FFCP PHASE1:Hg19::chr2:216241256..216241335,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt=B4DN21 | |||
|association_with_transcript=0bp_to_AK297733_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_10_at_FN1_5end | |||
|id=chr2:216241256..216241335,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-35!180;CL:0000057!3.84e-24!75;CL:0000680!7.87e-16!57;CL:0000056!7.87e-16!57;CL:0000355!7.87e-16!57;CL:0002371!3.22e-15!591;CL:0000183!4.93e-15!59;CL:0000187!1.71e-14!54;CL:0000144!1.80e-13!625;CL:0000220!7.18e-13!246;CL:0000222!1.16e-12!119;CL:0002321!1.75e-12!248;CL:0000393!7.91e-12!60;CL:0000211!7.91e-12!60;CL:0000192!4.92e-10!42;CL:0000514!4.92e-10!42;CL:0002620!5.07e-10!23;CL:0000359!1.18e-08!32;CL:0000548!3.41e-08!679;CL:0000004!3.41e-08!679;CL:0000255!3.41e-08!679;CL:0002334!4.85e-08!12;CL:0000012!1.22e-07!682;CL:0002494!1.53e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.13e-12;55!CL:0000057;5.44e-11;73!CL:0002620;6.80e-11;23!CL:0000723;7.40e-11;61!CL:0000048;4.87e-10;58!CL:0000349;1.19e-09;19!CL:0000187;1.63e-09;55!CL:0002320;4.74e-09;188!CL:0000359;5.81e-09;32!CL:0002334;9.73e-09;12!CL:0000192;2.39e-08;43!CL:0000034;2.40e-08;69!CL:0002494;3.54e-08;16!CL:0000499;2.25e-07;28!CL:0000393;3.39e-07;61!CL:0000211;3.39e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.67e-27,76;CL:0000680,7.29e-18,58;CL:0000056,7.29e-18,58;CL:0000355,7.29e-18,58;CL:0000187,2.25e-16,55;CL:0000048,9.30e-15,427;CL:0000723,1.85e-14,433;CL:0000034,1.13e-13,441;CL:0000393,9.50e-13,61;CL:0000211,9.50e-13,61;CL:0000222,2.48e-12,121;CL:0000192,2.05e-11,43;CL:0000514,2.05e-11,43;CL:0002620,6.39e-11,23;CL:0002321,1.07e-10,250;CL:0000349,1.17e-09,19;CL:0000359,2.07e-09,32;CL:0002334,9.90e-09,12;CL:0002494,3.53e-08,16;CL:0000499,1.95e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.07e-09;58!CL:0000514;2.39e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!7.29e-20!143;UBERON:0000914!2.49e-18!83;UBERON:0002329!2.49e-18!83;UBERON:0003077!2.49e-18!83;UBERON:0003059!2.49e-18!83;UBERON:0007282!2.49e-18!83;UBERON:0009618!2.49e-18!83;UBERON:0007285!2.49e-18!83;UBERON:0004290!2.29e-16!70;UBERON:0000486!6.15e-16!82;UBERON:0003914!1.18e-15!118;UBERON:0004872!1.61e-14!84;UBERON:0000490!1.71e-14!138;UBERON:0001134!4.30e-14!61;UBERON:0002036!4.30e-14!61;UBERON:0003082!4.30e-14!61;UBERON:0002385!6.85e-14!63;UBERON:0001015!6.85e-14!63;UBERON:0000383!6.85e-14!63;UBERON:0002100!1.40e-13!216;UBERON:0002049!8.17e-13!79;UBERON:0007798!8.17e-13!79;UBERON:0000468!2.19e-11!659;UBERON:0000475!6.42e-11!365;UBERON:0004535!1.36e-10!110;UBERON:0000119!1.39e-10!312;UBERON:0001009!1.77e-10!113;UBERON:0000483!3.61e-10!309;UBERON:0002199!3.78e-10!45;UBERON:0002416!3.78e-10!45;UBERON:0000055!5.85e-10!69;UBERON:0001637!6.07e-10!42;UBERON:0003509!6.07e-10!42;UBERON:0004572!6.07e-10!42;UBERON:0003102!9.31e-10!95;UBERON:0001981!1.52e-09!60;UBERON:0007500!1.52e-09!60;UBERON:0004537!1.52e-09!60;UBERON:0006965!1.52e-09!60;UBERON:0003104!2.69e-09!238;UBERON:0009142!2.69e-09!238;UBERON:0002097!1.21e-08!40;UBERON:0000481!2.98e-08!347;UBERON:0004923!3.37e-08!57;UBERON:0000948!8.48e-08!24;UBERON:0005498!8.48e-08!24;UBERON:0004140!8.48e-08!24;UBERON:0009881!8.48e-08!24;UBERON:0004141!8.48e-08!24;UBERON:0003084!8.48e-08!24;UBERON:0007005!8.