FFCP PHASE1:Hg19::chr19:15343191..15343270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23760 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H6B9 | |||
|association_with_transcript=0bp_to_ENST00000221730,NM_024794,uc002nap.2_5end | |||
|description=CAGE_peak_1_at_EPHX3_5end | |||
|id=chr19:15343191..15343270,- | |||
|ontology_enrichment_celltype=CL:0002368!5.71e-15!13;CL:0002202!2.05e-10!9;CL:0002632!2.05e-10!9;CL:0002076!6.20e-10!43;CL:0000066!1.02e-09!254;CL:0002322!5.93e-09!5;CL:0002159!1.82e-08!13;CL:0000244!4.83e-07!4;CL:0000731!4.83e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.70e-14;5!CL:0002368;1.04e-11;13!CL:0002202;4.71e-10;9!CL:0002632;4.71e-10;9!CL:0000239;4.17e-09;3!CL:1000615;4.17e-09;3!CL:0002306;4.17e-09;3!CL:0002681;4.77e-08;12!CL:0002584;4.77e-08;12!CL:0000575;5.41e-07;2!CL:0000039;7.47e-07;7!CL:0000586;7.47e-07;7!CL:1000507;7.59e-07;10!CL:1000494;7.59e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.80e-14,5;CL:0002368,1.13e-11,13;CL:0002202,4.59e-10,9;CL:0002632,4.59e-10,9;CL:0000239,4.12e-09,3;CL:1000615,4.12e-09,3;CL:0002306,4.12e-09,3;CL:0000066,1.35e-08,253;CL:0002681,4.93e-08,12;CL:0002584,4.93e-08,12;CL:0000575,5.42e-07,2;CL:0000039,7.65e-07,7;CL:0000586,7.65e-07,7;CL:1000507,7.74e-07,10;CL:1000494,7.74e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.05e-13!104;UBERON:0004119!1.70e-12!169;UBERON:0000925!1.70e-12!169;UBERON:0006595!1.70e-12!169;UBERON:0001004!4.12e-12!72;UBERON:0000065!1.20e-10!53;UBERON:0000466!3.90e-10!126;UBERON:0007196!7.21e-10!14;UBERON:0001558!7.21e-10!14;UBERON:0001008!9.19e-10!45;UBERON:0005181!5.49e-09!35;UBERON:0006554!5.87e-09!44;UBERON:0000077!1.87e-08!130;UBERON:0005178!3.28e-08!34;UBERON:0002224!3.28e-08!34;UBERON:0000365!4.80e-08!5;UBERON:0001007!5.72e-08!155;UBERON:0001555!5.72e-08!155;UBERON:0007026!5.72e-08!155;UBERON:0000922!9.43e-08!612;UBERON:0005177!1.52e-07!107;UBERON:0004921!3.67e-07!129;UBERON:0004185!3.67e-07!129;UBERON:0002553!4.44e-07!70;UBERON:0000072!8.31e-07!46;UBERON:0003064!9.08e-07!37;UBERON:0003887!9.10e-07!21;UBERON:0000468!9.70e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;3.31e-10;15!UBERON:0001558;3.31e-10;15!UBERON:0006853;4.17e-09;3!UBERON:0007685;4.17e-09;3!UBERON:0004134;4.17e-09;3!UBERON:0006554;6.22e-09;30!UBERON:0001008;6.22e-09;30!UBERON:0005178;3.65e-08;34!UBERON:0002224;3.65e-08;34!UBERON:0001225;4.77e-08;12!UBERON:0008987;4.77e-08;12!UBERON:0000922;1.10e-07;49!UBERON:0005181;1.40e-07;35!UBERON:0004211;7.59e-07;10!UBERON:0009773;7.59e-07;10!UBERON:0001231;7.59e-07;10!UBERON:0004810;7.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.27e-10,54;UBERON:0007196,3.18e-10,15;UBERON:0001558,3.18e-10,15;UBERON:0004119,1.18e-09,160;UBERON:0000925,1.18e-09,160;UBERON:0006595,1.18e-09,160;UBERON:0001004,1.63e-09,74;UBERON:0006853,4.12e-09,3;UBERON:0007685,4.12e-09,3;UBERON:0004134,4.12e-09,3;UBERON:0005178,5.55e-09,34;UBERON:0002224,5.55e-09,34;UBERON:0005181,1.19e-08,35;UBERON:0005177,2.33e-08,101;UBERON:0000072,2.65e-08,47;UBERON:0001225,4.93e-08,12;UBERON:0008987,4.93e-08,12;UBERON:0001008,8.23e-08,48;UBERON:0001007,2.71e-07,145;UBERON:0001555,2.71e-07,145;UBERON:0007026,2.71e-07,145;UBERON:0001042,5.18e-07,10;UBERON:0009145,5.18e-07,10;UBERON:0004921,5.75e-07,118;UBERON:0006554,7.39e-07,47;UBERON:0004810,7.74e-07,10;UBERON:0000922,9.00e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.91467873003018,18.1428303672831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,3.67768489791571,2.409647350226,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,9.83597278389864,9.26961106961073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89891279744945,3.27295344709002,0.573609190778008,5.3668430697022,4.77107165957347,6.04208502921496,4.25010325563019,8.32658807889574,4.74470566798579,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,3.07300799144152,3.37205259772859,0.502644862058154,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.460404944679482,0