FFCP PHASE1:Hg19::chr1:995067..995099,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc009vjs.1_5end | |||
|coexpression_cluster_id=C3732 | |||
|description=CAGE_peak_1_at_uc009vjs.1_5end | |||
|id=chr1:995067..995099,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.73e-11!71;CL:0000066!5.56e-11!254;CL:0002057!5.66e-11!42;CL:0002009!2.56e-10!65;CL:0000860!2.79e-10!45;CL:0000839!5.65e-10!70;CL:0002194!2.48e-09!63;CL:0000576!2.48e-09!63;CL:0000040!2.48e-09!63;CL:0000559!2.48e-09!63;CL:1000497!4.99e-09!18;CL:0002518!4.99e-09!18;CL:0000766!3.85e-08!76;CL:1000449!5.70e-08!16;CL:1000507!2.55e-07!12;CL:1000494!2.55e-07!12;CL:0000763!7.79e-07!112;CL:0000049!7.79e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.06e-22;33!CL:0002057;8.06e-22;33!CL:0000473;2.10e-18;39!CL:0000234;2.10e-18;39!CL:1000497;8.65e-13;17!CL:0002518;8.65e-13;17!CL:1000449;3.99e-11;15!CL:0000576;1.20e-10;48!CL:1000507;1.31e-10;10!CL:1000494;1.31e-10;10!CL:0002681;1.93e-08;12!CL:0002584;1.93e-08;12!CL:0000766;1.76e-07;69!CL:0000453;5.68e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.76e-17,67;CL:0000473,1.13e-16,48;CL:0000234,1.13e-16,48;CL:0000860,4.99e-16,42;CL:0002057,4.99e-16,42;CL:0002009,1.82e-15,61;CL:0000839,5.97e-15,66;CL:0002194,6.38e-14,59;CL:0000576,6.38e-14,59;CL:0000040,6.38e-14,59;CL:0000559,6.38e-14,59;CL:1000497,1.02e-12,17;CL:0002518,1.02e-12,17;CL:0000766,1.61e-12,72;CL:1000449,4.03e-11,15;CL:0000763,1.13e-10,108;CL:0000049,1.13e-10,108;CL:1000507,1.56e-10,10;CL:1000494,1.56e-10,10;CL:0002681,1.97e-08,12;CL:0002584,1.97e-08,12;CL:0000066,2.57e-07,253;CL:0000453,6.12e-07,5;CL:0002031,8.00e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-12;42 | |||
|ontology_enrichment_disease=DOID:305!6.20e-08!106;DOID:0050687!6.08e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.51e-10!86;UBERON:0002371!3.99e-09!80;UBERON:0004765!7.19e-09!101;UBERON:0001434!7.19e-09!101;UBERON:0004211!5.70e-08!16;UBERON:0001285!5.70e-08!16;UBERON:0007684!5.70e-08!16;UBERON:0003220!5.70e-08!16;UBERON:0004208!5.70e-08!16;UBERON:0006555!2.14e-07!17;UBERON:0005103!2.14e-07!17;UBERON:0000083!2.14e-07!17;UBERON:0009201!2.14e-07!17;UBERON:0004819!2.14e-07!17;UBERON:0006553!2.14e-07!17;UBERON:0003074!2.14e-07!17;UBERON:0003060!2.14e-07!17;UBERON:0009773!2.55e-07!12;UBERON:0001231!2.55e-07!12;UBERON:0004810!2.55e-07!12;UBERON:0000058!3.51e-07!26;UBERON:0002113!7.71e-07!27;UBERON:0003918!7.71e-07!27;UBERON:0005095!7.71e-07!27;UBERON:0007687!7.71e-07!27;UBERON:0001851!9.23e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.99e-11;15!UBERON:0004819;3.99e-11;15!UBERON:0001285;3.99e-11;15!UBERON:0007684;3.99e-11;15!UBERON:0002113;1.01e-10;24!UBERON:0011143;1.01e-10;24!UBERON:0004211;1.31e-10;10!UBERON:0009773;1.31e-10;10!UBERON:0001231;1.31e-10;10!UBERON:0004810;1.31e-10;10!UBERON:0006554;4.90e-09;30!UBERON:0001008;4.90e-09;30!UBERON:0001851;8.41e-09;15!UBERON:0000489;1.19e-08;29!UBERON:0001225;1.93e-08;12!UBERON:0008987;1.93e-08;12!UBERON:0000353;1.