FFCP PHASE1:Hg19::chr1:160039940..160039963,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3766 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6256 | |||
|TSSclassifier=strong | |||
|UniProt=P78508 | |||
|association_with_transcript=0bp_to_uc001fuw.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_KCNJ10_5end | |||
|id=chr1:160039940..160039963,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.12e-20;82!UBERON:0006241;9.10e-10;3!UBERON:0003057;9.10e-10;3!UBERON:0006215;3.83e-09;3!UBERON:0010122;9.86e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.09e-85!57;UBERON:0005068!2.09e-85!57;UBERON:0006241!2.09e-85!57;UBERON:0007135!2.09e-85!57;UBERON:0001017!6.07e-75!82;UBERON:0005743!2.29e-73!86;UBERON:0002616!1.95e-71!59;UBERON:0007023!1.66e-69!115;UBERON:0002780!1.20e-68!41;UBERON:0001890!1.20e-68!41;UBERON:0006240!1.20e-68!41;UBERON:0000073!1.42e-67!94;UBERON:0001016!1.42e-67!94;UBERON:0003080!9.48e-67!42;UBERON:0000955!1.05e-66!69;UBERON:0006238!1.05e-66!69;UBERON:0001893!2.87e-63!34;UBERON:0002020!3.73e-63!34;UBERON:0003528!3.73e-63!34;UBERON:0002791!3.03e-61!33;UBERON:0003075!1.08e-60!86;UBERON:0007284!1.08e-60!86;UBERON:0001869!7.16e-59!32;UBERON:0002346!2.83e-57!90;UBERON:0003056!4.99e-47!61;UBERON:0000956!1.81e-45!25;UBERON:0000203!1.81e-45!25;UBERON:0000153!3.30e-42!129;UBERON:0007811!3.30e-42!129;UBERON:0000033!7.20e-42!123;UBERON:0002619!1.09e-40!22;UBERON:0001950!9.59e-37!20;UBERON:0004121!3.28e-35!169;UBERON:0000924!5.52e-34!173;UBERON:0006601!5.52e-34!173;UBERON:0000025!9.28e-25!194;UBERON:0004111!8.73e-21!241;UBERON:0003076!6.89e-19!15;UBERON:0003057!6.89e-19!15;UBERON:0002308!9.07e-19!9;UBERON:0000125!9.07e-19!9;UBERON:0000477!1.18e-18!286;UBERON:0002420!1.26e-18!9;UBERON:0007245!1.26e-18!9;UBERON:0010009!1.26e-18!9;UBERON:0010011!1.26e-18!9;UBERON:0000454!1.26e-18!9;UBERON:0004732!2.16e-15!13;UBERON:0009663!7.99e-15!7;UBERON:0000475!1.59e-14!365;UBERON:0000064!2.96e-14!219;UBERON:0000483!1.07e-13!309;UBERON:0004733!1.61e-13!12;UBERON:0002028!1.61e-13!12;UBERON:0007277!1.61e-13!12;UBERON:0002298!1.67e-13!8;UBERON:0000119!2.15e-13!312;UBERON:0000200!4.48e-13!6;UBERON:0000062!6.44e-13!511;UBERON:0001871!9.07e-13!7;UBERON:0000481!1.83e-11!347;UBERON:0000349!2.51e-11!5;UBERON:0002021!5.29e-11!5;UBERON:0001872!9.38e-11!5;UBERON:0000467!1.68e-09!625;UBERON:0000480!1.90e-09!626;UBERON:0000922!4.28e-09!612;UBERON:0000369!4.93e-09!4;UBERON:0002435!4.93e-09!4;UBERON:0000204!4.93e-09!4;UBERON:0010082!4.93e-09!4;UBERON:0000923!6.00e-09!604;UBERON:0005291!6.00e-09!604;UBERON:0006598!6.00e-09!604;UBERON:0002532!6.00e-09!604;UBERON:0002050!6.78e-09!605;UBERON:0005423!6.78e-09!605;UBERON:0002680!2.66e-08!9;UBERON:0001895!2.66e-08!9;UBERON:0010092!2.66e-08!9;UBERON:0000468!2.66e-08!659;UBERON:0006331!9.44e-08!3;UBERON:0000988!1.10e-07!3;UBERON:0001896!1.68e-07!3;UBERON:0005290!1.68e-07!3;UBERON:0010096!1.68e-07!3;UBERON:0002771!1.72e-07!3;UBERON:0001894!1.87e-07!7;UBERON:0006222!1.87e-07!7;UBERON:0002240!2.26e-07!3;UBERON:0005383!4.49e-07!3;UBERON:0005382!4.49e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.08e-72;34!UBERON:0003528;3.15e-71;34!UBERON:0002020;3.15e-71;34!UBERON:0002791;4.61e-70;32!UBERON:0001869;8.17e-70;32!UBERON:0002780;1.31e-62;41!UBERON:0001890;1.31e-62;41!UBERON:0000073;6.63e-60;53!UBERON:0002616;6.63e-60;53!UBERON:0000956;3.41e-59;25!UBERON:0000203;3.41e-59;25!UBERON:0002619;3.42e-57;22!UBERON:0001950;1.35e-51;20!UBERON:0000955;5.64e-