FFCP PHASE1:Hg19::chr3:190040223..190040243,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2032 | |||
|TSSclassifier=strong | |||
|UniProt=B4DLC3,A5JSJ9,O95832 | |||
|association_with_transcript=0bp_to_ENST00000545382,NM_021101_5end | |||
|coexpression_cluster_id=C2736 | |||
|description=CAGE_peak_1_at_CLDN1_5end | |||
|id=chr3:190040223..190040243,- | |||
|ontology_enrichment_celltype=CL:0000066!4.90e-39!254;CL:0000223!6.66e-19!59;CL:0002076!3.97e-16!43;CL:0002321!2.16e-13!248;CL:0000220!2.17e-13!246;CL:1000497!7.45e-08!18;CL:0002518!7.45e-08!18;CL:0002251!2.28e-07!21;CL:1000449!2.85e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.55e-14;42!CL:0002251;7.86e-09;20!CL:1000497;2.39e-08;17!CL:0002518;2.39e-08;17!CL:1000449;9.59e-08;15!CL:1000507;2.31e-07;10!CL:1000494;2.31e-07;10!CL:0002368;8.06e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.80e-39,253;CL:0000223,8.86e-21,58;CL:0002076,4.57e-18,42;CL:0002321,1.79e-13,250;CL:0002251,8.43e-09,20;CL:1000497,2.11e-08,17;CL:0002518,2.11e-08,17;CL:1000449,8.38e-08,15;CL:1000507,2.29e-07,10;CL:1000494,2.29e-07,10;CL:0002368,8.15e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.11e-11;58!UBERON:0006595;4.24e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.63e-15!106;DOID:0050687!3.27e-13!143;DOID:120!3.80e-08!27;DOID:193!6.65e-08!29;DOID:1749!9.81e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:120;2.15e-08;27!DOID:1749;4.61e-08;14!DOID:193;7.88e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.48e-15,106;DOID:0050687,6.76e-13,143;DOID:120,2.34e-08,27;DOID:1749,5.05e-08,14;DOID:193,8.50e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.59e-24!169;UBERON:0000925!1.59e-24!169;UBERON:0006595!1.59e-24!169;UBERON:0000481!1.64e-23!347;UBERON:0001007!7.70e-21!155;UBERON:0001555!7.70e-21!155;UBERON:0007026!7.70e-21!155;UBERON:0000466!2.78e-20!126;UBERON:0003104!6.48e-19!238;UBERON:0009142!6.48e-19!238;UBERON:0004921!1.18e-17!129;UBERON:0004185!1.18e-17!129;UBERON:0005177!1.12e-16!107;UBERON:0000077!1.51e-16!130;UBERON:0000464!6.96e-16!104;UBERON:0001048!1.60e-15!168;UBERON:0000922!1.60e-15!612;UBERON:0001041!6.28e-15!98;UBERON:0005911!1.14e-14!82;UBERON:0002050!1.88e-14!605;UBERON:0005423!1.88e-14!605;UBERON:0000923!3.41e-14!604;UBERON:0005291!3.41e-14!604;UBERON:0006598!3.41e-14!604;UBERON:0002532!3.41e-14!604;UBERON:0000468!8.17e-14!659;UBERON:0000062!5.30e-13!511;UBERON:0000477!2.34e-12!286;UBERON:0000475!2.70e-12!365;UBERON:0001004!2.88e-12!72;UBERON:0000467!5.07e-12!625;UBERON:0000480!9.29e-12!626;UBERON:0002553!1.10e-11!70;UBERON:0001008!1.88e-11!45;UBERON:0006554!3.80e-11!44;UBERON:0000483!1.76e-10!309;UBERON:0003064!2.70e-10!37;UBERON:0004111!3.23e-10!241;UBERON:0000119!3.25e-10!312;UBERON:0003886!5.44e-10!63;UBERON:0005172!6.37e-10!55;UBERON:0005173!6.37e-10!55;UBERON:0000064!7.87e-10!219;UBERON:0000058!1.25e-09!26;UBERON:0002100!1.30e-09!216;UBERON:0003929!5.75e-09!54;UBERON:0005156!5.78e-09!59;UBERON:0000990!