FFCP PHASE1:Mm9::chr14:28051204..28051232,+: Difference between revisions
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{{FFCP|EntrezGene=71704|HGNC=|MCL_coexpression_id=2898|UniProt=Q91X46|association_with_transcript=0bp_to_ENSMUST00000049206,NM_027871,uc007stp.1_5end|description=CAGE_peak_2_at_Arhgef3_5end|id=chr14:28051204..28051232,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,8.95e-07,9;CL:0000789,8.95e-07,9;CL:0002420,8.95e-07,9;CL:0002419,8.95e-07,9;CL:0000790,8.95e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!9.89e-12!42;UBERON:0000065!1.78e-11!41;UBERON:0000926!2.13e-09!193;UBERON:0004120!2.13e-09!193;UBERON:0006603!2.13e-09!193;UBERON:0003104!9.77e-09!131;UBERON:0009142!9.77e-09!131;UBERON:0004177!1.48e-08!29;UBERON:0005157!1.99e-08!27;UBERON:0006562!4.54e-08!24;UBERON:0001557!4.54e-08!24;UBERON:0001042!4.54e-08!24;UBERON:0008814!4.54e-08!24;UBERON:0009145!4.54e-08!24;UBERON:0003408!6.26e-08!24;UBERON:0002370!1.07e-07!23;UBERON:0000974!1.07e-07!23;UBERON:0004807!1.07e-07!23;UBERON:0005058!1.07e-07!23;UBERON:0003351!1.07e-07!23;UBERON:0009113!1.07e-07!23;UBERON:0003295!1.07e-07!23;UBERON:0009722!1.07e-07!23;UBERON:0005562!1.07e-07!23;UBERON:0007690!1.07e-07!23;UBERON:0000077!1.22e-07!97;UBERON:0002048!1.89e-07!14;UBERON:0000117!1.89e-07!14;UBERON:0000171!1.89e-07!14;UBERON:0000170!1.89e-07!14;UBERON:0005597!1.89e-07!14;UBERON:0000118!1.89e-07!14;UBERON:0001041!2.47e-07!92;UBERON:0005153!2.74e-07!17;UBERON:0003081!6.30e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.89e-12,42;UBERON:0000065,3.47e-12,41;UBERON:0000077,1.80e-09,35;UBERON:0004177,3.31e-09,29;UBERON:0005057,3.31e-09,29;UBERON:0006562,1.00e-08,24;UBERON:0001557,1.00e-08,24;UBERON:0001042,1.00e-08,24;UBERON:0008814,1.00e-08,24;UBERON:0009145,1.00e-08,24;UBERON:0003408,1.41e-08,24;UBERON:0002370,2.44e-08,23;UBERON:0000974,2.44e-08,23;UBERON:0004807,2.44e-08,23;UBERON:0005058,2.44e-08,23;UBERON:0003351,2.44e-08,23;UBERON:0009113,2.44e-08,23;UBERON:0003295,2.44e-08,23;UBERON:0009722,2.44e-08,23;UBERON:0005562,2.44e-08,23;UBERON:0007690,2.44e-08,23;UBERON:0001041,1.46e-07,80;UBERON:0002048,2.69e-07,14;UBERON:0000117,2.69e-07,14;UBERON:0000171,2.69e-07,14;UBERON:0000170,2.69e-07,14;UBERON:0005597,2.69e-07,14;UBERON:0000118,2.69e-07,14;UBERON:0005153,3.64e-07,17;UBERON:0003081,7.24e-07,87|phase1_expression=0,0,0,0,0,0,0,91.2901896731944,40.4063632575284,49.8557441065846,10.9579499664323,8.29630453551499,111.965277375009,109.100662218909,3.66420737997229,5.87178275430495,0,17.192688012024,19.0589062711977,7.21462408056651,13.6919697143222,0.496454756004426,0,0.639969691173627,0.91763712426868,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04017381807851,106.628234875668,75.9571986061969,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,1.10115880999389,1.65993539510744,1.22885226604995,0.263772575460388,0.457438218012048,1.56274011167028,2.51264699101243,0,1.06958773443767,0,0.284743361598206,0.931997229126503,0.681535739998656,0.0755715601067855,13.6236309689789,4.30211938490693,0,0,0.649776417447669,0.448026887097336,3.93244376368905,0,0,0,0,0,0,0,0.216491041011214,0,0,3.76806803072898,52.0465146130815,17.5161724096493,6.24547176358089,9.74289530598852,9.91646638201052,12.3592565253151,17.6383060703557,8.54532821041793,2.71914464507811,11.1341504828332,4.42305275974937,6.47067399789637,5.96272099843063,8.24287930329878,3.72783522436244,14.0534782565543,10.6817820474862,3.83185582812887,15.4561