,0,0,7.21919380651859,4.54390488916047,0.784349769176855,0,0.422206515571503,0,0,0,0,0,0,10.1950509218015,9.14183609821597,1.56712328305525,0,0,0,0,0,0.412164046590889,0,0,3.44559322797703,5.85054221432869,0,0,0,0,0,0,0,0,0,1.15699440752685,0.192190067365106,0.638063562472921,4.046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,3.26672954583968,0.376575203107117,0.86101074534246,8.42357378338128,10.6423236848802,0.918893600827838,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.996239941255349,0.276283915531148,7.55798243562828,0,0,0,6.0211795268709,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0,4.06805840468426,0,0,0,0,0,0,0,0,0,0,0,0,15.159200925248,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,1.83309043480088,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,36.9528152820878,0,1.12990370390266,0,0,0,10.950877433149,0,1.49417096317547,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,18.8081183704072,20.2182971797934,18.6948152113133,2.4747128070665,7.7380195455795,0,0,1.02447419488958,2.7276385830199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9637107587668,1.28144895081234,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,5.17554178561945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0.682986574053893,0,0,0,0,0,0,0,1.02041020705668,0,0.840816489941367,0,0,0,0,0,0,0,0,0.62164849248911,0,2.07377898544228,0,0,0,0,0,0,0,0,0,5.9739783241312,0,0,0,12.6284858195376,0,0,0,0,0,0.150962843566674,0,0,2.35158648180761,0,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,2.84090487105608,0,7.64916223064863,5.07713070004565,17.4600309116205,5.76627340372463,0.151557396436479,0,0,0,16.4190166063755,0.476128862927481,2.19602293442421,1.80016671457988,0,0,0,42.8901993357014,15.7427318499229,31.7901690228853,9.89766434418934,3.32660356546013,0.407016343054873,0,0,0,0,0.977931553462932,5.69654649642034,2.66302709674205,1.00636896795513,0 | |||
|short_description=p1@EPHX3 | |||
}} |
Revision as of 21:51, 20 January 2014
Short description: | p1@EPHX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPHX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000221730, NM_024794, uc002nap.2_5end |
EntrezGene: | EPHX3 |
HGNC: | 23760 |
UniProt: | Q9H6B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.80e-14 | 5 |
respiratory epithelial cell | 1.13e-11 | 13 |
epithelial cell of tracheobronchial tree | 4.59e-10 | 9 |
epithelial cell of lower respiratory tract | 4.59e-10 | 9 |
brush border epithelial cell | 4.12e-09 | 3 |
kidney cortex tubule cell | 4.12e-09 | 3 |
epithelial cell of proximal tubule | 4.12e-09 | 3 |
epithelial cell | 1.35e-08 | 253 |
kidney cortical cell | 4.93e-08 | 12 |
renal cortical epithelial cell | 4.93e-08 | 12 |
corneal epithelial cell | 5.42e-07 | 2 |
germ line cell | 7.65e-07 | 7 |
germ cell | 7.65e-07 | 7 |
kidney tubule cell | 7.74e-07 | 10 |
nephron tubule epithelial cell | 7.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 2.27e-10 | 54 |
tracheobronchial tree | 3.18e-10 | 15 |
lower respiratory tract | 3.18e-10 | 15 |
endoderm-derived structure | 1.18e-09 | 160 |
endoderm | 1.18e-09 | 160 |
presumptive endoderm | 1.18e-09 | 160 |
respiratory system | 1.63e-09 | 74 |
renal cortex tubule | 4.12e-09 | 3 |
region of nephron tubule | 4.12e-09 | 3 |
proximal tubule | 4.12e-09 | 3 |
thoracic cavity element | 5.55e-09 | 34 |
thoracic cavity | 5.55e-09 | 34 |
thoracic segment organ | 1.19e-08 | 35 |
trunk region element | 2.33e-08 | 101 |
segment of respiratory tract | 2.65e-08 | 47 |
cortex of kidney | 4.93e-08 | 12 |
renal parenchyma | 4.93e-08 | 12 |
renal system | 8.23e-08 | 48 |
digestive system | 2.71e-07 | 145 |
digestive tract | 2.71e-07 | 145 |
primitive gut | 2.71e-07 | 145 |
chordate pharynx | 5.18e-07 | 10 |
pharyngeal region of foregut | 5.18e-07 | 10 |
subdivision of digestive tract | 5.75e-07 | 118 |
urinary system structure | 7.39e-07 | 47 |
nephron tubule epithelium | 7.74e-07 | 10 |
embryo | 9.00e-07 | 592 |