FFCP PHASE1:Hg19::chr18:40857296..40857305,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6860 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |||
|association_with_transcript=35bp_to_ENST00000442661_5end | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_8_at_SYT4_5end | |||
|id=chr18:40857296..40857305,- | |||
|ontology_enrichment_celltype=CL:0000047!2.98e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.91e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-18;82!UBERON:0006215;1.99e-13;3 | |||
|ontology_enrichment_disease=DOID:171!2.86e-10!10;DOID:169!2.55e-09!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.92e-79!57;UBERON:0005068!2.92e-79!57;UBERON:0006241!2.92e-79!57;UBERON:0007135!2.92e-79!57;UBERON:0000073!1.61e-76!94;UBERON:0001016!1.61e-76!94;UBERON:0001017!1.44e-75!82;UBERON:0005743!4.21e-74!86;UBERON:0002616!2.43e-66!59;UBERON:0002780!6.57e-61!41;UBERON:0001890!6.57e-61!41;UBERON:0006240!6.57e-61!41;UBERON:0000955!4.42e-60!69;UBERON:0006238!4.42e-60!69;UBERON:0003080!3.07e-59!42;UBERON:0002346!4.16e-57!90;UBERON:0003075!2.93e-55!86;UBERON:0007284!2.93e-55!86;UBERON:0002020!6.35e-47!34;UBERON:0003528!6.35e-47!34;UBERON:0001869!8.24e-47!32;UBERON:0001893!8.38e-47!34;UBERON:0002791!1.06e-44!33;UBERON:0001950!1.74e-42!20;UBERON:0002619!4.72e-42!22;UBERON:0007023!1.62e-41!115;UBERON:0000924!9.67e-41!173;UBERON:0006601!9.67e-41!173;UBERON:0003056!4.37e-40!61;UBERON:0004121!7.32e-39!169;UBERON:0000956!1.88e-36!25;UBERON:0000203!1.88e-36!25;UBERON:0000033!2.21e-31!123;UBERON:0000153!2.56e-29!129;UBERON:0007811!2.56e-29!129;UBERON:0003076!4.25e-20!15;UBERON:0003057!4.25e-20!15;UBERON:0000025!4.28e-18!194;UBERON:0001894!1.24e-15!7;UBERON:0006222!1.24e-15!7;UBERON:0004733!6.51e-15!12;UBERON:0002028!6.51e-15!12;UBERON:0007277!6.51e-15!12;UBERON:0000200!8.85e-15!6;UBERON:0001871!6.42e-14!7;UBERON:0004732!1.30e-13!13;UBERON:0004111!2.05e-13!241;UBERON:0002021!1.42e-12!5;UBERON:0001872!1.64e-12!5;UBERON:0002420!7.20e-12!9;UBERON:0007245!7.20e-12!9;UBERON:0010009!7.20e-12!9;UBERON:0010011!7.20e-12!9;UBERON:0000454!7.20e-12!9;UBERON:0002308!9.00e-12!9;UBERON:0000125!9.00e-12!9;UBERON:0000483!1.25e-10!309;UBERON:0000119!2.15e-10!312;UBERON:0003296!3.06e-10!4;UBERON:0010133!3.06e-10!4;UBERON:0000477!6.55e-10!286;UBERON:0002298!7.75e-10!8;UBERON:0002680!1.33e-09!9;UBERON:0001895!1.33e-09!9;UBERON:0010092!1.33e-09!9;UBERON:0000064!1.12e-08!219;UBERON:0002771!3.22e-08!3;UBERON:0009663!3.45e-08!7;UBERON:0000349!1.21e-07!5;UBERON:0000988!1.23e-07!3;UBERON:0000475!2.03e-07!365;UBERON:0001896!2.12e-07!3;UBERON:0005290!2.12e-07!3;UBERON:0010096!2.12e-07!3;UBERON:0000013!2.17e-07!5;UBERON:0002410!2.17e-07!5;UBERON:0002240!5.