510612637,4.79922184794726,7.11593271609162,1.9472783122627,0.457500602818626,0.376963056338593,1.04294592115366,0.511430914660661,1.24672826735736,1.46017136760982,2.74966282395854,5.349499736234,3.53811861807145,9.04899980311838,2.73252930221678,0.229902104433473,0.720248519221397,0.90422890701429,1.76894897793452,1.15302348256365,0.937017245597288,3.3631438196072,0.646703978798527,1.13463648100692,0.703804496655795,0.876782929710299,2.22437799380478,2.43776516565517,2.88094990971121,2.18937693500343,3.51106593656617,1.02939162845886,0.852490498186778,2.69263504296152,3.75241695969754,4.68161359798639,4.7348947117042,5.1158700254325,3.85667782218446,8.8362899005155,8.31647544338819,7.47298191149885,8.3925523455875,21.8342727225197,22.7803354823855,21.3451981640985,19.7595103761946,22.4124719329821,3.15434922846191,0.308713837137853,2.64335026387038,1.32225283331772,5.33220626338085,3.0190767341857,2.83508414908605,2.01683524623343,2.00140239460383,3.04361001780095,6.64340686162316,4.28217282282428,5.27803938480566,5.17286827306992,3.11942539390592,2.69645822596266,3.8904848977445,3.58454291857861,6.2590407314517,6.85491075658373,10.1436962105772,12.0154283428735,11.6371492300575,12.764719220038,19.5400899713955,17.4179974615931,15.8568715119789,13.4502908674763,1.77871576252289,0.83422552858047,2.35870794135844,1.79889689907883,0.811440485554012,0.964708639009667,1.01850340712568,4.3154420617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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71704 | |||
|HGNC= | |||
|MCL_coexpression_id=2898 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91X46 | |||
|association_with_transcript=0bp_to_ENSMUST00000049206,NM_027871,uc007stp.1_5end | |||
|cluster_id=chr14:28051204..28051232,+ | |||
|description=CAGE_peak_2_at_Arhgef3_5end | |||
|id=chr14:28051204..28051232,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.95e-07,9;CL:0000789,8.95e-07,9;CL:0002420,8.95e-07,9;CL:0002419,8.95e-07,9;CL:0000790,8.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!9.89e-12!42;UBERON:0000065!1.78e-11!41;UBERON:0000926!2.13e-09!193;UBERON:0004120!2.13e-09!193;UBERON:0006603!2.13e-09!193;UBERON:0003104!9.77e-09!131;UBERON:0009142!9.77e-09!131;UBERON:0004177!1.48e-08!29;UBERON:0005157!1.99e-08!27;UBERON:0006562!4.54e-08!24;UBERON:0001557!4.54e-08!24;UBERON:0001042!4.54e-08!24;UBERON:0008814!4.54e-08!24;UBERON:0009145!4.54e-08!24;UBERON:0003408!6.26e-08!24;UBERON:0002370!1.07e-07!23;UBERON:0000974!1.07e-07!23;UBERON:0004807!1.07e-07!23;UBERON:0005058!1.07e-07!23;UBERON:0003351!1.07e-07!23;UBERON:0009113!1.07e-07!23;UBERON:0003295!1.07e-07!23;UBERON:0009722!1.07e-07!23;UBERON:0005562!1.07e-07!23;UBERON:0007690!1.07e-07!23;UBERON:0000077!1.22e-07!97;UBERON:0002048!1.89e-07!14;UBERON:0000117!1.89e-07!14;UBERON:0000171!1.89e-07!14;UBERON:0000170!1.89e-07!14;UBERON:0005597!1.89e-07!14;UBERON:0000118!1.89e-07!14;UBERON:0001041!2.47e-07!92;UBERON:0005153!2.74e-07!17;UBERON:0003081!6.30e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.89e-12,42;UBERON:0000065,3.47e-12,41;UBERON:0000077,1.80e-09,35;UBERON:0004177,3.31e-09,29;UBERON:0005057,3.31e-09,29;UBERON:0006562,1.00e-08,24;UBERON:0001557,1.00e-08,24;UBERON:0001042,1.00e-08,24;UBERON:0008814,1.00e-08,24;UBERON:0009145,1.00e-08,24;UBERON:0003408,1.41e-08,24;UBERON:0002370,2.44e-08,23;UBERON:0000974,2.44e-08,23;UBERON:0004807,2.44e-08,23;UBERON:0005058,2.44e-08,23;UBERON:0003351,2.44e-08,23;UBERON:0009113,2.