48e-08!24;UBERON:0004139!8.48e-08!24;UBERON:0004291!8.48e-08!24;UBERON:0004573!9.05e-08!33;UBERON:0004571!9.05e-08!33;UBERON:0000467!9.56e-08!625;UBERON:0000480!1.43e-07!626;UBERON:0007100!2.86e-07!27;UBERON:0005631!5.74e-07!14;UBERON:0000158!5.74e-07!14;UBERON:0000478!8.51e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.18e-08;198!UBERON:0001637;3.86e-08;42!UBERON:0003509;3.86e-08;42!UBERON:0004572;3.86e-08;42!UBERON:0004573;7.53e-08;33!UBERON:0004571;7.53e-08;33!UBERON:0000478;9.19e-08;24!UBERON:0002199;1.25e-07;46!UBERON:0002416;1.25e-07;46!UBERON:0002097;1.58e-07;41!UBERON:0000948;3.92e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.02e-19,78;UBERON:0005256,1.84e-18,122;UBERON:0002329,2.08e-18,71;UBERON:0003059,2.08e-18,71;UBERON:0007282,2.08e-18,71;UBERON:0004290,2.08e-18,71;UBERON:0009618,2.08e-18,71;UBERON:0007524,2.53e-18,73;UBERON:0000486,8.31e-18,83;UBERON:0003077,8.64e-18,72;UBERON:0007285,8.64e-18,72;UBERON:0003104,2.35e-17,160;UBERON:0009142,2.35e-17,160;UBERON:0001134,6.99e-16,62;UBERON:0002036,6.99e-16,62;UBERON:0003082,6.99e-16,62;UBERON:0002385,2.28e-15,64;UBERON:0001015,2.28e-15,64;UBERON:0000383,2.28e-15,64;UBERON:0000490,2.77e-15,148;UBERON:0004872,2.69e-14,83;UBERON:0003914,7.54e-14,117;UBERON:0002049,8.50e-13,78;UBERON:0007798,8.50e-13,78;UBERON:0004535,1.66e-11,109;UBERON:0002199,3.00e-11,46;UBERON:0002416,3.00e-11,46;UBERON:0001009,3.73e-11,112;UBERON:0001637,5.87e-11,42;UBERON:0003509,5.87e-11,42;UBERON:0004572,5.87e-11,42;UBERON:0000926,2.62e-10,315;UBERON:0004120,2.62e-10,315;UBERON:0006603,2.62e-10,315;UBERON:0003102,4.92e-10,99;UBERON:0004923,6.38e-10,66;UBERON:0000055,7.98e-10,68;UBERON:0002100,1.03e-09,199;UBERON:0002097,1.39e-09,41;UBERON:0007500,3.08e-09,59;UBERON:0001981,3.08e-09,59;UBERON:0004537,3.08e-09,59;UBERON:0006965,3.08e-09,59;UBERON:0004573,1.50e-08,33;UBERON:0004571,1.50e-08,33;UBERON:0000948,5.45e-08,24;UBERON:0005498,5.45e-08,24;UBERON:0004140,5.45e-08,24;UBERON:0009881,5.45e-08,24;UBERON:0004141,5.45e-08,24;UBERON:0003084,5.45e-08,24;UBERON:0007005,5.45e-08,24;UBERON:0004139,5.45e-08,24;UBERON:0004291,5.45e-08,24;UBERON:0000119,6.85e-08,309;UBERON:0000478,9.55e-08,24;UBERON:0005631,1.52e-07,14;UBERON:0000158,1.52e-07,14;UBERON:0000483,1.62e-07,306;UBERON:0007100,4.07e-07,27 | |||
|phase1_expression=52.868408367732,109.405367708292,48.770223817206,59.0432460283469,17.8784437770915,62.8083737352265,17.7309914717817,11.370957721683,3.3954131665979,2.7030733015166,2.09340350391728,15.9462201655026,24.7940959534746,8.41611200128317,17.5640609135795,24.2037052722639,17.4781413126953,11.684961446198,9.75865597581014,3.69363174230364,5.10001728110633,4.38836610069323,0.572471974262113,1.36874425072884,4.2684497462233,0,0,0,0,0,1.08371286321253,0.919421224478927,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,551.003517869553,36.8885472837,19.3072468383731,11.9274920286907,15.5414752297126,14.9191914529648,157.466617516118,424.345606903898,2.6469748805939,8.64744650103999,6.58760892698445,0.851363990735132,0.364295288292542,0,0,0.174129737299267,0.132957960518865,0,0,0,1.19257444420023,1.72046919021225,4.16568601929113,6.78369530308812,7.97048928798821,10.1793675517825,3.9709043641994,3.87625138753993,4.62496141492723,6.02497102976406,2.01414