5.78e-09!59;UBERON:0000161!1.36e-08!35;UBERON:0000065!1.42e-08!53;UBERON:0002530!1.86e-08!59;UBERON:0009569!2.00e-08!113;UBERON:0004876!2.72e-08!20;UBERON:0000080!5.62e-08!18;UBERON:0002120!5.62e-08!18;UBERON:0004875!5.62e-08!18;UBERON:0005721!5.62e-08!18;UBERON:0005754!5.62e-08!18;UBERON:0007297!5.62e-08!18;UBERON:0006555!1.25e-07!17;UBERON:0005103!1.25e-07!17;UBERON:0000083!1.25e-07!17;UBERON:0009201!1.25e-07!17;UBERON:0004819!1.25e-07!17;UBERON:0006553!1.25e-07!17;UBERON:0003074!1.25e-07!17;UBERON:0003060!1.25e-07!17;UBERON:0002417!1.27e-07!61;UBERON:0000916!1.27e-07!61;UBERON:0005256!2.64e-07!143;UBERON:0004211!2.85e-07!16;UBERON:0001285!2.85e-07!16;UBERON:0007684!2.85e-07!16;UBERON:0003220!2.85e-07!16;UBERON:0004208!2.85e-07!16;UBERON:0003133!2.90e-07!48;UBERON:0000489!3.90e-07!32;UBERON:0008947!4.81e-07!38;UBERON:0003258!4.81e-07!38;UBERON:0001444!5.00e-07!48;UBERON:0002113!6.50e-07!27;UBERON:0003918!6.50e-07!27;UBERON:0005095!6.50e-07!27;UBERON:0007687!6.50e-07!27;UBERON:0003887!7.95e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.75e-09;30!UBERON:0001008;3.75e-09;30!UBERON:0006555;9.59e-08;15!UBERON:0004819;9.59e-08;15!UBERON:0001285;9.59e-08;15!UBERON:0007684;9.59e-08;15!UBERON:0004211;2.31e-07;10!UBERON:0009773;2.31e-07;10!UBERON:0001231;2.31e-07;10!UBERON:0004810;2.31e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.30e-22,160;UBERON:0000925,1.30e-22,160;UBERON:0006595,1.30e-22,160;UBERON:0001007,4.85e-19,145;UBERON:0001555,4.85e-19,145;UBERON:0007026,4.85e-19,145;UBERON:0005177,1.45e-17,101;UBERON:0004921,2.81e-16,118;UBERON:0005911,1.88e-15,82;UBERON:0001041,9.95e-14,87;UBERON:0000922,2.02e-13,592;UBERON:0001048,8.19e-13,160;UBERON:0001004,2.35e-12,74;UBERON:0005423,2.73e-11,581;UBERON:0001008,1.18e-10,48;UBERON:0006554,2.41e-10,47;UBERON:0005172,4.06e-10,54;UBERON:0005173,4.06e-10,54;UBERON:0004111,8.42e-10,240;UBERON:0003929,1.28e-09,54;UBERON:0011216,2.81e-09,223;UBERON:0000483,3.04e-09,306;UBERON:0000119,7.62e-09,309;UBERON:0002530,8.10e-09,59;UBERON:0000161,8.11e-09,36;UBERON:0000065,1.43e-08,54;UBERON:0005156,1.46e-08,59;UBERON:0000990,1.46e-08,59;UBERON:0002100,1.59e-08,199;UBERON:0002050,3.03e-08,564;UBERON:0006555,3.55e-08,16;UBERON:0004819,3.55e-08,16;UBERON:0002553,6.25e-08,61;UBERON:0009569,7.36e-08,112;UBERON:0004211,8.38e-08,15;UBERON:0009773,8.38e-08,15;UBERON:0001231,8.38e-08,15;UBERON:0001285,8.38e-08,15;UBERON:0007684,8.38e-08,15;UBERON:0004208,8.38e-08,15;UBERON:0000153,1.81e-07,62;UBERON:0007811,1.81e-07,62;UBERON:0002417,1.90e-07,60;UBERON:0000916,1.90e-07,60;UBERON:0000033,2.10e-07,56;UBERON:0004810,2.29e-07,10;UBERON:0000489,3.28e-07,31;UBERON:0000923,3.31e-07,560;UBERON:0010316,3.31e-07,560;UBERON:0005291,3.31e-07,560;UBERON:0006598,3.31e-07,560;UBERON:0010317,3.31e-07,560;UBERON:0002532,3.31e-07,560;UBERON:0002113,3.86e-07,26;UBERON:0003918,3.86e-07,26;UBERON:0011143,3.86e-07,26;UBERON:0005095,3.86e-07,26;UBERON:0007687,3.86e-07,26;UBERON:0003104,4.03e-07,160;UBERON:0009142,4.03e-07,160;UBERON:0003133,8.28e-07,48;UBERON:0008947,9.50e-07,38;UBERON:0003258,9.50e-07,38 