FFCP PHASE1:Hg19::chr2:216262464..216262489,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt=B4DU16 | |||
|association_with_transcript=43bp_to_AK300458_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_25_at_FN1_5end | |||
|id=chr2:216262464..216262489,- | |||
|ontology_enrichment_celltype=CL:0000055!1.91e-34!180;CL:0000057!2.22e-24!75;CL:0002371!2.27e-15!591;CL:0000144!2.02e-13!625;CL:0000680!2.88e-13!57;CL:0000056!2.88e-13!57;CL:0000355!2.88e-13!57;CL:0000183!8.24e-13!59;CL:0000187!5.04e-12!54;CL:0000220!1.04e-11!246;CL:0002321!2.14e-11!248;CL:0000222!1.88e-10!119;CL:0002620!4.62e-10!23;CL:0000393!1.47e-09!60;CL:0000211!1.47e-09!60;CL:0000548!1.84e-08!679;CL:0000004!1.84e-08!679;CL:0000255!1.84e-08!679;CL:0002334!3.04e-08!12;CL:0000192!3.97e-08!42;CL:0000514!3.97e-08!42;CL:0000012!6.12e-08!682;CL:0000048!2.50e-07!430;CL:0000723!3.26e-07!436;CL:0002494!3.78e-07!16;CL:0000359!4.39e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.82e-13;55!CL:0000723;4.47e-12;61!CL:0000048;4.24e-11;58!CL:0000057;9.19e-11;73!CL:0002620;3.96e-10;23!CL:0002320;9.87e-10;188!CL:0002334;2.86e-09;12!CL:0000349;4.46e-09;19!CL:0000034;5.84e-09;69!CL:0002494;4.98e-08;16!CL:0000499;9.03e-08;28!CL:0000187;1.32e-07;55!CL:0000359;2.85e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.75e-26,76;CL:0000048,8.50e-18,427;CL:0000723,2.31e-17,433;CL:0000034,3.91e-16,441;CL:0000680,7.50e-15,58;CL:0000056,7.50e-15,58;CL:0000355,7.50e-15,58;CL:0000187,2.00e-13,55;CL:0000393,1.65e-10,61;CL:0000211,1.65e-10,61;CL:0002620,3.75e-10,23;CL:0002334,2.76e-09,12;CL:0000349,3.82e-09,19;CL:0000222,4.27e-09,121;CL:0000192,5.78e-09,43;CL:0000514,5.78e-09,43;CL:0002320,1.04e-08,361;CL:0002494,5.05e-08,16;CL:0000499,7.70e-08,28;CL:0000359,1.28e-07,32;CL:0002321,1.76e-07,250;CL:0000134,2.22e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000355;5.67e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.43e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.08e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!7.82e-18!143;UBERON:0000914!5.32e-17!83;UBERON:0002329!5.32e-17!83;UBERON:0003077!5.32e-17!83;UBERON:0003059!5.32e-17!83;UBERON:0007282!5.32e-17!83;UBERON:0009618!5.32e-17!83;UBERON:0007285!5.32e-17!83;UBERON:0004290!1.53e-15!70;UBERON:0000486!3.20e-14!82;UBERON:0003914!8.08e-14!118;UBERON:0004872!1.64e-13!84;UBERON:0000490!9.80e-13!138;UBERON:0001134!1.26e-12!61;UBERON:0002036!1.26e-12!61;UBERON:0003082!1.26e-12!61;UBERON:0002385!3.39e-12!63;UBERON:0001015!3.39e-12!63;UBERON:0000383!3.39e-12!63;UBERON:0002199!6.20e-12!45;UBERON:0002416!6.20e-12!45;UBERON:0002049!1.44e-11!79;UBERON:0007798!1.44e-11!79;UBERON:0002100!1.67e-11!216;UBERON:0003102!5.85e-11!95;UBERON:0002097!3.54e-10!40;UBERON:0004535!5.07e-10!110;UBERON:0001009!6.20e-10!113;UBERON:0000475!6.27e-10!365;UBERON:0000468!1.03e-09!659;UBERON:0000119!2.08e-09!312;UBERON:0000055!4.64e-09!69;UBERON:0000483!6.14e-09!309;UBERON:0001637!1.07e-08!42;UBERON:0003509!1.07e-08!42;UBERON:0004572!1.07e-08!42;UBERON:0001981!1.50e-08!60;UBERON:0007500!1.50e-08!60;UBERON:0004537!1.50e-08!60;UBERON:0006965!1.50e-08!60;UBERON:0004923!1.53e-08!57;UBERON:0000948!1.73e-07!24;UBERON:0005498!1.73e-07!24;UBERON:0004140!1.73e-07!24;UBERON:0009881!1.73e-07!24;UBERON:0004141!1.73e-07!24;UBERON:0003084!1.73e-07!24;UBERON:0007005!