FFCP PHASE1:Hg19::chr19:16830774..16830814,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284434 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27619 | |||
|TSSclassifier=strong | |||
|UniProt=C9J2Y8,E5RJJ1,Q149M9 | |||
|association_with_transcript=0bp_to_ENST00000420818,ENST00000518676,ENST00000524140,NM_001007525,uc002net.3,uc002neu.3_5end | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_1_at_NWD1_5end | |||
|id=chr19:16830774..16830814,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.13e-19;82!UBERON:0006241;1.18e-09;3!UBERON:0003057;1.18e-09;3!UBERON:0010122;9.11e-08;2!UBERON:0007297;4.06e-07;2!UBERON:0002532;5.84e-07;206!UBERON:0010316;5.84e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.94e-59!115;UBERON:0001049!2.38e-53!57;UBERON:0005068!2.38e-53!57;UBERON:0006241!2.38e-53!57;UBERON:0007135!2.38e-53!57;UBERON:0001017!3.78e-47!82;UBERON:0000955!6.90e-47!69;UBERON:0006238!6.90e-47!69;UBERON:0005743!2.74e-46!86;UBERON:0002616!1.30e-45!59;UBERON:0002780!6.03e-42!41;UBERON:0001890!6.03e-42!41;UBERON:0006240!6.03e-42!41;UBERON:0003080!1.06e-40!42;UBERON:0000073!2.25e-40!94;UBERON:0001016!2.25e-40!94;UBERON:0002346!3.08e-38!90;UBERON:0003075!2.28e-37!86;UBERON:0007284!2.28e-37!86;UBERON:0002020!6.39e-37!34;UBERON:0003528!6.39e-37!34;UBERON:0001893!6.39e-37!34;UBERON:0002791!2.61e-35!33;UBERON:0001869!1.03e-33!32;UBERON:0000153!2.58e-29!129;UBERON:0007811!2.58e-29!129;UBERON:0000033!9.21e-29!123;UBERON:0000924!6.12e-27!173;UBERON:0006601!6.12e-27!173;UBERON:0003056!1.41e-26!61;UBERON:0002619!1.77e-26!22;UBERON:0004121!6.33e-26!169;UBERON:0001950!4.62e-23!20;UBERON:0000956!1.08e-22!25;UBERON:0000203!1.08e-22!25;UBERON:0002308!1.54e-16!9;UBERON:0000125!1.54e-16!9;UBERON:0002420!1.81e-16!9;UBERON:0007245!1.81e-16!9;UBERON:0010009!1.81e-16!9;UBERON:0010011!1.81e-16!9;UBERON:0000454!1.81e-16!9;UBERON:0004111!1.94e-15!241;UBERON:0000025!1.22e-14!194;UBERON:0000475!8.71e-14!365;UBERON:0003076!2.44e-13!15;UBERON:0003057!2.44e-13!15;UBERON:0000477!3.79e-13!286;UBERON:0009663!4.24e-13!7;UBERON:0000062!1.57e-12!511;UBERON:0002298!1.04e-11!8;UBERON:0000200!1.33e-11!6;UBERON:0000483!4.54e-11!309;UBERON:0000119!8.67e-11!312;UBERON:0000349!2.31e-10!5;UBERON:0001872!1.21e-09!5;UBERON:0000922!1.84e-09!612;UBERON:0004733!3.18e-09!12;UBERON:0002028!3.18e-09!12;UBERON:0007277!3.18e-09!12;UBERON:0002050!7.62e-09!605;UBERON:0005423!7.62e-09!605;UBERON:0000369!1.39e-08!4;UBERON:0002435!1.39e-08!4;UBERON:0000204!1.39e-08!4;UBERON:0010082!1.39e-08!4;UBERON:0001871!1.65e-08!7;UBERON:0000923!2.23e-08!604;UBERON:0005291!2.23e-08!604;UBERON:0006598!2.23e-08!604;UBERON:0002532!2.23e-08!604;UBERON:0004732!2.24e-08!13;UBERON:0000481!3.21e-08!347;UBERON:0000468!7.96e-08!659;UBERON:0000064!2.04e-07!219;UBERON:0000467!3.18e-07!625;UBERON:0001896!3.22e-07!3;UBERON:0005290!3.22e-07!3;UBERON:0010096!3.22e-07!3;UBERON:0000480!3.60e-07!626;UBERON:0005383!8.04e-07!3;UBERON:0005382!8.