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,4.36169262050184,0,0,0,130.976188155304,74.6647249730497,2.40285509343189,1.58260186937072,3.34169152992126,8.94772914465373,8.0679017574213,8.43772339233568,14.6062018077475,13.1741855673437,3.20114750999649,13.4640456221207,4.70182082217132,0.85870796139317,2.6006140763848,2.38531015230125,4.12632391038937,4.51553241974702,3.69940672174292,0,0,0.77408061658038,76.3119616317509,97.2895117653748,103.900876856867,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,0,0,0.272906150057846,0,1.22433556948361,1.60464513538047,1.27867425159808,0,0,0,0,1.13477044938228,0.622822248995575,0,0,0,6.05399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.0843174571537,1.50401373190767,1.73815822752988,0,0.973269740605272,125.542237193882,153.880201839019,161.791675246738,34.8404340823916,271.764285066236,217.279683471676,13.9555379271514,12.363211348248,76.8497011799041,0,0,0,0,0,0,0.56530794192401,1.67799774483962,0.275118041940067,0.626984899610432,8.26933629341852,19.5671444477691,13.3888245105868,9.66790361061953,3.80136052859256,4.14905497831888,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,106.406948722778,11.4303548889923,0.379891534993739,8.474187572046,3.44203944898576,11.7040566125458,5.04609840128076,7.47242970107935,25.9000925838018,0,7.9479296521116,0,1.66493170409425,0,13.824964478194,0,2.2818872861778,0.298897361103602,0.704606991862589,0.809364721840658,0.140450806702248,1.02077085627447,0.491337269247072,1.65321249881225,59.4001428641027,16.0723504031062,0,9.3420358436111,0,0.375355559615893,0.277064115484183,1.75591048352335,0.919463387397059,11.1176163590882,1.24775401476023,1.79389635688862,0.85422955527427,1.90738711043606,0.300091096084402,1.23663035086127,0.515281080091258,1.48893485065272,0,0.194874010322397,0,0.276149695926898,0.323292113637624,0,0.302256294682921,0.169560592310488,216.645416396056,702.866752762581,263.286618567106,3.53723747775827,2.78312513475119,5.92589108634544,14.9271919222133,4.54177531576131,2.91981887260664,1.56449532329816,12.8648187638577,4.14404764057442,0.928735856063958,0,21.5318376072516,19.0500699788255,22.1730147492803,31.4337822287323,27.4528099556432,33.4551572946646,19.4157083750637,17.2674889310305,30.0102782418185,0.738155454624648,4.20725321410337,15.2282384192618,0,348.576345760035,368.56020625411,181.963291257872,0,182.022889043808,180.31776862375,828.504904549714,140.502191572024,65.5448900123833,59.7195471272516,9.44844085399942,1.03993478527958,119.795013880977,60.5156713969901,221.550206022995,22.0880665074443,16.2044929401814,15.4105863310025,0.790204397959275,0,0,0,0.148631162288728,352.439215790281,761.295004997231,453.680311175637,11.3739323832617,31.3884653595079,4.21720947081732,0,0,0.207328115540772,0.720599767084807,1.51490920111656,0.317489