499!2.22e-16!25;UBERON:0008835!6.74e-16!22;UBERON:0003894!6.74e-16!22;UBERON:0002107!1.34e-15!19;UBERON:0006925!1.34e-15!19;UBERON:0008836!1.34e-15!19;UBERON:0001557!8.17e-14!19;UBERON:0005057!7.16e-13!26;UBERON:0005409!2.09e-11!35;UBERON:0000481!2.35e-11!347;UBERON:0000160!3.34e-11!27;UBERON:0000949!7.23e-11!45;UBERON:0001048!1.34e-10!168;UBERON:0003104!1.12e-09!238;UBERON:0009142!1.12e-09!238;UBERON:0002108!2.12e-09!14;UBERON:0005172!2.24e-09!55;UBERON:0005173!2.24e-09!55;UBERON:0002365!1.06e-08!31;UBERON:0002330!1.06e-08!31;UBERON:0005177!1.65e-08!107;UBERON:0003929!2.85e-08!54;UBERON:0002417!4.14e-08!61;UBERON:0000916!4.14e-08!61;UBERON:0002368!1.83e-07!35;UBERON:0008947!2.53e-07!38;UBERON:0003258!2.53e-07!38;UBERON:0002075!3.09e-07!18;UBERON:0005911!6.58e-07!82;UBERON:0001045!7.50e-07!11;UBERON:0000072!9.23e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.82e-36;19!UBERON:0006925;3.82e-36;19!UBERON:0002423;3.48e-27;25!UBERON:0002365;4.86e-21;31!UBERON:0002330;4.86e-21;31!UBERON:0002368;1.83e-18;33!UBERON:0000949;2.79e-18;43!UBERON:0005172;1.51e-09;52!UBERON:0005173;1.51e-09;52!UBERON:0002417;2.02e-09;58!UBERON:0000916;2.02e-09;58!UBERON:0001007;2.04e-08;81!UBERON:0000160;5.86e-08;17!UBERON:0002108;7.63e-08;4!UBERON:0002530;6.37e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.99e-36,19;UBERON:0006925,3.99e-36,19;UBERON:0008836,3.99e-36,19;UBERON:0007499,1.89e-33,25;UBERON:0009856,4.15e-32,26;UBERON:0008835,4.87e-31,22;UBERON:0003894,4.87e-31,22;UBERON:0009854,1.23e-29,23;UBERON:0009497,3.60e-27,25;UBERON:0000015,3.60e-27,25;UBERON:0002423,3.60e-27,25;UBERON:0006235,3.60e-27,25;UBERON:0004161,3.60e-27,25;UBERON:0002365,1.13e-21,31;UBERON:0002330,1.13e-21,31;UBERON:0000949,1.24e-21,45;UBERON:0002368,4.68e-19,35;UBERON:0005172,9.99e-15,54;UBERON:0005173,9.99e-15,54;UBERON:0002417,4.22e-13,60;UBERON:0000916,4.22e-13,60;UBERON:0005177,2.40e-12,101;UBERON:0004921,5.43e-12,118;UBERON:0003929,6.67e-12,54;UBERON:0002530,8.76e-11,59;UBERON:0001007,2.51e-09,145;UBERON:0001555,2.51e-09,145;UBERON:0007026,2.51e-09,145;UBERON:0005911,3.80e-09,82;UBERON:0001041,1.56e-08,87;UBERON:0004119,3.12e-08,160;UBERON:0000925,3.12e-08,160;UBERON:0006595,3.12e-08,160;UBERON:0000160,6.03e-08,17;UBERON:0002108,7.51e-08,4;UBERON:0009569,1.10e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.946454400318751,0.337169380156203,0.723033089650446,0.992645754591546,0.871517776369625,0,0.404493924480493,0.588664395376038,0.38474715694639,0,0,0,0,6.33775174109154,0.982827216677626,3.54473944008842,0,0.122988438543114,0,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0.716084698702437,0,0,0,0,0.969332746095218,0,0,0,0,0,0,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0.664653872707185,0.661983911750998,1.2557316736289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.52106183383116,3.87354534391482,2.83094884187577,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,1.32506888912221,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0,0,0,0,0,0,0,0,2.37520350340484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,1.389134845943,2.40415516554353,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,1.3473780315988,0,0,0,0,0,0 | |||
|short_description=p19@SPON2 | |||
}} |
Revision as of 23:47, 21 January 2014
Short description: | p19@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SPON2_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | -30bp_to_ENST00000515553_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.63e-35 | 12 |
endodermal cell | 6.16e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.99e-36 | 19 |
digestive gland | 3.99e-36 | 19 |
liver bud | 3.99e-36 | 19 |
epithelial sac | 1.89e-33 | 25 |
sac | 4.15e-32 | 26 |
hepatic diverticulum | 4.87e-31 | 22 |
liver primordium | 4.87e-31 | 22 |
digestive tract diverticulum | 1.23e-29 | 23 |
epithelium of foregut-midgut junction | 3.60e-27 | 25 |
anatomical boundary | 3.60e-27 | 25 |
hepatobiliary system | 3.60e-27 | 25 |
foregut-midgut junction | 3.60e-27 | 25 |
septum transversum | 3.60e-27 | 25 |
exocrine gland | 1.13e-21 | 31 |
exocrine system | 1.13e-21 | 31 |
endocrine system | 1.24e-21 | 45 |
endocrine gland | 4.68e-19 | 35 |
abdomen element | 9.99e-15 | 54 |
abdominal segment element | 9.99e-15 | 54 |
abdominal segment of trunk | 4.22e-13 | 60 |
abdomen | 4.22e-13 | 60 |
trunk region element | 2.40e-12 | 101 |
subdivision of digestive tract | 5.43e-12 | 118 |
gut epithelium | 6.67e-12 | 54 |
gland | 8.76e-11 | 59 |
digestive system | 2.51e-09 | 145 |
digestive tract | 2.51e-09 | 145 |
primitive gut | 2.51e-09 | 145 |
endo-epithelium | 3.80e-09 | 82 |
foregut | 1.56e-08 | 87 |
endoderm-derived structure | 3.12e-08 | 160 |
endoderm | 3.12e-08 | 160 |
presumptive endoderm | 3.12e-08 | 160 |
intestine | 6.03e-08 | 17 |
small intestine | 7.51e-08 | 4 |
subdivision of trunk | 1.10e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.30e-10 | 1 |
disease of anatomical entity | 1.22e-07 | 39 |