658554573,0.760272105718513,3.1728067481262,0,23.494116488571,1.16089646769304,0.44905874525234,0.675668882899933,3.06633274931766,0,2.38162267109529,0,0,0.436094052142534,91.4428391119386,40.2685027093364,108.310709905213,111.29260885054,29.792144104662,15.1382952038423,33.0921886762085,57.7202063296154,19.2950841947855,21.5537075311501,15.3654188926651,44.9531560105446,63.3793516927999,3.51482147750695,36.2105689123172,7.41613368007784,28.8435953464976,6.81120092133836,7.76990132967031,4.3539750077697,6.94124182266637,6.38738450021193,7.12947890112782,7.12801714369232,21.0176889886773,10.9219363432563,9.3420358436111,8.58514181165738,6.50616303334214,2.21651292387346,6.58466431321257,24.8255114597206,12.1692827714343,17.9222849392833,49.332149814437,30.3251492122366,64.0034341501877,44.4134822204915,25.6600797803713,61.5760890709054,28.6619958750648,69.3670725511604,33.2260187599687,79.264205112652,32.4936142207317,25.2167848637347,55.0264868400752,18.1353776809752,9.32583257707682,6.57086900755209,10.0916064618609,1.14721838155602,0.121973706129595,0,2.67246068599892,2.17688215532278,1.00928340350251,0.36497735907583,12.5159625863853,55.961961622781,1.38134921352481,55.2597834358055,45.4784073451839,0,0,0,0,0,0,0,0.196221465125346,0,0,5.60967095213783,19.7555525439072,23.5213938216867,11.4079531339648,17.6908899001973,1.18157981336281,0,3.32068784066407,5.66173773985134,11.3042793970884,1.1240175325762,0.301586917234893,1.11106134190236,1.95484983186195,4.15973914111831,7.21656710126366,0.231860809950154,24.3035997068151,2.02113026865503,4.62985512576611,3.99533719692656,0,0,0,0,0.148631162288728,0.93733833986777,14.2784808969031,0.708875486211932,19.7028749946266,8.71901815541886,11.1180976957911,0,0,0.414656231081544,0,0,0.190493682876507,0,0,5.13217338068116,5.44985711327615,0.300343057843917,0,3.92458795208763,10.0270815831654,7.333828582095,19.0029422163933,46.4953379607447,32.121504597128,9.57377219705534,5.2003718455683,11.8315392160585,7.09245660116391,10.9233093396601,7.00592168924923,29.8441882965294,13.1718453884923,11.4007664502807,5.33087923113819,5.543663110534,8.44030255766841,8.71533458600294,2.7992437530976,1.2162378064119,0,14.7583757638122,35.2248537572627,31.0127226752108,12.8373214536647,27.50844826684,38.2185959943713,18.9804621034289,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,11.9010746967566,30.5104017846403,13.0207211375873,37.0188133524837,83.6831957458689,24.2861719152259,41.4680609074205,17.7558198839354,4.5481500811197,13.4514992680256,26.5690239414175,19.1743935283371,12.0768224110635,10.573262502988,11.6668764095691,0,0,0,3.63753085735511,56.588049433569,19.9577593597589,123.061472678113,136.120770306511,146.785229388497,59.8409827024123,76.2443801109388,87.5045331021225,56.3988652490966,30.3793096791231,39.7738264701405,14.207997990389,10.3850885836724,16.0370322274744,4.10922128611516,67.3701740219037,0.276242966807689,8.84071250867472,12.5642905924635,11.6700729313887,2.70719767744447,2.69553679865452,0.784349769176855,2.92278449306521,2.11103257785751,3.4120015221269,1.36074964221213,6.90930931526846,13.880452742126,4.87703587578935,4.51520796469368,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,3.93617574839647,0.650756789328606,5.46117361