FFCP PHASE1:Hg19::chr3:133614551..133614594,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51560 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14902 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NRW1 | |||
|association_with_transcript=65bp_to_ENST00000285208_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_RAB6B_5end | |||
|id=chr3:133614551..133614594,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.99e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.84e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.47e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.76e-56!115;UBERON:0001017!5.72e-43!82;UBERON:0005743!6.13e-41!86;UBERON:0001049!5.82e-40!57;UBERON:0005068!5.82e-40!57;UBERON:0006241!5.82e-40!57;UBERON:0007135!5.82e-40!57;UBERON:0000073!2.88e-39!94;UBERON:0001016!2.88e-39!94;UBERON:0002616!4.55e-36!59;UBERON:0000955!4.62e-36!69;UBERON:0006238!4.62e-36!69;UBERON:0002780!3.04e-32!41;UBERON:0001890!3.04e-32!41;UBERON:0006240!3.04e-32!41;UBERON:0003075!3.30e-32!86;UBERON:0007284!3.30e-32!86;UBERON:0003080!5.67e-31!42;UBERON:0002346!2.37e-29!90;UBERON:0002020!5.63e-28!34;UBERON:0003528!5.63e-28!34;UBERON:0001893!6.39e-28!34;UBERON:0002791!4.59e-27!33;UBERON:0001869!1.20e-26!32;UBERON:0003056!3.01e-21!61;UBERON:0000956!4.39e-21!25;UBERON:0000203!4.39e-21!25;UBERON:0002619!3.71e-20!22;UBERON:0004121!7.52e-20!169;UBERON:0000924!1.52e-18!173;UBERON:0006601!1.52e-18!173;UBERON:0001950!1.57e-18!20;UBERON:0000153!5.09e-17!129;UBERON:0007811!5.09e-17!129;UBERON:0000033!6.05e-17!123;UBERON:0000025!2.42e-10!194;UBERON:0003076!5.64e-10!15;UBERON:0003057!5.64e-10!15;UBERON:0004732!1.62e-08!13;UBERON:0002420!2.45e-08!9;UBERON:0007245!2.45e-08!9;UBERON:0010009!2.45e-08!9;UBERON:0010011!2.45e-08!9;UBERON:0000454!2.45e-08!9;UBERON:0002308!2.64e-08!9;UBERON:0000125!2.64e-08!9;UBERON:0004111!4.20e-08!241;UBERON:0001871!7.28e-08!7;UBERON:0004733!8.03e-08!12;UBERON:0002028!8.03e-08!12;UBERON:0007277!8.03e-08!12;UBERON:0000477!1.35e-07!286;UBERON:0000064!4.32e-07!219;UBERON:0000200!9.92e-07!6;UBERON:0009663!9.97e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.77e-43;34!UBERON:0002020;4.77e-43;34!UBERON:0001869;4.84e-43;32!UBERON:0001893;5.22e-43;34!UBERON:0002791;1.64e-42;32!UBERON:0002619;6.78e-42;22!UBERON:0002780;2.65e-39;41!UBERON:0001890;2.65e-39;41!UBERON:0001950;2.39e-38;20!UBERON:0000956;3.96e-36;25!UBERON:0000203;3.96e-36;25!UBERON:0000073;5.44e-36;53!UBERON:0002616;5.44e-36;53!UBERON:0001017;1.24e-27;75!UBERON:0000955;1.54e-25;68!UBERON:0001016;1.66e-22;83!UBERON:0002420;3.81e-16;9!UBERON:0007245;3.81e-16;9!UBERON:0010009;3.81e-16;9!UBERON:0010011;3.81e-16;9!UBERON:0000454;3.81e-16;9!UBERON:0000125;4.48e-16;9!UBERON:0002308;4.48e-16;9!UBERON:0007023;7.72e-16;114!UBERON:0001871;2.51e-13;6!UBERON:0004732;4.02e-13;13!UBERON:0000200;1.02e-12;6!UBERON:0009663;1.10e-12;7!UBERON:0002298;8.23e-12;6!UBERON:0004733;1.09e-11;12!UBERON:0002028;1.09e-11;12!UBERON:0001872;1.56e-10;5!UBERON:0000349;2.41e-10;5!UBERON:0002021;2.43e-10;5!UBERON:0011216;3.49e-09;132!UBERON:0000369;1.94e-08;4!UBERON:0002435;1.94e-08;4!UBERON:0000204;1.94e-08;4!UBERON:0002784;2.48e-07;4!UBERON:0002680;2.65e-07;9!UBERON:0001895;2.65e-07;9!UBERON:0001870;3.57e-07;3!UBERON:0000988;6.