44e-08,23;UBERON:0003295,2.44e-08,23;UBERON:0009722,2.44e-08,23;UBERON:0005562,2.44e-08,23;UBERON:0007690,2.44e-08,23;UBERON:0001041,1.46e-07,80;UBERON:0002048,2.69e-07,14;UBERON:0000117,2.69e-07,14;UBERON:0000171,2.69e-07,14;UBERON:0000170,2.69e-07,14;UBERON:0005597,2.69e-07,14;UBERON:0000118,2.69e-07,14;UBERON:0005153,3.64e-07,17;UBERON:0003081,7.24e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,91.2901896731944,40.4063632575284,49.8557441065846,10.9579499664323,8.29630453551499,111.965277375009,109.100662218909,3.66420737997229,5.87178275430495,0,17.192688012024,19.0589062711977,7.21462408056651,13.6919697143222,0.496454756004426,0,0.639969691173627,0.91763712426868,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04017381807851,106.628234875668,75.9571986061969,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,1.10115880999389,1.65993539510744,1.22885226604995,0.263772575460388,0.457438218012048,1.56274011167028,2.51264699101243,0,1.06958773443767,0,0.284743361598206,0.931997229126503,0.681535739998656,0.0755715601067855,13.6236309689789,4.30211938490693,0,0,0.649776417447669,0.448026887097336,3.93244376368905,0,0,0,0,0,0,0,0.216491041011214,0,0,3.76806803072898,52.0465146130815,17.5161724096493,6.24547176358089,9.74289530598852,9.91646638201052,12.3592565253151,17.6383060703557,8.54532821041793,2.71914464507811,11.1341504828332,4.42305275974937,6.47067399789637,5.96272099843063,8.24287930329878,3.72783522436244,14.0534782565543,10.6817820474862,3.83185582812887,15.4561510612637,4.79922184794726,7.11593271609162,1.9472783122627,0.457500602818626,0.376963056338593,1.04294592115366,0.511430914660661,1.24672826735736,1.46017136760982,2.74966282395854,5.349499736234,3.53811861807145,9.04899980311838,2.73252930221678,0.229902104433473,0.720248519221397,0.90422890701429,1.76894897793452,1.15302348256365,0.937017245597288,3.3631438196072,0.646703978798527,1.13463648100692,0.703804496655795,0.876782929710299,2.22437799380478,2.43776516565517,2.88094990971121,2.18937693500343,3.51106593656617,1.02939162845886,0.852490498186778,2.69263504296152,3.75241695969754,4.68161359798639,4.7348947117042,5.1158700254325,3.85667782218446,8.8362899005155,8.31647544338819,7.47298191149885,8.3925523455875,21.8342727225197,22.7803354823855,21.3451981640985,19.7595103761946,22.4124719329821,3.15434922846191,0.308713837137853,2.64335026387038,1.32225283331772,5.33220626338085,3.0190767341857,2.83508414908605,2.01683524623343,2.00140239460383,3.04361001780095,6.64340686162316,4.28217282282428,5.27803938480566,5.17286827306992,3.11942539390592,2.69645822596266,3.8904848977445,3.58454291857861,6.2590407314517,6.85491075658373,10.1436962105772,12.0154283428735,11.6371492300575,12.764719220038,19.5400899713955,17.4179974615931,15.8568715119789,13.4502908674763,1.77871576252289,0.83422552858047,2.35870794135844,1.79889689907883,0.811440485554012,0.964708639009667,1.01850340712568,4.31544206176216,1.94562272130042,1.09824565275233,0,6.32639611036456,2.80833905803104,2.27320990152401,1.97337154874103,1.4473305640901,99.9514758801331,0.947457058852424,5.0519142697028,6.45031325945715,11.2651319178481,23.618382299296,50.7032955087209,37.4656603886974,68.8865579744055,70.868700687608,59.4766287092427,113.065687153859,80.1258315857756,85.3429445630918,0,0,6.88469982226651,6.07060841870411,2.56880943980467,1.05490517932983,0,12.1186045058099,2.2085575359138,2.34263246577983,0.646270193198397,0.477937595905104,0.222798