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.70e-15,90;UBERON:0001474,4.21e-15,82;UBERON:0002371,4.13e-14,76;UBERON:0001434,3.49e-13,100;UBERON:0004211,4.03e-11,15;UBERON:0009773,4.03e-11,15;UBERON:0001231,4.03e-11,15;UBERON:0001285,4.03e-11,15;UBERON:0007684,4.03e-11,15;UBERON:0004208,4.03e-11,15;UBERON:0002405,1.10e-10,93;UBERON:0004810,1.56e-10,10;UBERON:0006555,4.10e-10,16;UBERON:0004819,4.10e-10,16;UBERON:0002113,1.66e-09,26;UBERON:0003918,1.66e-09,26;UBERON:0011143,1.66e-09,26;UBERON:0005095,1.66e-09,26;UBERON:0007687,1.66e-09,26;UBERON:0002390,5.99e-09,98;UBERON:0003061,5.99e-09,98;UBERON:0001851,9.65e-09,15;UBERON:0001225,1.97e-08,12;UBERON:0008987,1.97e-08,12;UBERON:0000489,6.90e-08,31;UBERON:0002193,9.32e-08,108;UBERON:0000353,1.34e-07,15 | |||
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| |||
|short_description=p1@uc009vjs.1 | |||
}} |
Revision as of 15:44, 10 January 2014
Short description: | p1@uc009vjs.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc009vjs.1_5end |
Coexpression cluster: | C3732_migratory_immature_CD14_Astrocyte_papillotubular_clear_mycosis |
Association with transcript: | 0bp_to_uc009vjs.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 5.76e-17 | 67 |
defensive cell | 1.13e-16 | 48 |
phagocyte | 1.13e-16 | 48 |
classical monocyte | 4.99e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.99e-16 | 42 |
macrophage dendritic cell progenitor | 1.82e-15 | 61 |
myeloid lineage restricted progenitor cell | 5.97e-15 | 66 |
monopoietic cell | 6.38e-14 | 59 |
monocyte | 6.38e-14 | 59 |
monoblast | 6.38e-14 | 59 |
promonocyte | 6.38e-14 | 59 |
kidney cell | 1.02e-12 | 17 |
kidney epithelial cell | 1.02e-12 | 17 |
myeloid leukocyte | 1.61e-12 | 72 |
epithelial cell of nephron | 4.03e-11 | 15 |
myeloid cell | 1.13e-10 | 108 |
common myeloid progenitor | 1.13e-10 | 108 |
kidney tubule cell | 1.56e-10 | 10 |
nephron tubule epithelial cell | 1.56e-10 | 10 |
kidney cortical cell | 1.97e-08 | 12 |
renal cortical epithelial cell | 1.97e-08 | 12 |
epithelial cell | 2.57e-07 | 253 |
Langerhans cell | 6.12e-07 | 5 |
hematopoietic lineage restricted progenitor cell | 8.00e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 3.70e-15 | 90 |
bone element | 4.21e-15 | 82 |
bone marrow | 4.13e-14 | 76 |
skeletal system | 3.49e-13 | 100 |
nephron epithelium | 4.03e-11 | 15 |
renal tubule | 4.03e-11 | 15 |
nephron tubule | 4.03e-11 | 15 |
nephron | 4.03e-11 | 15 |
uriniferous tubule | 4.03e-11 | 15 |
nephrogenic mesenchyme | 4.03e-11 | 15 |
immune system | 1.10e-10 | 93 |
nephron tubule epithelium | 1.56e-10 | 10 |
excretory tube | 4.10e-10 | 16 |
kidney epithelium | 4.10e-10 | 16 |
kidney | 1.66e-09 | 26 |
kidney mesenchyme | 1.66e-09 | 26 |
upper urinary tract | 1.66e-09 | 26 |
kidney rudiment | 1.66e-09 | 26 |
kidney field | 1.66e-09 | 26 |
hematopoietic system | 5.99e-09 | 98 |
blood island | 5.99e-09 | 98 |
cortex | 9.65e-09 | 15 |
cortex of kidney | 1.97e-08 | 12 |
renal parenchyma | 1.97e-08 | 12 |
cavitated compound organ | 6.90e-08 | 31 |
hemolymphoid system | 9.32e-08 | 108 |
parenchyma | 1.34e-07 | 15 |