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.20e-71,56;UBERON:0005068,7.20e-71,56;UBERON:0006241,7.20e-71,56;UBERON:0007135,7.20e-71,56;UBERON:0001017,2.60e-66,81;UBERON:0000073,7.35e-66,53;UBERON:0002616,7.35e-66,53;UBERON:0001016,1.73e-62,89;UBERON:0007023,9.77e-59,114;UBERON:0000955,4.18e-57,68;UBERON:0006238,4.18e-57,68;UBERON:0002780,3.03e-55,41;UBERON:0001890,3.03e-55,41;UBERON:0003080,3.03e-55,41;UBERON:0006240,3.03e-55,41;UBERON:0003075,7.08e-52,82;UBERON:0007284,7.08e-52,82;UBERON:0003528,6.44e-51,34;UBERON:0002020,6.44e-51,34;UBERON:0001893,8.31e-51,34;UBERON:0002346,1.09e-48,86;UBERON:0001869,5.06e-48,32;UBERON:0002791,2.03e-47,32;UBERON:0002619,7.93e-42,22;UBERON:0010371,1.14e-40,104;UBERON:0001950,2.76e-38,20;UBERON:0003056,1.48e-37,61;UBERON:0000956,4.53e-36,25;UBERON:0000203,4.53e-36,25;UBERON:0010314,4.38e-30,132;UBERON:0004121,1.13e-29,171;UBERON:0000924,1.13e-29,171;UBERON:0006601,1.13e-29,171;UBERON:0011216,1.94e-23,223;UBERON:0002420,3.44e-16,9;UBERON:0007245,3.44e-16,9;UBERON:0010009,3.44e-16,9;UBERON:0010011,3.44e-16,9;UBERON:0000454,3.44e-16,9;UBERON:0003076,3.78e-16,15;UBERON:0003057,3.78e-16,15;UBERON:0000125,4.04e-16,9;UBERON:0002308,4.04e-16,9;UBERON:0000025,2.96e-15,192;UBERON:0001871,2.84e-13,6;UBERON:0004732,4.04e-13,13;UBERON:0000200,9.81e-13,6;UBERON:0009663,9.91e-13,7;UBERON:0002298,8.19e-12,6;UBERON:0004733,1.10e-11,12;UBERON:0002028,1.10e-11,12;UBERON:0007277,1.10e-11,12;UBERON:0004111,1.75e-11,240;UBERON:0001872,1.61e-10,5;UBERON:0002021,2.40e-10,5;UBERON:0000349,2.44e-10,5;UBERON:0000369,2.02e-08,4;UBERON:0002435,2.02e-08,4;UBERON:0000204,2.02e-08,4;UBERON:0010082,2.02e-08,4;UBERON:0002784,1.82e-07,4;UBERON:0002680,2.70e-07,9;UBERON:0001895,2.70e-07,9;UBERON:0010092,2.70e-07,9;UBERON:0001870,3.58e-07,3;UBERON:0000988,6.40e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.245733936501509,2.09340350391728,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0.492484232307152,0,0.626909442956176,0.572471974262113,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,8.05521314310933,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,1.05950199351452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,2.19552671033272,2.38553582978673,2.5562667431294,1.55491582523056,1.26160425437814,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.190493682876507,0.763976851116555,0,0,0.102827492703324,2.40274446275134,0.857479297891735,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,2.28685161800217,5.20559415430487,2.31986643833309,2.17771144934653,1.91381625495949,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,1.40354529212299,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,18.4178296382585,15.1632561594442,0,0,0,0.824328093181778,0.457847324091717,0.577566499444116,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