FFCP PHASE1:Hg19::chr3:183733654..183733680,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr3:183733654..183733680,- | |||
|id=chr3:183733654..183733680,- | |||
|ontology_enrichment_celltype=CL:0000764!1.38e-11!2;CL:0000765!1.38e-11!2;CL:0000050!1.38e-11!2;CL:0000038!1.38e-11!2;CL:0000558!1.38e-11!2;CL:0000547!1.38e-11!2;CL:0000549!1.38e-11!2;CL:0000550!1.38e-11!2;CL:0000552!1.38e-11!2;CL:0002586!1.66e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.97e-44;3!CL:0000149;1.63e-33;4!CL:0000147;2.29e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.97e-44,3;CL:0000149,1.63e-33,4;CL:0000147,2.29e-10,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.85e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-19!115;UBERON:0001896!1.85e-17!3;UBERON:0005290!1.85e-17!3;UBERON:0010096!1.85e-17!3;UBERON:0003296!3.92e-13!4;UBERON:0010133!3.92e-13!4;UBERON:0001905!1.93e-12!2;UBERON:0002757!1.93e-12!2;UBERON:0010134!1.93e-12!2;UBERON:0002784!1.93e-12!2;UBERON:0005408!1.93e-12!2;UBERON:0001899!1.93e-12!2;UBERON:0000966!7.71e-11!5;UBERON:0005388!7.71e-11!5;UBERON:0001802!7.71e-11!5;UBERON:0001781!1.66e-08!3;UBERON:0001782!1.66e-08!3;UBERON:0005424!1.66e-08!3;UBERON:0006947!2.76e-08!3;UBERON:0004054!2.76e-08!3;UBERON:0003978!4.40e-08!3;UBERON:0009751!4.40e-08!3;UBERON:0000946!4.40e-08!3;UBERON:0002523!4.40e-08!3;UBERON:0005983!4.40e-08!3;UBERON:0002165!4.40e-08!3;UBERON:0002062!4.40e-08!3;UBERON:0007280!4.40e-08!3;UBERON:0001894!1.08e-07!7;UBERON:0006222!1.08e-07!7;UBERON:0005418!6.80e-07!1;UBERON:0001389!6.80e-07!1;UBERON:0000026!6.80e-07!1;UBERON:0008784!6.80e-07!1;UBERON:0006058!6.80e-07!1;UBERON:0003663!6.80e-07!1;UBERON:0001383!6.80e-07!1;UBERON:0004256!6.80e-07!1;UBERON:0002529!6.80e-07!1;UBERON:0004708!6.80e-07!1;UBERON:0002101!6.80e-07!1;UBERON:0004709!6.80e-07!1;UBERON:0003661!6.80e-07!1;UBERON:0002471!6.80e-07!1;UBERON:0004357!6.80e-07!1;UBERON:0009872!6.80e-07!1;UBERON:0004347!6.80e-07!1;UBERON:0005420!6.80e-07!1;UBERON:0005732!6.80e-07!1;UBERON:0006057!6.80e-07!1;UBERON:0000978!6.80e-07!1;UBERON:0002103!6.80e-07!1;UBERON:0001665!6.80e-07!1;UBERON:0003823!6.80e-07!1;UBERON:0000154!6.80e-07!1;UBERON:0005733!6.80e-07!1;UBERON:0005730!6.80e-07!1;UBERON:0000998!7.60e-07!1;UBERON:0006868!7.60e-07!1;UBERON:0001000!8.03e-07!1;UBERON:0005352!8.03e-07!1;UBERON:0002298!8.06e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.84e-66;2!UBERON:0002757;2.84e-66;2!UBERON:0010134;2.84e-66;2!UBERON:0005408;2.84e-66;2!UBERON:0001899;2.84e-66;2!UBERON:0000966;2.01e-59;5!UBERON:0005388;2.01e-59;5!UBERON:0001802;2.01e-59;5!UBERON:0001781;2.97e-44;3!UBERON:0001782;2.97e-44;3!UBERON:0003296;8.36e-34;4!UBERON:0010133;8.36e-34;4!UBERON:0002784;8.36e-34;4!UBERON:0001894;7.84e-20;7!UBERON:0000019;2.39e-16;19!UBERON:0000047;2.39e-16;19!UBERON:0004088;2.39e-16;19!UBERON:0010230;2.39e-16;19!UBERON:0000970;1.43e-15;20!UBERON:0002104;7.18e-15;21!UBERON:0001456;7.18e-15;21!UBERON:0000020;1.20e-13;23!UBERON:0001032;4.11e-13;24!UBERON:0004456;4.11e-13;24!UBERON:0007625;6.49e-13;11!UBERON:0001896;2.07e-12;3!UBERON:0005290;2.07e-12;3!UBERON:0000033;6.49e-07;50!UBERON:0002298;7.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.84e-66,2;UBERON:0002757,2.84e-66,2;UBERON:0010134,2.84e-66,2;UBERON:0005408,2.84e-66,2;UBERON:0001899,2.84e-66,2;UBERON:0000966,1.05e-49,6;UBERON:0005388,1.05e-49,6;UBERON:0001802,1.05e-49,6;UBERON:0001782,2.97e-44,3;UBERON:0005424,2.97e-44,3;UBERON:0003296,8.36e-34,4;UBERON:0010133,8.36e-34,4;UBERON:0002784,8.36e-34,4;UBERON:0001781,1.63e-33,4;UBERON:0001894,7.84e-20,7;UBERON:0006222,7.84e-20,7;UBERON:0000019,1.43e-15,20;UBERON:0000047,1.43e-15,20;UBERON:0010312,1.43e-15,20;UBERON:0004088,1.43e-15,20;UBERON:0010230,1.43e-15,20;UBERON:0003072,1.43e-15,20;UBERON:0004128,1.43e-15,20;UBERON:0003071,1.43e-15,20;UBERON:0000970,7.18e-15,21;UBERON:0002104,7.18e-15,21;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0001456,3.13e-14,22;UBERON:0002346,4.44e-14,86;UBERON:0003056,9.42e-14,61;UBERON:0000020,4.11e-13,24;UBERON:0001032,4.11e-13,24;UBERON:0004456,4.11e-13,24;UBERON:0007625,6.49e-13,11;UBERON:0001896,2.07e-12,3;UBERON:0005290,2.07e-12,3;UBERON:0010096,2.07e-12,3;UBERON:0010371,9.68e-12,104;UBERON:0005085,2.52e-10,31;UBERON:0010314,2.38e-09,132;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0002298,7.58e-07,6;UBERON:0001444,8.74e-07,49 | |||
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|short_description=p@chr3:183733654..183733680,- | |||
}} |
Revision as of 22:57, 21 January 2014
Short description: | p@chr3:183733654..183733680, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:183733654..183733680, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.97e-44 | 3 |
visual pigment cell | 1.63e-33 | 4 |
pigment cell | 2.29e-10 | 14 |