FFCP PHASE1:Hg19::chr2:21225618..21225629,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=P04114 | |||
|association_with_transcript=11bp_to_M36676_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_23_at_APOB_5end | |||
|id=chr2:21225618..21225629,- | |||
|ontology_enrichment_celltype=CL:0000181!1.17e-37!12;CL:0000417!1.17e-37!12;CL:0000668!1.17e-37!12;CL:0000414!1.17e-37!12;CL:0000412!1.17e-37!12;CL:0000182!1.17e-37!12;CL:0000223!6.71e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.98e-46;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.93e-46,12;CL:0000223,2.15e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.42e-35;11!UBERON:0009497;1.40e-29;13!UBERON:0001041;7.05e-13;30!UBERON:0003104;1.92e-12;31!CL:0000223;3.48e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.45e-41!19;UBERON:0006925!1.45e-41!19;UBERON:0008836!1.45e-41!19;UBERON:0008835!8.18e-36!22;UBERON:0003894!8.18e-36!22;UBERON:0009854!3.14e-34!23;UBERON:0007499!1.94e-31!25;UBERON:0009497!1.94e-31!25;UBERON:0000015!1.94e-31!25;UBERON:0002423!1.94e-31!25;UBERON:0006235!1.94e-31!25;UBERON:0004161!1.94e-31!25;UBERON:0005057!3.32e-30!26;UBERON:0009856!3.32e-30!26;UBERON:0002365!3.18e-25!31;UBERON:0002330!3.18e-25!31;UBERON:0002368!2.92e-22!35;UBERON:0003929!7.87e-18!54;UBERON:0000949!3.78e-17!45;UBERON:0004921!1.21e-14!129;UBERON:0004185!1.21e-14!129;UBERON:0005172!6.88e-14!55;UBERON:0005173!6.88e-14!55;UBERON:0006122!1.61e-13!1;UBERON:0002530!6.81e-13!59;UBERON:0002417!1.92e-12!61;UBERON:0000916!1.92e-12!61;UBERON:0001007!6.28e-12!155;UBERON:0001555!6.28e-12!155;UBERON:0007026!6.28e-12!155;UBERON:0005911!2.12e-11!82;UBERON:0000160!5.91e-11!27;UBERON:0004119!8.29e-11!169;UBERON:0000925!8.29e-11!169;UBERON:0006595!8.29e-11!169;UBERON:0005409!1.66e-08!35;UBERON:0002108!4.65e-08!14;UBERON:0009569!5.52e-08!113;UBERON:0001041!2.01e-07!98;UBERON:0002950!2.12e-07!2;UBERON:0001891!2.12e-07!2;UBERON:0009616!2.12e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.90e-51;19!UBERON:0006925;5.90e-51;19!UBERON:0002423;1.23e-38;25!UBERON:0002365;6.88e-30;31!UBERON:0002330;6.88e-30;31!UBERON:0002108;8.41e-28;4!UBERON:0002368;2.26e-26;33!UBERON:0000949;2.67e-19;43!UBERON:0005172;1.56e-11;52!UBERON:0005173;1.56e-11;52!UBERON:0001007;5.95e-11;81!UBERON:0002417;3.81e-10;58!UBERON:0000916;3.81e-10;58!UBERON:0002530;4.68e-10;57!UBERON:0000160;3.48e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.53e-51,19;UBERON:0006925,5.53e-51,19;UBERON:0008836,5.53e-51,19;UBERON:0008835,5.56e-44,22;UBERON:0003894,5.56e-44,22;UBERON:0009854,4.72e-42,23;UBERON:0007499,1.17e-38,25;UBERON:0009497,1.17e-38,25;UBERON:0000015,1.17e-38,25;UBERON:0002423,1.17e-38,25;UBERON:0006235,1.17e-38,25;UBERON:0004161,1.17e-38,25;UBERON:0009856,3.74e-37,26;UBERON:0002365,4.32e-31,31;UBERON:0002330,4.32e-31,31;UBERON:0002108,6.99e-28,4;UBERON:0002368,1.75e-27,35;UBERON:0000949,2.90e-21,45;UBERON:0003929,1.26e-17,54;UBERON:0005172,1.26e-17,54;UBERON:0005173,1.26e-17,54;UBERON:0002530,4.39e-16,59;UBERON:0002417,8.32e-16,60;UBERON:0000916,8.32e-16,60;UBERON:0004921,1.36e-14,118;UBERON:0001007,1.06e-11,145;UBERON:0001555,1.06e-11,145;UBERON:0007026,1.06e-11,145;UBERON:0005911,2.14e-11,82;UBERON:0001041,1.05e-10,87;UBERON:0004119,1.65e-10,160;UBERON:0000925,1.65e-10,160;UBERON:0006595,1.65e-10,160;UBERON:0005177,4.00e-09,101;UBERON:0000160,3.31e-08,17;UBERON:0009569,3.70e-08,112;UBERON:0003914,8.87e-08,117;UBERON:0005256,1.98e-07,122;UBERON:0011216,4.07e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,4.91413608338813,1.77236972004421,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30265458457789,6.18118937858748,4.58344098208457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69783147837478,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@APOB | |||
}} |
Revision as of 01:58, 21 January 2014
Short description: | p23@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 11bp_to_M36676_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.93e-46 | 12 |
endodermal cell | 2.15e-09 | 58 |