1.73e-07!24;UBERON:0004139!1.73e-07!24;UBERON:0004291!1.73e-07!24;UBERON:0003104!1.82e-07!238;UBERON:0009142!1.82e-07!238;UBERON:0007100!5.13e-07!27;UBERON:0004573!9.24e-07!33;UBERON:0004571!9.24e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.28e-09;198!UBERON:0002199;2.17e-08;46!UBERON:0002416;2.17e-08;46!UBERON:0002097;2.88e-08;41!UBERON:0002385;1.34e-07;31!UBERON:0001015;1.34e-07;31!UBERON:0000383;1.34e-07;31!UBERON:0001013;4.52e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.05e-17,78;UBERON:0002329,2.98e-17,71;UBERON:0003059,2.98e-17,71;UBERON:0007282,2.98e-17,71;UBERON:0004290,2.98e-17,71;UBERON:0009618,2.98e-17,71;UBERON:0007524,3.27e-17,73;UBERON:0003077,1.06e-16,72;UBERON:0007285,1.06e-16,72;UBERON:0005256,1.71e-16,122;UBERON:0003104,1.03e-15,160;UBERON:0009142,1.03e-15,160;UBERON:0000486,1.40e-15,83;UBERON:0001134,6.50e-14,62;UBERON:0002036,6.50e-14,62;UBERON:0003082,6.50e-14,62;UBERON:0002385,1.44e-13,64;UBERON:0001015,1.44e-13,64;UBERON:0000383,1.44e-13,64;UBERON:0000490,2.96e-13,148;UBERON:0002199,2.47e-12,46;UBERON:0002416,2.47e-12,46;UBERON:0004872,1.06e-11,83;UBERON:0003914,1.97e-10,117;UBERON:0002097,2.34e-10,41;UBERON:0000926,2.81e-10,315;UBERON:0004120,2.81e-10,315;UBERON:0006603,2.81e-10,315;UBERON:0003102,4.35e-10,99;UBERON:0002049,5.30e-10,78;UBERON:0007798,5.30e-10,78;UBERON:0004923,7.22e-10,66;UBERON:0004535,3.34e-09,109;UBERON:0001637,6.81e-09,42;UBERON:0003509,6.81e-09,42;UBERON:0004572,6.81e-09,42;UBERON:0002384,7.01e-09,371;UBERON:0002100,8.16e-09,199;UBERON:0001009,1.99e-08,112;UBERON:0000055,4.26e-08,68;UBERON:0007500,2.29e-07,59;UBERON:0001981,2.29e-07,59;UBERON:0004537,2.29e-07,59;UBERON:0006965,2.29e-07,59;UBERON:0005631,3.18e-07,14;UBERON:0000158,3.18e-07,14;UBERON:0004573,4.52e-07,33;UBERON:0004571,4.52e-07,33;UBERON:0001013,5.06e-07,14;UBERON:0000948,6.53e-07,24;UBERON:0005498,6.53e-07,24;UBERON:0004140,6.53e-07,24;UBERON:0009881,6.53e-07,24;UBERON:0004141,6.53e-07,24;UBERON:0003084,6.53e-07,24;UBERON:0007005,6.53e-07,24;UBERON:0004139,6.53e-07,24;UBERON:0004291,6.53e-07,24;UBERON:0000478,9.33e-07,24 | |||
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| |||
|short_description=p25@FN1 | |||
}} |
Revision as of 08:23, 21 January 2014
Short description: | p25@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 43bp_to_AK300458_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DU16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.75e-26 | 76 |
multi fate stem cell | 8.50e-18 | 427 |
somatic stem cell | 2.31e-17 | 433 |
stem cell | 3.91e-16 | 441 |
muscle precursor cell | 7.50e-15 | 58 |
myoblast | 7.50e-15 | 58 |
multi-potent skeletal muscle stem cell | 7.50e-15 | 58 |
muscle cell | 2.00e-13 | 55 |
electrically responsive cell | 1.65e-10 | 61 |
electrically active cell | 1.65e-10 | 61 |
skin fibroblast | 3.75e-10 | 23 |
preadipocyte | 2.76e-09 | 12 |
extraembryonic cell | 3.82e-09 | 19 |
mesodermal cell | 4.27e-09 | 121 |
smooth muscle cell | 5.78e-09 | 43 |
smooth muscle myoblast | 5.78e-09 | 43 |
connective tissue cell | 1.04e-08 | 361 |
cardiocyte | 5.05e-08 | 16 |
stromal cell | 7.70e-08 | 28 |
vascular associated smooth muscle cell | 1.28e-07 | 32 |
embryonic cell | 1.76e-07 | 250 |
mesenchymal cell | 2.22e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.08e-07 | 14 |