674082394,0.566153061577665,0,2.33804686329049,0.790575555893047,0.963963949265421,2.98074178937364,1.6025904330053,4.0721739838394,3.29940245945071,5.30980553359851,1.45668381692989,0.906970670894253,1.13163047853539,0.885905678642318,3.68922177532713,3.6179961043551,7.27067458955011,7.48644494607915,3.47640433729398,1.05418608574999,3.09406629744561,1.02131881726136,1.08036656418786,0.776152102696527,1.07168517515796,2.30542303734956,3.56737635204141,1.97458824722545,1.522324745573,7.04015124191131,9.32061111800809,1.54369878638473,3.46261131177108,4.35953952078945,3.1362720962641,2.50681922406587,2.46211349617592,4.08073171281791,1.66882771809459,11.4483490134561,3.92135049130123,3.1483069652851,5.65105371014073,7.10809984149331,6.17701067657611,42.1546506384761,34.5680087239435,29.2983944465378,3.81868247206045,3.16335993581135,2.84647253977588,2.48412283890143,3.3454127362315,2.62035076495413,2.83215127408124,3.88471241909079,2.87931536182433,3.36998930558661,6.83473244395618,0,1.64468200648377,0.66183396182839,0.777804753376191,0.258319646955462,0.844780627453891,0.117357238645754,0.651021924219751,0.104859344425711,0.241584120826006,1.15212002503146,23.7008340471134,12.3662381327,12.9415806027682,17.0196278100911,14.3221356533985,15.8945083825012,13.9426721443164,15.8027794076798,16.7604306913925,18.518254017165,14.7206230299787,18.516997340553,19.5310038529869,21.8559807079534,11.789979947991,0.221985953374065,0.269141569828427,2.18250001273302,3.86379188064381,4.31669693537719,5.49454872801795,1.2862102744744,3.51100472824754,0,0.920650473014354,0,0.343706364687375,0.685082519770642,1.5107877947794,0.675022500231806,0,0,1.55328093525546,1.14166082342594,2.79317411380722,0.853668028770671,1.45864030240976,1.0480658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| |||
|short_description=p2@Arhgef3 | |||
}} |
Revision as of 04:39, 4 August 2015
Short description: | p2@Arhgef3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgef3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2898 |
Association with transcript: | 0bp_to_ENSMUST00000049206, NM_027871, uc007stp.1_5end |
EntrezGene: | 71704 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.95e-07 | 9 |
alpha-beta T cell | 8.95e-07 | 9 |
immature T cell | 8.95e-07 | 9 |
mature T cell | 8.95e-07 | 9 |
immature alpha-beta T cell | 8.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.89e-12 | 42 |
respiratory tract | 3.47e-12 | 41 |
mixed endoderm/mesoderm-derived structure | 1.80e-09 | 35 |
hemopoietic organ | 3.31e-09 | 29 |
immune organ | 3.31e-09 | 29 |
pharynx | 1.00e-08 | 24 |
upper respiratory tract | 1.00e-08 | 24 |
chordate pharynx | 1.00e-08 | 24 |
pharyngeal arch system | 1.00e-08 | 24 |
pharyngeal region of foregut | 1.00e-08 | 24 |
gland of gut | 1.41e-08 | 24 |
thymus | 2.44e-08 | 23 |
neck | 2.44e-08 | 23 |
respiratory system epithelium | 2.44e-08 | 23 |
hemolymphoid system gland | 2.44e-08 | 23 |
pharyngeal epithelium | 2.44e-08 | 23 |
thymic region | 2.44e-08 | 23 |
pharyngeal gland | 2.44e-08 | 23 |
entire pharyngeal arch endoderm | 2.44e-08 | 23 |
thymus primordium | 2.44e-08 | 23 |
early pharyngeal endoderm | 2.44e-08 | 23 |
foregut | 1.46e-07 | 80 |
lung | 2.69e-07 | 14 |
respiratory tube | 2.69e-07 | 14 |
respiration organ | 2.69e-07 | 14 |
pair of lungs | 2.69e-07 | 14 |
lung primordium | 2.69e-07 | 14 |
lung bud | 2.69e-07 | 14 |
epithelial bud | 3.64e-07 | 17 |
lateral plate mesoderm | 7.24e-07 | 87 |