FFCP PHASE1:Hg19::chr19:13213555..13213568,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6734 | |||
|TSSclassifier=strong | |||
|UniProt=P12980 | |||
|association_with_transcript=112bp_to_ENST00000264824,uc002mwi.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_LYL1_5end | |||
|id=chr19:13213555..13213568,- | |||
|ontology_enrichment_celltype=CL:0000115!5.54e-23!35;CL:0002139!3.38e-19!24;CL:0002078!3.04e-16!44;CL:0000071!2.16e-15!18;CL:0002546!2.16e-15!18;CL:0000763!5.40e-15!112;CL:0000049!5.40e-15!112;CL:0000213!3.41e-12!57;CL:0000215!3.41e-12!57;CL:0002032!2.73e-10!165;CL:0000837!2.73e-10!165;CL:0000037!6.78e-10!172;CL:0000566!6.78e-10!172;CL:0000988!8.80e-10!182;CL:1000413!1.04e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.23e-39;24!CL:0000115;9.16e-37;36!CL:0000071;2.81e-36;18!CL:0002078;8.74e-21;45!CL:1000413;1.53e-19;9!CL:0000213;5.95e-16;58!CL:0000215;5.95e-16;58!CL:0002543;2.21e-13;6!CL:0002544;4.02e-13;6!CL:0000097;9.11e-13;5!CL:0002188;3.57e-11;5!CL:1000746;7.24e-08;7!CL:1000612;7.24e-08;7!CL:0002618;2.92e-07;3!CL:0000163;7.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.20e-44,36;CL:0002139,1.44e-39,24;CL:0000071,1.50e-36,18;CL:0002546,1.50e-36,18;CL:0002078,5.46e-34,45;CL:0000213,1.76e-24,58;CL:0000215,1.76e-24,58;CL:1000413,1.32e-19,9;CL:0002543,2.29e-13,6;CL:0000763,2.42e-13,108;CL:0000049,2.42e-13,108;CL:0002544,3.42e-13,6;CL:0000097,8.92e-13,5;CL:0002028,8.92e-13,5;CL:0002188,3.24e-11,5;CL:0000222,4.25e-10,121;CL:1000746,6.76e-08,7;CL:1000612,6.76e-08,7;CL:0000037,1.60e-07,168;CL:0002032,1.61e-07,161;CL:0000837,1.61e-07,161;CL:0002618,3.09e-07,3;CL:0000076,4.34e-07,63;CL:0000163,7.34e-07,9;CL:0002144,7.70e-07,3;CL:0000988,9.78e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002546;2.81e-36;18 | |||
|ontology_enrichment_disease=DOID:8692!5.80e-15!31;DOID:1240!1.25e-14!39;DOID:2531!6.29e-12!51;DOID:0060083!6.29e-12!51;DOID:1036!2.48e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.87e-28;31!DOID:1036;8.79e-19;8!DOID:1240;5.15e-18;39!DOID:2531;2.16e-12;51!DOID:0060083;2.16e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.61e-28,31;DOID:1240,1.89e-23,39;DOID:1036,1.18e-18,8;DOID:2531,1.90e-16,51;DOID:0060083,1.90e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0003081!3.03e-18!216;UBERON:0001986!2.16e-15!18;UBERON:0004638!2.16e-15!18;UBERON:0004852!2.16e-15!18;UBERON:0001009!2.65e-14!113;UBERON:0004535!5.99e-14!110;UBERON:0007023!1.04e-12!115;UBERON:0000487!2.72e-12!22;UBERON:0002193!4.13e-12!112;UBERON:0006914!7.52e-11!25;UBERON:0000055!9.98e-10!69;UBERON:0002390!1.53e-09!102;UBERON:0003061!1.53e-09!102;UBERON:0004872!3.78e-09!84;UBERON:0003915!1.04e-08!9;UBERON:0004700!1.04e-08!9;UBERON:0001917!1.04e-08!9;UBERON:0000178!2.50e-08!15;UBERON:0000179!2.50e-08!15;UBERON:0000463!2.50e-08!15;UBERON:0001981!4.53e-08!60;UBERON:0007500!4.53e-08!60;UBERON:0004537!4.53e-08!60;UBERON:0006965!4.53e-08!60;UBERON:0003914!7.05e-08!118;UBERON:0002049!2.23e-07!79;UBERON:0007798!2.23e-07!79;UBERON:0002405!3.08e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.81e-36;18!UBERON:0001986;2.81e-36;18!UBERON:0004852;2.81e-36;18!UBERON:0000487;9.56e-29;22!UBERON:0006914;1.10e-24;25!UBERON:0003915;1.53e-19;9!UBERON:0004700;1.53e-19;9!UBERON:0001917;1.53e-19;9!UBERON:0000490;3.47e-16;33!UBERON:0000178;1.86e-12;15!UBERON:0000179;1.86e-12;15!UBERON:0000463;1.86e-12;15