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.64e-52;34!UBERON:0002020;1.64e-52;34!UBERON:0001893;6.99e-52;34!UBERON:0001869;8.95e-49;32!UBERON:0002791;1.23e-48;32!UBERON:0002619;1.28e-46;22!UBERON:0002780;2.06e-46;41!UBERON:0001890;2.06e-46;41!UBERON:0000073;2.51e-45;53!UBERON:0002616;2.51e-45;53!UBERON:0000956;1.24e-40;25!UBERON:0000203;1.24e-40;25!UBERON:0001950;1.43e-40;20!UBERON:0000955;1.63e-32;68!UBERON:0001017;9.23e-32;75!UBERON:0001016;8.80e-24;83!UBERON:0000125;2.71e-22;9!UBERON:0002308;2.71e-22;9!UBERON:0002420;4.12e-22;9!UBERON:0007245;4.12e-22;9!UBERON:0010009;4.12e-22;9!UBERON:0010011;4.12e-22;9!UBERON:0000454;4.12e-22;9!UBERON:0002298;5.85e-20;6!UBERON:0000200;4.27e-19;6!UBERON:0007023;1.67e-18;114!UBERON:0000349;7.03e-17;5!UBERON:0009663;2.14e-16;7!UBERON:0001872;8.57e-16;5!UBERON:0000369;9.35e-14;4!UBERON:0002435;9.35e-14;4!UBERON:0000204;9.35e-14;4!UBERON:0004733;1.24e-12;12!UBERON:0002028;1.24e-12;12!UBERON:0004732;1.41e-11;13!UBERON:0001896;1.83e-11;3!UBERON:0005290;1.83e-11;3!UBERON:0001871;2.08e-11;6!UBERON:0001870;6.81e-11;3!UBERON:0005383;1.20e-10;3!UBERON:0005382;1.20e-10;3!UBERON:0000988;3.04e-10;3!UBERON:0011216;5.75e-10;132!UBERON:0002240;1.18e-09;3!UBERON:0005174;1.18e-09;3!UBERON:0001137;1.18e-09;3!UBERON:0002702;5.09e-08;2!UBERON:0001954;6.01e-08;2!UBERON:0003022;6.01e-08;2!UBERON:0002421;6.01e-08;2!UBERON:0002600;6.01e-08;2!UBERON:0001873;9.11e-08;2!UBERON:0002148;1.01e-07;2!UBERON:0006331;1.01e-07;2!UBERON:0009662;1.01e-07;2!UBERON:0001897;1.06e-07;2!UBERON:0010225;1.06e-07;2!UBERON:0001876;1.64e-07;2!UBERON:0001894;1.74e-07;7!UBERON:0003127;2.09e-07;2!UBERON:0002771;2.09e-07;2!UBERON:0010314;3.05e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.19e-86,56;UBERON:0005068,3.19e-86,56;UBERON:0006241,3.19e-86,56;UBERON:0007135,3.19e-86,56;UBERON:0000073,2.75e-78,53;UBERON:0002616,2.75e-78,53;UBERON:0001017,8.79e-69,81;UBERON:0000955,1.60e-68,68;UBERON:0006238,1.60e-68,68;UBERON:0002780,7.99e-67,41;UBERON:0001890,7.99e-67,41;UBERON:0003080,7.99e-67,41;UBERON:0006240,7.99e-67,41;UBERON:0007023,2.27e-62,114;UBERON:0003528,1.72e-61,34;UBERON:0002020,1.72e-61,34;UBERON:0001893,1.72e-61,34;UBERON:0001016,6.18e-61,89;UBERON:0003075,7.72e-59,82;UBERON:0007284,7.72e-59,82;UBERON:0001869,7.01e-56,32;UBERON:0002791,1.19e-55,32;UBERON:0002346,1.24e-55,86;UBERON:0002619,1.31e-46,22;UBERON:0003056,1.76e-45,61;UBERON:0010371,3.14e-44,104;UBERON:0000956,1.26e-40,25;UBERON:0000203,1.26e-40,25;UBERON:0001950,1.49e-40,20;UBERON:0010314,1.95e-36,132;UBERON:0004121,2.26e-31,171;UBERON:0000924,2.26e-31,171;UBERON:0006601,2.26e-31,171;UBERON:0011216,7.02e-28,223;UBERON:0000125,1.75e-22,9;UBERON:0002308,1.75e-22,9;UBERON:0002420,2.26e-22,9;UBERON:0007245,2.26e-22,9;UBERON:0010009,2.26e-22,9;UBERON:0010011,2.26e-22,9;UBERON:0000454,2.26e-22,9;UBERON:0000025,1.39e-21,192;UBERON:0004111,2.33e-20,240;UBERON:0002298,4.38e-20,6;UBERON:0003076,1.34e-19,15;UBERON:0003057,1.34e-19,15;UBERON:0000200,3.89e-19,6;UBERON:0000349,5.80e-17,5;UBERON:0009663,1.47e-16,7;UBERON:0001872,1.05e-15,5;UBERON:0000369,7.47e-14,4;UBERON:0002435,7.47e-14,4;UBERON:0000204,7.47e-14,4;UBERON:0010082,7.47e-14,4;UBERON:0004733,1.13e-12,12;UBERON:0002028,1.13e-12,12;UBERON:0007277,1.13e-12,12;UBERON:0000483,6.90e-12,306;UBERON:0000119,1.15e-11,309;UBERON:0004732,1.30e-11,13;UBERON:0001871,1.73e-11,6;UBERON:0001896,1.80e-11,3;UBERON:0005290,1.80e-11,3;UBERON:0010096,1.80e-11,3;UBERON:0001870,7.77e-11,3;UBERON:0005383,8.85e-11,3;UBERON:0005382,8.85e-11,3;UBERON:0000988,2.33e-10,3;UBERON:0002240,1.11e-09,3;UBERON:0005174,1.11e-09,3;UBERON:0001137,1.11e-09,3;UBERON:0002702,5.27e-08,2;UBERON:0001954,5.82e-08,2;UBERON:0003022,5.82e-08,2;UBERON:0002421,5.82e-08,2;UBERON:0002600,5.82e-08,2;UBERON:0001873,7.86e-08,2;UBERON:0010122,7.86e-08,2;UBERON:0002148,9.58e-08,2;UBERON:0006331,9.58e-08,2;UBERON:0009662,9.58e-08,2;UBERON:0001897,1.24e-07,2;UBERON:0010225,1.24e-07,2;UBERON:0001876,1.29e-07,2;UBERON:0003127,2.09e-07,2;UBERON:0000922,2.09e-07,592;UBERON:0002771,2.30e-07,2;UBERON:0001894,2.30e-07,7;UBERON:0006222,2.30e-07,7;UBERON:0002050,2.95e-07,564;UBERON:0000923,7.70e-07,560;UBERON:0010316,7.70e-07,560;UBERON:0005291,7.70e-07,560;UBERON:0006598,7.70e-07,560;UBERON:0010317,7.70e-07,560;UBERON:0002532,7.70e-07,560;UBERON:0000341,9.91e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,5.90811548924153,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,3.06134723934109,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,3.54296554325536,7.47697919477529,0,0.552896299656123,1.18219047581419,5.04586413454137,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.176915129006678,0,0,0,0,6.87491556402906,0,3.04543779442941,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0,0.693373365065693,0.347119476670262,0,0,2.97035336011451,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,3.10222900183806,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,4.80336230967832,0.821432273351958,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,4.77137813885582,9.94284864614502,0,0,0,0,0,4.73846541932592,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.226624183040251,0,0,6.20558190535443,3.43804764530994,0,0.704815022316672,0.533937062838473,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0,7.08854543973589,2.80660409274515,5.38321002037949,30.3906873715738,11.5366213598326,7.32737554708325,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0.345430341731199,0,4.00949464840019,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0.123935764259002,0,0,0,0,0,0,5.00987955752384,0,5.58718506700029,2.66651273512982,0,3.18123361335402,5.49017195148294,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0.163771917510097,0.147856086217045,3.24180406168294,3.12431239445539,7.02735108104026,4.6293541441552,1.09394961803644,0.548257766857182,1.48863353516788,0,0.383287282918786,0,0.672567444437648,0,1.13831095675649,0,0,0.857440047187092,1.97112225632812,1.84163765975977,0,3.22571065487001,2.8257513426185,3.92788974790005,0,0,0,0,2.35872595782966,0,0,0,0,0,0,0,1.29068207646083,0,0,2.54032230114557,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,2.58636007709779,0,0,0,0.150962843566674,0,0,0,0,0,1.57046773691956,2.97046400327086,2.113278637917,0,0,0,0,0,0,0.641930933513346,0,0.917458566809082,1.72007499781742,0,3.80752345069122,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,4.1458471972939,4.55105181792339,1.70587185520785,1.1903221573187,0,0,0,0,0.404234377916439,0,1.02669990325584,0,4.94883217209467,2.32862249582209,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0,0 | |||
|short_description=p1@NWD1 | |||
}} |
Revision as of 21:59, 20 January 2014
Short description: | p1@NWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NWD1_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_ENST00000420818, ENST00000518676, ENST00000524140, NM_001007525, uc002net.3, uc002neu.3_5end |
EntrezGene: | NWD1 |
HGNC: | 27619 |
UniProt: | C9J2Y8E5RJJ1Q149M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data