0.495854746082934,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,3.04468565539302,0.764637207142375,1.13929437434833,0,0.411362273086194,0,1.62009431171434,3.96562588147135,0.106824071127473,1.92495971052672,0,0,0,0,0.478278818186467,0,0,0,4.22008522356922,0,0,0,0,0,0,0,0,2.06103206853459,0,0,0,0,0,3.69262196843137,14.8750623161791,0,1.4098700508785,0,0.439524537815682,0.121360521749513,0,0.284136146806413,0,0,0,38.7717582628856,47.2649239139323,0,0.16480387422676,0.422250816255987,0.597743964753209,2.21027132424918,0,0.20453736500431,0,0.311039587661807,0,0,0,0.493217028184668,2.3948309234694,2.22273980289274,46.5279718125705,55.7536269952726,15.9691038400955,0,0,0,0,0,0,0.344743373241465,0,0.868124974666461,22.143534645346,31.2344776039807,4.5774520895125,10.3944504335351,10.0486190444206,60.1115988201885,0,0,0.230850775511391,0.113942055847001,0,0,0.217294743844016,0,0,0,0,0,4.98635045700469,1.1279783030859,0.588187602953219,0.503464760927528,0,2.2251121057253,0.421996129056054,0,0.141353071433941,0.216388639742091,1.99052386215701,0.619202951523374,1.22206028986725,0,0.123563938946503,0.104421949505455,6.40310763316432,0.802577647298789,22.9579156810832,0,0,0,1.57833761139756,1.20990716048664,8.57003732565372,0.947798694427319,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0,1.04135843001079,0,0,0.34945333648406,0,0,0,0,0.484945082442097,1.3238419003725,4.97157629717171,0.137041924646751,0,49.3824208455854,0.195551382734803,0.240476460754601,0.426905989478705,0.39961921916426,0,0.343609788497747,0.171594997861965,0,0,0.235694034616795,0,0.209205692624666,0.101998217636322,0.288950589901519,22.815970970972,6.70836356570766,0,0,0.262887354279314,2.51354161145029,2.06244381610515,0.717873024576814,0.599037001496973,1.28767814440971,0.223171457441873,0.470284307407084,0.360299883542404,0,0,0,0,0.492137407573744,0,48.5090110783675,34.0508515278939,0.321506296930038,0.962776056180637,0,0,0,58.6840717316518,0,0.315222829196793,0.891727998294968,0,0.179287339332845,0,0.714695326373367,2.64836788146173,0.5085370753095,0,0,0,0,5.74647645245373,0,0.113312091520126,0,2.65013777824443,48.610391591943,19.17372725269,0.171086837884329,0,0.106787412567695,0.314408610199332,0.414239055347196,0.992332043623902,0,0,0,2.1760712134779,0.5013797880454,0.306345576763462,0.983617892129413,0.157054096250234,54.0501589779861,53.6915565568638,65.6000476902059,18.9225034577724,13.6442733390328,25.7079108177327,0.553394539744923,0,0.303298235083296,2.85465333544967,0,0.936669811613763,1.44921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0.414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| |||
|short_description=p2@RAB6B | |||
}} |
Revision as of 21:29, 21 January 2014
Short description: | p2@RAB6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB6B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 65bp_to_ENST00000285208_5end |
EntrezGene: | RAB6B |
HGNC: | 14902 |
UniProt: | Q9NRW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.84e-08 | 5 |