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.54e-61;20!UBERON:0002619;9.09e-56;22!UBERON:0001869;5.68e-49;32!UBERON:0000956;8.92e-49;25!UBERON:0000203;8.92e-49;25!UBERON:0003528;9.68e-49;34!UBERON:0002020;9.68e-49;34!UBERON:0001893;5.64e-46;34!UBERON:0002791;4.36e-45;32!UBERON:0000073;3.02e-41;53!UBERON:0002616;3.02e-41;53!UBERON:0002780;5.47e-40;41!UBERON:0001890;5.47e-40;41!UBERON:0000955;5.73e-31;68!UBERON:0001017;1.57e-27;75!UBERON:0001016;9.40e-25;83!UBERON:0000200;9.03e-23;6!UBERON:0002021;2.64e-19;5!UBERON:0001872;3.87e-19;5!UBERON:0003296;1.57e-15;4!UBERON:0010133;1.57e-15;4!UBERON:0002680;2.32e-15;9!UBERON:0001895;2.32e-15;9!UBERON:0004733;4.22e-15;12!UBERON:0002028;4.22e-15;12!UBERON:0004732;7.33e-14;13!UBERON:0001871;4.81e-13;6!UBERON:0001870;6.51e-13;3!UBERON:0000988;1.01e-11;3!UBERON:0007023;2.21e-10;114!UBERON:0000125;2.73e-10;9!UBERON:0002308;2.73e-10;9!UBERON:0002298;5.12e-10;6!UBERON:0011216;2.36e-09;132!UBERON:0000369;2.68e-09;4!UBERON:0002435;2.68e-09;4!UBERON:0000204;2.68e-09;4!UBERON:0002702;3.86e-09;2!UBERON:0001894;6.55e-09;7!UBERON:0001905;9.01e-09;2!UBERON:0002757;9.01e-09;2!UBERON:0010134;9.01e-09;2!UBERON:0005408;9.01e-09;2!UBERON:0001899;9.01e-09;2!UBERON:0002771;1.30e-08;2!UBERON:0000007;1.84e-08;2!UBERON:0002148;3.37e-08;2!UBERON:0006331;3.37e-08;2!UBERON:0009662;3.37e-08;2!UBERON:0002420;6.41e-07;9!UBERON:0007245;6.41e-07;9!UBERON:0010009;6.41e-07;9!UBERON:0010011;6.41e-07;9!UBERON:0000454;6.41e-07;9!UBERON:0002037;6.81e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.73e-74,53;UBERON:0002616,1.73e-74,53;UBERON:0001049,2.17e-74,56;UBERON:0005068,2.17e-74,56;UBERON:0006241,2.17e-74,56;UBERON:0007135,2.17e-74,56;UBERON:0001017,9.64e-73,81;UBERON:0001016,1.86e-71,89;UBERON:0000955,3.27e-63,68;UBERON:0006238,3.27e-63,68;UBERON:0001950,1.06e-61,20;UBERON:0002780,3.59e-60,41;UBERON:0001890,3.59e-60,41;UBERON:0003080,3.59e-60,41;UBERON:0006240,3.59e-60,41;UBERON:0003528,5.47e-57,34;UBERON:0002020,5.47e-57,34;UBERON:0001869,3.89e-56,32;UBERON:0002619,6.50e-56,22;UBERON:0001893,1.37e-52,34;UBERON:0002791,3.83e-51,32;UBERON:0000956,6.64e-49,25;UBERON:0000203,6.64e-49,25;UBERON:0002346,7.07e-49,86;UBERON:0003075,1.94e-48,82;UBERON:0007284,1.94e-48,82;UBERON:0003056,1.51e-38,61;UBERON:0010371,1.61e-36,104;UBERON:0004121,3.84e-35,171;UBERON:0000924,3.84e-35,171;UBERON:0006601,3.84e-35,171;UBERON:0007023,8.30e-31,114;UBERON:0011216,2.98e-29,223;UBERON:0010314,6.40e-29,132;UBERON:0000200,6.93e-23,6;UBERON:0002021,2.55e-19,5;UBERON:0001872,3.21e-19,5;UBERON:0000025,9.77e-19,192;UBERON:0003296,1.48e-15,4;UBERON:0010133,1.48e-15,4;UBERON:0002680,4.00e-15,9;UBERON:0001895,4.00e-15,9;UBERON:0010092,4.00e-15,9;UBERON:0003076,4.60e-15,15;UBERON:0003057,4.60e-15,15;UBERON:0004733,6.19e-15,12;UBERON:0002028,6.19e-15,12;UBERON:0007277,6.19e-15,12;UBERON:0004732,1.04e-13,13;UBERON:0004111,2.73e-13,240;UBERON:0001871,4.57e-13,6;UBERON:0001