FFCP PHASE1:Hg19::chr1:147232748..147232762,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2702 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4279 | |||
|TSSclassifier=strong | |||
|UniProt=P36382 | |||
|association_with_transcript=-34bp_to_NM_181703,uc001eps.1_5end | |||
|coexpression_cluster_id=C3510 | |||
|description=CAGE_peak_3_at_GJA5_5end | |||
|id=chr1:147232748..147232762,- | |||
|ontology_enrichment_celltype=CL:0002159!2.80e-13!13;CL:0000066!1.30e-10!254;CL:0000349!1.48e-10!3;CL:0002577!1.48e-10!3;CL:0002077!1.95e-10!33;CL:0002541!1.96e-10!3;CL:0000197!1.41e-08!6;CL:0000098!1.41e-08!6;CL:0002167!1.41e-08!6;CL:0002536!1.11e-07!2;CL:0000039!2.12e-07!7;CL:0000586!2.12e-07!7;CL:0002327!2.63e-07!4;CL:0000317!4.87e-07!2;CL:1000448!4.87e-07!2;CL:0002308!4.87e-07!2;CL:0002140!4.87e-07!2;CL:0000575!9.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.54e-38;19!CL:0002577;1.35e-19;3!CL:0002541;2.29e-19;3!CL:0000197;2.86e-16;6!CL:0000098;2.86e-16;6!CL:0002167;2.86e-16;6!CL:0002536;7.56e-14;2!CL:0000317;1.37e-12;2!CL:1000448;1.37e-12;2!CL:0002308;1.37e-12;2!CL:0002140;1.37e-12;2!CL:0002537;6.46e-12;5!CL:0000362;1.21e-10;9!CL:0002077;1.78e-09;34!CL:0000039;8.62e-09;7!CL:0000586;8.62e-09;7!CL:0002159;6.93e-07;14!CL:0002327;8.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.08e-38,19;CL:0002577,1.31e-19,3;CL:0002541,2.29e-19,3;CL:0000197,2.81e-16,6;CL:0000098,2.81e-16,6;CL:0002167,2.81e-16,6;CL:0002536,7.57e-14,2;CL:0000317,1.46e-12,2;CL:1000448,1.46e-12,2;CL:0002308,1.46e-12,2;CL:0002140,1.46e-12,2;CL:0002537,6.00e-12,5;CL:0000362,1.26e-10,9;CL:0002077,5.05e-10,34;CL:0000039,8.62e-09,7;CL:0000586,8.62e-09,7;CL:0002159,7.10e-07,14;CL:0002327,7.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.38e-07;1!UBERON:0010227;3.96e-07;1!UBERON:0004140;3.96e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.07e-07;1!DOID:10165;2.07e-07;1!DOID:1798;2.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.21e-07,1;DOID:10165,2.21e-07,1;DOID:1798,2.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.00e-31!14;UBERON:0000158!3.00e-31!14;UBERON:0003124!3.69e-22!7;UBERON:0000478!6.05e-17!24;UBERON:0001987!1.87e-13!4;UBERON:0004340!1.87e-13!4;UBERON:0000305!1.16e-11!7;UBERON:0000476!1.96e-10!3;UBERON:0000920!1.96e-10!3;UBERON:0004871!3.81e-10!8;UBERON:0004923!9.23e-09!57;UBERON:0001911!2.63e-07!4;UBERON:0005333!2.63e-07!4;UBERON:0008425!2.63e-07!4;UBERON:0005311!2.63e-07!4;UBERON:0002419!4.87e-07!2;UBERON:0007771!4.87e-07!2;UBERON:0003297!4.87e-07!2;UBERON:0001821!4.87e-07!2;UBERON:0003487!4.87e-07!2;UBERON:0001820!4.87e-07!2;UBERON:0005089!4.87e-07!2;UBERON:0005088!4.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.20e-39;10!UBERON:0000158;4.20e-39;10!UBERON:0000478;2.42e-35;24!UBERON:0001987;1.91e-25;4!UBERON:0000305;1.67e-22;7!UBERON:0003124;2.29e-19;3!UBERON:0000920;2.29e-19;3!UBERON:0002419;1.37e-12;2!UBERON:0007771;1.37e-12;2!UBERON:0003297;1.37e-12;2!UBERON:0001821;1.37e-12;2!UBERON:0003487;1.37e-12;2!UBERON:0001820;1.37e-12;2!UBERON:0002079;3.96e-07;1!UBERON:0001911;8.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.81e-62,14;UBERON:0000158,2.81e-62,14;UBERON:0003124,5.06e-43,7;UBERON:0000478,2.28e-35,24;UBERON:0001987,1.91e-25,4;UBERON:0004340,1.91e-25,4;UBERON:0000305,1.53e-22,7;UBERON:0004871,1.06e-19,8;UBERON:0000920,2.29e-19,3;UBERON:0002419,1.46e-12,2;UBERON:0007771,1.46e-12,2;UBERON:0003297,1.46e-12,2;UBERON:0001821,1.46e-12,2;UBERON:0003487,1.46e-12,2;UBERON:0001820,1.46e-12,2;UBERON:0005089,1.46e-12,2;UBERON:0005088,1.46e-12,2;UBERON:0004923,2.29e-11,66;UBERON:0000995,3.10e-07,21;UBERON:0002079,3.62e-07,1;UBERON:0005795,6.79e-07,22;UBERON:0003975,6.79e-07,22;UBERON:0001911,7.49e-07,4;UBERON:0005333,7.49e-07,4;UBERON:0008425,7.49e-07,4;UBERON:0005311,7.