732928,0.366277859273374,0.165018999841176,2.87132768998086,3.25030123018261,19.2820715812991,11.6971569133468,13.864375540318,14.7363527737084,8.40803092155637,37.3822452141592,38.2844071933563,17.9828183847973,12.1083568479563,29.4207149342541,19.7955769386059,28.4576348862923,13.4539848537881,9.761756535243,131.276748628377,2.0911118104818,6.16067160352178,7.98459045475533,3.47973196830029,14.0846406518979,3.2918723950658,14.1420180356674,19.615524332561,13.5347437685916,2.303080121802,28.6719121982727,8.59148769400029,13.3441268833869,8.09426059124916,8.23611089208164,4.94812089851883,5.25674452090622,15.8510321173008,3.79132610615083,2.43816869544795,10.9671070334078,4.22600587027022,3.95849743083159,11.5952454202044,19.2113798254413,4.41092274836899,11.941901554342,12.7150756723591,21.4146947678674,17.0532635532125,14.8124575182774,5.88664646389525,7.60578126837052,6.45351084918232,17.6848273823618,23.1836183462813,3.19284957663538,12.6664581178598,36.881028011509,1.13841952129715,3.49934720244983,0.288666338176536,1.34060455107157,2.17781969722645,2.63602642174982,1.72202149068492,3.36942951335251,0.443430153536676,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0.568272293612826,71.623345421307,11.8785872333055,26.1086596784347,0,0.140669416410513,86.1529376877292,0,0,7.17292757703851,0.552567831062295,0,0.20453736500431,0,190.045188061364,0.359473404589307,0,0,4.53759665929895,0,6.66821940867821,0,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0.344743373241465,2.04123229368278,0.173624994933292,0,0.361789315876224,0,0,0,0.438770794307945,0,0,1.00035336054936,12.8754523107111,0,0,0,306.241113342643,39.2037699759971,1083.12666486987,0,0,0.166211681900156,0,0,0,0,0,2.95397290339238,0,5.51276978592369,0,0.995261931078505,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,3.21031058919516,0.234264445725339,0,0,0,11.0483632797829,3.62972148145992,0.61214552326098,1.5796644907122,0,0.103688191397247,0,0.330991955875499,0,0,1.42304773014896,0,0,0.293977192243133,0.435296032902013,3.66926003308263,0,0,0,0,2.23074737923365,0,1.12990370390266,2.19267079434801,0.794858446811959,0,0,0.320635281006135,1.06726497369676,4.19600180122473,0,0.114536596165916,0.686379991447858,0,0,0,0,0,0.611989305817931,4.33425884852278,0,0,0,17.6203830982182,0,10.0541664458012,1.3749625440701,5.0251111720377,0.399358000997982,1.71690419254628,1.11585728720936,0.806201669840715,60.8906803186662,2.32991899054908,4.96334048535509,5.10978321963232,4.11161617510528,4.0355267421047,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0.0607495566580247,0,0.315222829196793,0.367182116944987,0.950403028674658,5.73719485865103,0.575745591958336,1.42939065274673,1.98627591109629,0,21.1769844683948,18.1486513152266,23.8408772879869,2.39460383124975,0,43.1081695117117,0.679872549120754,3.81035807563014,3.97520666736664,0,0,0.342173675768659,0,2.88326013932776,2.35806457649499,8.28478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0.124980407962107,1.36484205787483,1.14186133417987,3.99951893486892,0,0,31.3435086062435,58.4283274618061,52.1517509812456,48.865975360973,64.9045186521644,79.1931987220917,27.9184883444247,50.3598976131586,14.7665340553641,9.1670192993573,7.32765128953031,13.0442902527445,13.3526142913