FFCP PHASE1:Hg19::chr15:58724170..58724183,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6619 | |||
|TSSclassifier=strong | |||
|UniProt=A6H8L5,P11150 | |||
|association_with_transcript=0bp_to_NM_000236,uc002afa.1_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_3_at_LIPC_5end | |||
|id=chr15:58724170..58724183,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.68e-28!12;CL:0000417!2.68e-28!12;CL:0000668!2.68e-28!12;CL:0000414!2.68e-28!12;CL:0000412!2.68e-28!12;CL:0000182!2.68e-28!12;CL:0000223!6.15e-13!59;CL:1000507!1.03e-10!12;CL:1000494!1.03e-10!12;CL:1000449!5.62e-08!16;CL:1000497!4.62e-07!18;CL:0002518!4.62e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.07e-43;12!CL:0002563;2.08e-09;4!CL:1000507;7.35e-08;10!CL:1000494;7.35e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.17e-43,12;CL:0000223,9.52e-19,58;CL:0002563,2.08e-09,4;CL:1000507,7.53e-08,10;CL:1000494,7.53e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.97e-37;11!UBERON:0009497;5.09e-31;13!UBERON:0003104;3.23e-25;31!UBERON:0001041;4.87e-13;30!CL:0000223;6.03e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.31e-34!55;UBERON:0005173!1.31e-34!55;UBERON:0008835!1.92e-33!22;UBERON:0003894!1.92e-33!22;UBERON:0002107!4.53e-33!19;UBERON:0006925!4.53e-33!19;UBERON:0008836!4.53e-33!19;UBERON:0009854!7.00e-32!23;UBERON:0002417!9.16e-31!61;UBERON:0000916!9.16e-31!61;UBERON:0007499!3.92e-29!25;UBERON:0009497!3.92e-29!25;UBERON:0000015!3.92e-29!25;UBERON:0002423!3.92e-29!25;UBERON:0006235!3.92e-29!25;UBERON:0004161!3.92e-29!25;UBERON:0009856!6.44e-28!26;UBERON:0005057!7.10e-28!26;UBERON:0003929!1.35e-19!54;UBERON:0002365!2.03e-19!31;UBERON:0002330!2.03e-19!31;UBERON:0005177!2.01e-17!107;UBERON:0002368!5.98e-17!35;UBERON:0000949!3.97e-15!45;UBERON:0009569!1.47e-14!113;UBERON:0002530!5.23e-13!59;UBERON:0000466!1.63e-12!126;UBERON:0005911!8.62e-12!82;UBERON:0002113!2.98e-11!27;UBERON:0003918!2.98e-11!27;UBERON:0005095!2.98e-11!27;UBERON:0007687!2.98e-11!27;UBERON:0003887!3.37e-11!21;UBERON:0004921!8.40e-11!129;UBERON:0004185!8.40e-11!129;UBERON:0009773!1.03e-10!12;UBERON:0001231!1.03e-10!12;UBERON:0004810!1.03e-10!12;UBERON:0000080!6.77e-10!18;UBERON:0002120!6.77e-10!18;UBERON:0004875!6.77e-10!18;UBERON:0005721!6.77e-10!18;UBERON:0005754!6.77e-10!18;UBERON:0007297!6.77e-10!18;UBERON:0003104!1.32e-09!238;UBERON:0009142!1.32e-09!238;UBERON:0000077!1.79e-09!130;UBERON:0003914!1.80e-09!118;UBERON:0005256!2.14e-09!143;UBERON:0000489!2.63e-09!32;UBERON:0001041!3.62e-09!98;UBERON:0000058!6.69e-09!26;UBERON:0004876!7.53e-09!20;UBERON:0001007!2.52e-08!155;UBERON:0001555!2.52e-08!155;UBERON:0007026!2.52e-08!155;UBERON:0006554!3.21e-08!44;UBERON:0002100!4.34e-08!216;UBERON:0001008!5.28e-08!45;UBERON:0004211!5.62e-08!16;UBERON:0001285!5.62e-08!16;UBERON:0007684!5.62e-08!16;UBERON:0003220!5.62e-08!16;UBERON:0004208!5.62e-08!16;UBERON:0006555!1.71e-07!17;UBERON:0005103!1.71e-07!17;UBERON:0000083!1.71e-07!17;UBERON:0009201!1.71e-07!17;UBERON:0004819!1.71e-07!17;UBERON:0006553!1.71e-07!17;UBERON:0003074!1.71e-07!17;UBERON:0003060!1.71e-07!17;UBERON:0004119!2.59e-07!169;UBERON:0000925!2.59e-07!169;UBERON:0006595!2.59e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.56e-43;19!UBERON:0006925;6.56e-43;19!UBERON:0002