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,7.20856528029568,17.4086205630779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0,0,0.330881918197182,0.653638332277218,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,3.62175941848464,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,1.79117045405697,0.290633938513962,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,1.24900292158013,5.51958452618771,3.39710103478868,0,0,0,0,0.184369168541703,0,0,0,0,0,0,3.33440328590885,9.98612637062982,17.8410273064511,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,2.06082023295445,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1234052182667,0,4.53614521001611,5.93929361665277,14.7437137007631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09163045303809,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,12.6810147413433,8.16794564128926,10.9733845641228,2.87101043758728,5.03786763710243,25.0526344728758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04707223031409,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0.617602894321944,0.657852148736121,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14288033377707,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GJA5 | |||
}} |
Revision as of 20:35, 10 January 2014
Short description: | p3@GJA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GJA5_5end |
Coexpression cluster: | C3510_chorionic_choriocarcinoma_Amniotic_pancreatic_placenta_amniotic_Placental |
Association with transcript: | -34bp_to_NM_181703, uc001eps.1_5end |
EntrezGene: | GJA5 |
HGNC: | 4279 |
UniProt: | P36382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.08e-38 | 19 |
placental epithelial cell | 1.31e-19 | 3 |
chorionic membrane mesenchymal stem cell | 2.29e-19 | 3 |
receptor cell | 2.81e-16 | 6 |
sensory epithelial cell | 2.81e-16 | 6 |
olfactory epithelial cell | 2.81e-16 | 6 |
amniotic epithelial cell | 7.57e-14 | 2 |
sebum secreting cell | 1.46e-12 | 2 |
epithelial cell of sweat gland | 1.46e-12 | 2 |
epithelial cell of skin gland | 1.46e-12 | 2 |
acinar cell of sebaceous gland | 1.46e-12 | 2 |
amnion mesenchymal stem cell | 6.00e-12 | 5 |
epidermal cell | 1.26e-10 | 9 |
ecto-epithelial cell | 5.05e-10 | 34 |
germ line cell | 8.62e-09 | 7 |
germ cell | 8.62e-09 | 7 |
general ecto-epithelial cell | 7.10e-07 | 14 |
mammary gland epithelial cell | 7.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.81e-62 | 14 |
membranous layer | 2.81e-62 | 14 |
chorion | 5.06e-43 | 7 |
extraembryonic structure | 2.28e-35 | 24 |
placenta | 1.91e-25 | 4 |
allantois | 1.91e-25 | 4 |
amnion | 1.53e-22 | 7 |
somatic layer of lateral plate mesoderm | 1.06e-19 | 8 |
egg chorion | 2.29e-19 | 3 |
skin gland | 1.46e-12 | 2 |
epidermis gland | 1.46e-12 | 2 |
gland of integumental system | 1.46e-12 | 2 |
sebaceous gland | 1.46e-12 | 2 |
skin sebaceous gland | 1.46e-12 | 2 |
sweat gland | 1.46e-12 | 2 |
sweat gland placode | 1.46e-12 | 2 |
sebaceous gland placode | 1.46e-12 | 2 |
organ component layer | 2.29e-11 | 66 |
uterus | 3.10e-07 | 21 |
left cardiac atrium | 3.62e-07 | 1 |
embryonic uterus | 6.79e-07 | 22 |
internal female genitalia | 6.79e-07 | 22 |
mammary gland | 7.49e-07 | 4 |
mammary bud | 7.49e-07 | 4 |
mammary ridge | 7.49e-07 | 4 |
mammary placode | 7.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.21e-07 | 1 |
endocrine pancreas cancer | 2.21e-07 | 1 |
pancreatic endocrine carcinoma | 2.21e-07 | 1 |