!UBERON:0000055;5.75e-09;65!UBERON:0007500;9.36e-09;56!UBERON:0001981;9.36e-09;56!UBERON:0004537;9.36e-09;56!UBERON:0001638;1.17e-08;9!UBERON:0003920;1.17e-08;9!UBERON:0004582;1.17e-08;9!UBERON:0002390;5.19e-08;32!UBERON:0000074;7.24e-08;7!UBERON:0001229;7.24e-08;7!UBERON:0003914;4.52e-07;74!UBERON:0002193;5.60e-07;42!UBERON:0004535;5.77e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.50e-36,18;UBERON:0001986,1.50e-36,18;UBERON:0004852,1.50e-36,18;UBERON:0000487,5.79e-29,22;UBERON:0006914,7.09e-25,25;UBERON:0003915,1.32e-19,9;UBERON:0004700,1.32e-19,9;UBERON:0001917,1.32e-19,9;UBERON:0004535,1.41e-18,109;UBERON:0001009,8.32e-18,112;UBERON:0000055,5.29e-15,68;UBERON:0003081,8.43e-15,203;UBERON:0007500,1.59e-12,59;UBERON:0001981,1.59e-12,59;UBERON:0004537,1.59e-12,59;UBERON:0006965,1.59e-12,59;UBERON:0000178,1.74e-12,15;UBERON:0000179,1.74e-12,15;UBERON:0000463,1.74e-12,15;UBERON:0002049,3.34e-12,78;UBERON:0007798,3.34e-12,78;UBERON:0004872,5.14e-10,83;UBERON:0003914,4.62e-09,117;UBERON:0001638,1.20e-08,9;UBERON:0003920,1.20e-08,9;UBERON:0004582,1.20e-08,9;UBERON:0010532,6.76e-08,7;UBERON:0000074,6.76e-08,7;UBERON:0001229,6.76e-08,7;UBERON:0001230,6.76e-08,7;UBERON:0003220,6.76e-08,7;UBERON:0005749,6.76e-08,7;UBERON:0004199,6.76e-08,7;UBERON:0004209,6.76e-08,7;UBERON:0004198,6.76e-08,7;UBERON:0005103,7.39e-07,8;UBERON:0000083,7.39e-07,8;UBERON:0009201,7.39e-07,8;UBERON:0006553,7.39e-07,8;UBERON:0003074,7.39e-07,8;UBERON:0003060,7.39e-07,8;UBERON:0010523,7.70e-07,3;UBERON:0001915,7.70e-07,3;UBERON:0001982,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.18009283054671,0.383829398097213,0.309632246632152,0,0,0,0.154934401160603,0,5.28480790802725,0.553995408531877,0,0,0.895661896959697,0,0.77272670290256,0.726991193897824,0,0.970336244751265,0,0,0.619412741790207,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0,0.316462387440884,0.422510572623884,0.637812899895131,0,0.561643155732475,0.150176892841506,0.48217676009124,1.14005097496499,0.19891667719909,0.91332076882317,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0,3.96513985737078,8.40762844472304,12.1156678996535,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0,0,0,1.98762407366705,9.46258054616737,5.20710752411391,1.13061588384802,10.4874859052476,7.70330517432189,7.73281376186199,1.8089173141853,2.13459757612026,2.67776490211736,1.61131726843659,1.52054421143703,1.70843440283719,2.94130464276695,7.29127753093584,2.50039239195423,2.46982309888787,3.49095589498299,13.7984973719295,2.84779697870439,5.1296488300514,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0.453728732640084,0,0,0,0,0.103052529238439,0,0,0,0,0.757301322732344,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,5.16708818237254,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.866198686566443,0.462985512576611,1.52203321787679,0,0,0.984868024349589,0.234004265139238,0.445893486866185,0,0,0.141775097242386,0,0,0,3.4486426652716,15.584572820341,12.8543431635279,14.988475155364,18.936365013957,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,5.68666920354483,3.91215522135986,3.02282282542995,4.62681758070868,0,0,0,0,0,14.2518919819857,19.0847879248177,0,0.328014645699706,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0,0,1.56989728039846,0,0.54907405947211,0,0.202182481573316,1.58510321173008,0,0,0.243713489631284,0,0.409499734223957