423;2.93e-32;25!UBERON:0002365;4.16e-25;31!UBERON:0002330;4.16e-25;31!UBERON:0005172;5.02e-23;52!UBERON:0005173;5.02e-23;52!UBERON:0002368;7.87e-22;33!UBERON:0002417;2.92e-15;58!UBERON:0000916;2.92e-15;58!UBERON:0000949;1.16e-13;43!UBERON:0002530;1.87e-09;57!UBERON:0001242;2.08e-09;4!UBERON:0001262;2.08e-09;4!UBERON:0004786;2.08e-09;4!UBERON:0004808;2.08e-09;4!UBERON:0001277;2.08e-09;4!UBERON:0001007;2.03e-08;81!UBERON:0002113;2.46e-08;24!UBERON:0011143;2.46e-08;24!UBERON:0004211;7.35e-08;10!UBERON:0009773;7.35e-08;10!UBERON:0001231;7.35e-08;10!UBERON:0004810;7.35e-08;10!UBERON:0009569;3.90e-07;110!UBERON:0000489;7.22e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.02e-43,19;UBERON:0006925,7.02e-43,19;UBERON:0008836,7.02e-43,19;UBERON:0008835,7.79e-37,22;UBERON:0003894,7.79e-37,22;UBERON:0009854,3.60e-35,23;UBERON:0007499,3.08e-32,25;UBERON:0009497,3.08e-32,25;UBERON:0000015,3.08e-32,25;UBERON:0002423,3.08e-32,25;UBERON:0006235,3.08e-32,25;UBERON:0004161,3.08e-32,25;UBERON:0005172,4.46e-32,54;UBERON:0005173,4.46e-32,54;UBERON:0009856,6.10e-31,26;UBERON:0002417,1.30e-28,60;UBERON:0000916,1.30e-28,60;UBERON:0002365,1.04e-25,31;UBERON:0002330,1.04e-25,31;UBERON:0003929,3.44e-24,54;UBERON:0002368,1.35e-22,35;UBERON:0000949,3.12e-17,45;UBERON:0005177,6.10e-16,101;UBERON:0002530,1.54e-15,59;UBERON:0005911,3.65e-15,82;UBERON:0009569,4.08e-14,112;UBERON:0003104,4.23e-12,160;UBERON:0009142,4.23e-12,160;UBERON:0004921,2.06e-11,118;UBERON:0001041,6.73e-10,87;UBERON:0003914,7.87e-10,117;UBERON:0001242,2.08e-09,4;UBERON:0001262,2.08e-09,4;UBERON:0004786,2.08e-09,4;UBERON:0004808,2.08e-09,4;UBERON:0001277,2.08e-09,4;UBERON:0001007,7.61e-09,145;UBERON:0001555,7.61e-09,145;UBERON:0007026,7.61e-09,145;UBERON:0002100,6.42e-08,199;UBERON:0005256,6.54e-08,122;UBERON:0004810,7.53e-08,10;UBERON:0004119,8.63e-08,160;UBERON:0000925,8.63e-08,160;UBERON:0006595,8.63e-08,160;UBERON:0002113,1.07e-07,26;UBERON:0003918,1.07e-07,26;UBERON:0011143,1.07e-07,26;UBERON:0005095,1.07e-07,26;UBERON:0007687,1.07e-07,26;UBERON:0000490,2.17e-07,148 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,15.2106041786197,31.450470933684,12.4065880403095,0,20.6620576752431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.382274501403,0,0,0,0,0,0,0.15403067420883,1.56869953835371,0,0.316654886678627,0,0,0,0,0,2.00675909541941,0,0,1.34324852833307,0,0,0,0,0,14.837905677272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2868775343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,5.59360594381288,5.10978321963232,5.66189768375153,13.6814199305501,0,0,0,0,0,0,0,0,0,0,1.89133697518076,2.7800931711549,0,0,0,0,0,0,0,0,0,0,0,0,0,37.5173718215891,39.7520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LIPC | |||
}} |
Revision as of 23:49, 11 January 2014
Short description: | p3@LIPC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIPC_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 0bp_to_NM_000236, uc002afa.1_5end |
EntrezGene: | LIPC |
HGNC: | 6619 |
UniProt: | A6H8L5P11150 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.17e-43 | 12 |
endodermal cell | 9.52e-19 | 58 |
intestinal epithelial cell | 2.08e-09 | 4 |
kidney tubule cell | 7.53e-08 | 10 |
nephron tubule epithelial cell | 7.53e-08 | 10 |