471460845,1.52795370223311,7.03304683260282,18.8179690624976,8.22619941626588,27.6315613216404,15.1488009294206,0.672786506072164,3.05172048183296,0.07333828582095,53.0014034606889,0,0,11.4353390131494,5.2003718455683,2.57207374262142,2.83698264046557,2.1313774321288,6.57698770827479,10.8524321078289,0,0,7.10783897485092,0,171.217566169845,85.4102789428288,337.008953274714,0,0.502257091432126,0,36.9022277457037,8.04033550838797,0,3.4747513600219,1.02738161275192,0,0,0.197030760201927,0,0,0,1.30139853857622,2.31986643833309,0.670065061337395,1.27587750330633,0,0,0,0.24538298343828,1.00034104211935,51.5403545029498,0.623912584592421,1.78428988797162,4.25796520591624,2.45996971484698,34.6088014686877,15.9185252839189,7.24311499047534,0,4.97796755062599,2.60650843404249,2.74121620447837,0.686286847621712,0.206768026122887,0.647142602455851,0.106727557803444,1.5156378572313,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.640695746278505,1.02341449813341,0.482561763430822,7.42090332224955,0.771048469013278,0,0.328508624055237,24.4049581716302,0.697262270759755,131.253362256502,247.22447788395,176.243012823306,1.83703117063371,17.1165697926314,9.44095787707854,298.242944131799,273.943554080403,205.499639524336,151.984793639391,313.066131296269,10.2360045663807,2.89159298970077,68.8771772365825,30.8454505380579,144.685397648417,162.045796955118,420.290974251268,354.038379803637,182.681799853297,0,0,2.82095137628028,10.4964686623906,28.3079203357944,146.421277551413,0,0,567.948617078214,388.085966883803,17.6752322828576,13.9205834340656,0.616194468458578,0.15350367472613,1.24052915236078,0.214840489736547,0,2.55679882248303,1.24644849905432,392.05581923624,395.719348704754,122.76342941979,328.661629999682,0,6.2962469366128,1.3940745403212,7.392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| |||
|short_description=p1@CLDN1 | |||
}} |
Revision as of 23:18, 21 January 2014
Short description: | p1@CLDN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN1_5end |
Coexpression cluster: | C2736_oral_immature_endometrial_serous_Keratinocyte_Mallassezderived_Gingival |
Association with transcript: | 0bp_to_ENST00000545382, NM_021101_5end |
EntrezGene: | CLDN1 |
HGNC: | 2032 |
UniProt: | B4DLC3A5JSJ9O95832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.80e-39 | 253 |
endodermal cell | 8.86e-21 | 58 |
endo-epithelial cell | 4.57e-18 | 42 |
embryonic cell | 1.79e-13 | 250 |
epithelial cell of alimentary canal | 8.43e-09 | 20 |
kidney cell | 2.11e-08 | 17 |
kidney epithelial cell | 2.11e-08 | 17 |
epithelial cell of nephron | 8.38e-08 | 15 |
kidney tubule cell | 2.29e-07 | 10 |
nephron tubule epithelial cell | 2.29e-07 | 10 |
respiratory epithelial cell | 8.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.48e-15 | 106 |
cell type cancer | 6.76e-13 | 143 |
female reproductive organ cancer | 2.34e-08 | 27 |
squamous cell carcinoma | 5.05e-08 | 14 |
reproductive organ cancer | 8.50e-08 | 29 |