41;68!UBERON:0001017;1.06e-40;75!UBERON:0001016;2.28e-35;83!UBERON:0000125;7.40e-26;9!UBERON:0002308;7.40e-26;9!UBERON:0002420;1.25e-25;9!UBERON:0007245;1.25e-25;9!UBERON:0010009;1.25e-25;9!UBERON:0010011;1.25e-25;9!UBERON:0000454;1.25e-25;9!UBERON:0004732;1.33e-21;13!UBERON:0009663;2.85e-20;7!UBERON:0004733;6.16e-19;12!UBERON:0002028;6.16e-19;12!UBERON:0002298;1.85e-18;6!UBERON:0000200;8.10e-18;6!UBERON:0007023;1.86e-16;114!UBERON:0000349;2.58e-15;5!UBERON:0002021;6.78e-15;5!UBERON:0001871;7.75e-15;6!UBERON:0001872;1.42e-14;5!UBERON:0011216;6.85e-13;132!UBERON:0000369;4.45e-12;4!UBERON:0002435;4.45e-12;4!UBERON:0000204;4.45e-12;4!UBERON:0002680;1.67e-11;9!UBERON:0001895;1.67e-11;9!UBERON:0000988;3.24e-10;3!UBERON:0001896;5.83e-10;3!UBERON:0005290;5.83e-10;3!UBERON:0002240;9.10e-10;3!UBERON:0005174;9.10e-10;3!UBERON:0001137;9.10e-10;3!UBERON:0001870;9.80e-10;3!UBERON:0005383;2.49e-09;3!UBERON:0005382;2.49e-09;3!UBERON:0010314;1.13e-08;132!UBERON:0005162;1.33e-07;2!UBERON:0000122;1.33e-07;2!UBERON:0002148;2.78e-07;2!UBERON:0006331;2.78e-07;2!UBERON:0009662;2.78e-07;2!UBERON:0001954;3.44e-07;2!UBERON:0003022;3.44e-07;2!UBERON:0002421;3.44e-07;2!UBERON:0002600;3.44e-07;2!UBERON:0001897;3.55e-07;2!UBERON:0010225;3.55e-07;2!UBERON:0002784;3.61e-07;4!UBERON:0002771;4.19e-07;2!UBERON:0001894;4.58e-07;7!UBERON:0001876;4.79e-07;2!UBERON:0002702;5.40e-07;2!UBERON:0001875;6.84e-07;2!UBERON:0006514;6.84e-07;2!UBERON:0001873;9.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.23e-115,56;UBERON:0005068,5.23e-115,56;UBERON:0006241,5.23e-115,56;UBERON:0007135,5.23e-115,56;UBERON:0000073,1.83e-106,53;UBERON:0002616,1.83e-106,53;UBERON:0001017,3.97e-100,81;UBERON:0001016,9.29e-93,89;UBERON:0000955,3.43e-91,68;UBERON:0006238,3.43e-91,68;UBERON:0002780,5.87e-88,41;UBERON:0001890,5.87e-88,41;UBERON:0003080,5.87e-88,41;UBERON:0006240,5.87e-88,41;UBERON:0001893,2.58e-84,34;UBERON:0003528,3.70e-84,34;UBERON:0002020,3.70e-84,34;UBERON:0003075,6.60e-82,82;UBERON:0007284,6.60e-82,82;UBERON:0002791,2.34e-78,32;UBERON:0001869,4.06e-78,32;UBERON:0002346,1.53e-77,86;UBERON:0003056,4.19e-63,61;UBERON:0010371,5.17e-62,104;UBERON:0000956,3.41e-59,25;UBERON:0000203,3.41e-59,25;UBERON:0002619,3.57e-57,22;UBERON:0007023,2.71e-54,114;UBERON:0001950,1.41e-51,20;UBERON:0010314,1.91e-48,132;UBERON:0004121,2.66e-44,171;UBERON:0000924,2.66e-44,171;UBERON:0006601,2.66e-44,171;UBERON:0011216,1.58e-42,223;UBERON:0000025,2.14e-30,192;UBERON:0003076,1.47e-26,15;UBERON:0003057,1.47e-26,15;UBERON:0000125,6.98e-26,9;UBERON:0002308,6.98e-26,9;UBERON:0002420,1.11e-25,9;UBERON:0007245,1.11e-25,9;UBERON:0010009,1.11e-25,9;UBERON:0010011,1.11e-25,9;UBERON:0000454,1.11e-25,9;UBERON:0004111,9.92e-22,240;UBERON:0004732,1.37e-21,13;UBERON:0009663,2.69e-20,7;UBERON:0004733,6.36e-19,12;UBERON:0002028,6.36e-19,12;UBERON:0007277,6.36e-19,12;UBERON:0002298,1.87e-18,6;UBERON:0000200,7.99e-18,6;UBERON:0000483,4.59e-16,306;UBERON:0000119,8.82e-16,309;UBERON:0000349,2.36e-15,5;UBERON:0002021,6.78e-15,5;UBERON:0001871,7.75e-15,6;UBERON:0001872,1.52e-14,5;UBERON:0000369,4.08e-12,4;UBERON:0002435,4.08e-12,4;UBERON:0000204,4.08e-12,4;UBERON:0010082,4.08e-12,4;UBERON:0002680,1.70e-11,9;UBERON:0001895,1.70e-11,9;UBERON:0010092,1.70e-11,9;UBERON:0000988,3.24e-10,3;UBERON:0001896,5.91e-10,3;UBERON:0005290,5.91e-10,3;UBERON:0010096,5.91e-10,3;UBERON:0002240,8.97e-10,3;UBERON:0005174,8.97e-10,3;UBERON:0001137,8.97e-10,3;UBERON:0001870,9.52e-10,3;UBERON:0000922,2.08e-09,592;UBERON:0005383,2.35e-09,3;UBERON:0005382,2.35e-09,3;UBERON:0005423,3.26e-09,581;UBERON:0000923,7.91e-09,560;UBERON:0010316,7.91e-09,560;UBERON:0005291,7.91e-09,560;UBERON:0006598,7.91e-09,560;UBERON:0010317,7.91e-09,560;UBERON:0002532,7.91e-09,560;UBERON:0002050,1.17e-08,564;UBERON:0005162,1.33e-07,2;UBERON:0000122,1.33e-07,2;UBERON:0002148,2.78e-07,2;UBERON:0006331,2.78e-07,2;UBERON:0009662,2.78e-07,2;UBERON:0001954,3.44e-07,2;UBERON:0003022,3.44e-07,2;UBERON:0002421,3.44e-07,2;UBERON:0002600,3.44e-07,2;UBERON:0001897,3.55e-07,2;UBERON:0010225,3.55e-07,2;UBERON:0002784,3.65e-07,4;UBERON:0002771,4.25e-07,2;UBERON:0001876,4.51e-07,2;UBERON:0001894,4.62e-07,7;UBERON:0006222,4.62e-07,7;UBERON:0002702,5.24e-07,2;UBERON:0001875,7.04e-07,2;UBERON:0006514,7.04e-07,2;UBERON:0001873,9.44e-07,2;UBERON:0010122,9.44e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43483184557268,0.547497700291537,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36500389808645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7047312111232,2.60279707715243,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8888053075597,47.4055933303428,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0,0,0,56.2212992735227,31.170080982382,3.99227596002388,0,0,0,0,0,0,0,0,0,17.7148277162768,27.6165844452184,12.2065389053667,27.5342357228749,15.0729285666309,23.2548520983211,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,82.7011901672907,0.802577647298789,55.0521447454547,0,0,0,0.394584402849391,0,1.22429104652196,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,38.5562747371301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4142898161328,35.3215877541342,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,2.04836273998782,2.30764403467266,2.02210631562555,0,0,19.0855125554233,59.9294986890933,0,0,0,0,0,35.5992402016025,0,4.80714814525109,3.72427575758487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,36.3285107375957,49.058295246538,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,18.6074317793067,18.4259660001964,42.1893436480904,17.2022758707021,42.042110532467,60.730282076673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.5382057376577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.5009734343226,18.420554922326,43.1011419454308,47.1767637753737,2.7727886584389,39.0046903898189,37.6238254322213,48.5416028881125,0,0,0,0,0,0,0,0,0,0,0,0,0,39.2393366632873,17.1837181695046,40.9239857072344,43.566661603214,1.09394961803644,0.548257766857182,0,0,0,0.535701835878287,2.35398605553177,0,0,0,0,0,51.7249667953689,33.8729783848673,0,0,0.156986185701028,23.5673384874003,0,0.913158720509496,0,0,2.57315559035963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,40.6358526927937,35.9426144395774,28.3179337480878,0,3.10146929333517,5.15663103788617,0,0,0,0,0,0.458729283404541,61.4926811719726,0,41.6787834870307,1.74540276136151,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,21.5584054259283,53.8885908440474,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.404112318087525,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p1@KCNJ10 | |||
}} |
Revision as of 21:43, 10 January 2014
Short description: | p1@KCNJ10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNJ10_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_uc001fuw.1_5end |
EntrezGene: | KCNJ10 |
HGNC: | 6256 |
UniProt: | P78508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data