,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,26.894723289305,35.9379487356916,45.571774973933,5.47933083552915,2.87953591160336,23.3450392029378,27.0015718619057,46.794385401362,0,0,0,0.185803175125719,0.144269212976445,0,0.478278818186467,6.78569862871576,5.745161103971,5.92686031626872,1.29848776109822,5.05434920604226,0,0.94007937463814,0,6.94096288986573,0.321176150207399,0.201799707191048,0,2.74804275804612,0,1.3420566473545,0.333698283423817,0.19538809540204,4.45449878232388,2.46174797895425,12.9818725668472,3.3307196799782,9.86909035614947,0,0.146508179271894,0,0.66866030566487,0,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0.295930216910801,16.7638164642858,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.615602068030377,0.113942055847001,0,0,0,0.31900115973192,0,0,1.02193298195737,6.90713128138109,15.2914747348144,12.4077613339449,13.528314867924,12.2509758492365,7.77990304169159,13.0327994763911,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.313265848516366,0.134802265961354,0.802577647298789,0,0.182454789215666,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0.0882561266915003,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.410716136675979,1.27746588066972,0,0,0,0.458320848023367,0,0.399358000997982,0,0.446342914883745,0.335917362433631,0,0,0.0787831823072236,0,0,0.393709926058995,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.629455057619977,0,0,0,0,0.662091970365432,0,0,0,0,0,15.9259490253718,0,0,0.146552233678082,7.95041333473328,0,0.13223260174269,0,0,0.320362237703084,1.25763444079733,2.89967338743037,0.992332043623902,0,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0,0,0,0.4437162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| |||
|short_description=p5@LYL1 | |||
}} |
Revision as of 21:38, 20 January 2014
Short description: | p5@LYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LYL1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 112bp_to_ENST00000264824, uc002mwi.2_5end |
EntrezGene: | LYL1 |
HGNC: | 6734 |
UniProt: | P12980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.20e-44 | 36 |
endothelial cell of vascular tree | 1.44e-39 | 24 |
blood vessel endothelial cell | 1.50e-36 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-36 | 18 |
meso-epithelial cell | 5.46e-34 | 45 |
lining cell | 1.76e-24 | 58 |
barrier cell | 1.76e-24 | 58 |
endothelial cell of artery | 1.32e-19 | 9 |
vein endothelial cell | 2.29e-13 | 6 |
myeloid cell | 2.42e-13 | 108 |
common myeloid progenitor | 2.42e-13 | 108 |
aortic endothelial cell | 3.42e-13 | 6 |
mast cell | 8.92e-13 | 5 |
basophil mast progenitor cell | 8.92e-13 | 5 |
glomerular endothelial cell | 3.24e-11 | 5 |
mesodermal cell | 4.25e-10 | 121 |
glomerular cell | 6.76e-08 | 7 |
kidney corpuscule cell | 6.76e-08 | 7 |
hematopoietic stem cell | 1.60e-07 | 168 |
hematopoietic oligopotent progenitor cell | 1.61e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-07 | 161 |
endothelial cell of umbilical vein | 3.09e-07 | 3 |
squamous epithelial cell | 4.34e-07 | 63 |
endocrine cell | 7.34e-07 | 9 |
capillary endothelial cell | 7.70e-07 | 3 |
hematopoietic cell | 9.78e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.61e-28 | 31 |
leukemia | 1.89e-23 | 39 |
chronic leukemia | 1.18e-18 | 8 |
hematologic cancer | 1.90e-16 | 51 |
immune system cancer | 1.90e-16 | 51 |