870,6.27e-13,3;UBERON:0000988,2.30e-11,3;UBERON:0000125,3.63e-10,9;UBERON:0002308,3.63e-10,9;UBERON:0002298,7.93e-10,6;UBERON:0000483,1.99e-09,306;UBERON:0000369,2.39e-09,4;UBERON:0002435,2.39e-09,4;UBERON:0000204,2.39e-09,4;UBERON:0010082,2.39e-09,4;UBERON:0000119,2.97e-09,309;UBERON:0002702,4.02e-09,2;UBERON:0001894,6.36e-09,7;UBERON:0006222,6.36e-09,7;UBERON:0001905,7.57e-09,2;UBERON:0002757,7.57e-09,2;UBERON:0010134,7.57e-09,2;UBERON:0005408,7.57e-09,2;UBERON:0001899,7.57e-09,2;UBERON:0002771,1.16e-08,2;UBERON:0000007,2.06e-08,2;UBERON:0002148,6.56e-08,2;UBERON:0006331,6.56e-08,2;UBERON:0009662,6.56e-08,2;UBERON:0002420,5.12e-07,9;UBERON:0007245,5.12e-07,9;UBERON:0010009,5.12e-07,9;UBERON:0010011,5.12e-07,9;UBERON:0000454,5.12e-07,9;UBERON:0002037,6.75e-07,6;UBERON:0006215,6.75e-07,6;UBERON:0000923,7.88e-07,560;UBERON:0010316,7.88e-07,560;UBERON:0005291,7.88e-07,560;UBERON:0006598,7.88e-07,560;UBERON:0010317,7.88e-07,560;UBERON:0002532,7.88e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,1.54657762555539,4.18790663335872,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,9.06957892275394,0,0,0,0,0,0,0.0986434056369336,0,0,0,4.36010061360701,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0.583209226766509,0.347249989866585,0,2.89431452700979,19.8356257212208,13.269511191747,5.91095237907095,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,1.22429104652196,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,4.49506651286739,0,0,0,0,0,0,12.5264348439234,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0,0,3.82722206945555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.53876168215693,3.1297732676625,0.573409195690071,0.998361463831671,1.55241007353459,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27894371303652,0.431299245586727,0.629063767423586,1.31051565830417,0,0.212574920101683,3.34626563499306,0,0,0,16.0114149657094,0,0,2.82608590424422,4.25089728976755,1.27707087245721,2.2562800066483,6.80593579798639,1.9364030689981,1.77623210195036,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.29627787702542,3.12431239445539,2.06686796501184,2.98054307911362,2.7348740450911,0,0,0,0,1.60710550763486,5.71682327772001,1.21393120847326,2.95960848756687,0,0,0,2.10706172228178,1.77586488619693,0,0,0.078493092850514,2.35673384874003,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.109940516745429,9.81258483183378,0,0,1.41095188908457,0,1.41405928260976,1.17785080268967,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,1.22384682343646,1.74540276136151,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p8@SYT4 | |||
}} |
Revision as of 19:10, 20 January 2014
Short description: | p8@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | 35bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.91e-08 | 8 |