583,28.614728341019,55.0292349135049,54.2614864284203,4.95850109690821,19.0402606084398,10.9855097965259,16.7300766466355,18.5820263683505,45.9393422279709,50.9562737534228,10.0006941165788,26.4414692990751,17.5109734158278,10.0947918582921,0.385239660814607,0.214441591374926,0,2.94717703165954,2.77826969188601,3.91578727210348,4.65630986811867,0.617602894321944,1.31570429747224,2.47364804324233,0,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0.194860308839388,0,0.163565394255844,8.19024622116032,0.737318726261158,0,0,0,0,1.13503190713367,1.65695355226657,0,3.11038630016486,0,0.107824811396682,30.8241246037557,0,0.509197589862076,5.52694792264376,6.32072397720911,0,30.8464220133816,0,0,35.6202703127591,7.04364597912361,0.0642292250964595,0,0,0.41023272848151,1.51243017733031,0,0.161475645631851,0,0,0,0,0.115525666150338,22.88292572803,0.690359926060101,0.397832444232549,0.376051641746286,39.1307833284829,0.781514011233092,0,5.2407013603231,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,5.45832296228224,6.33136479694634,0.127762427639595,0.535701835878287,0,0,0,14.0149744856969,0,22.2934412268644,0.0679697329768317,0.197318320688547,0,0.556157009460346,0.39246546425257,0,0,3.65263488203798,0.863710364874486,5.25526856675755,0.0714765441766563,0,0,1.39086617842064,5.61197955311177,12.0185375214561,9.9016716714491,3.45629830907046,0,1.41998400876678,1.44862788090568,52.4999942236752,13.746412112643,22.0246533821667,21.0218566575035,0,0,0,0,0.205325613712494,0,1.45713297917742,0,0,0.118920090777569,0,0,0,0.231522474323834,0.874238242015829,0,4.4126697915703,0,0.196308467114945,0,0.8453114551668,32.6260060200608,0,0.0644578879735772,0,0.178553938605658,5.64631794745107,0,1.46067277649303,0,0,0,0.135982980381829,0.872701380680755,3.1741610430924,49.4753374161779,11.5543907157855,28.5533531001701,0,0.327796715891087,1.0135880080915,0,0.26721740526556,0,0,0.757786982182394,0.535928260312357,0,0,1.0661699095049,0,0.193766729508018,0.496597714366863,2.69116470193472,0.0636471582781649,0.808468755832877,1.52401723527873,1.36893320434112,0.134704106029175,0.860666464712116,2.99394320891412,1.05824249194267,0,9.653614114347,0,7.03922827210363,0.611207220914332,1.62758471326295,0,1.20764276154616,0 | |||
|short_description=p10@FN1 | |||
}} |
Revision as of 08:20, 21 January 2014
Short description: | p10@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_AK297733_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | B4DN21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.67e-27 | 76 |
muscle precursor cell | 7.29e-18 | 58 |
myoblast | 7.29e-18 | 58 |
multi-potent skeletal muscle stem cell | 7.29e-18 | 58 |
muscle cell | 2.25e-16 | 55 |
multi fate stem cell | 9.30e-15 | 427 |
somatic stem cell | 1.85e-14 | 433 |
stem cell | 1.13e-13 | 441 |
electrically responsive cell | 9.50e-13 | 61 |
electrically active cell | 9.50e-13 | 61 |
mesodermal cell | 2.48e-12 | 121 |
smooth muscle cell | 2.05e-11 | 43 |
smooth muscle myoblast | 2.05e-11 | 43 |
skin fibroblast | 6.39e-11 | 23 |
embryonic cell | 1.07e-10 | 250 |
extraembryonic cell | 1.17e-09 | 19 |
vascular associated smooth muscle cell | 2.07e-09 | 32 |
preadipocyte | 9.90e-09 | 12 |
cardiocyte | 3.53e-08 | 16 |
stromal cell | 1.95e-07 | 28 |