FFCP PHASE1:Hg19::chr13:111077143..111077162,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:111077143..111077162,+ | |||
|id=chr13:111077143..111077162,+ | |||
|ontology_enrichment_celltype=CL:0000222!9.34e-11!119;CL:0000213!4.03e-08!57;CL:0000215!4.03e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.61e-14;13!CL:1000449;8.97e-08;15!CL:0002681;1.20e-07;12!CL:0002584;1.20e-07;12!CL:0000115;1.21e-07;36!CL:1000746;1.68e-07;7!CL:1000612;1.68e-07;7!CL:0002188;3.16e-07;5!CL:0002615;6.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.42e-12,15;CL:0000115,1.17e-08,36;CL:0002078,2.36e-08,45;CL:1000449,9.04e-08,15;CL:0002681,1.29e-07,12;CL:0002584,1.29e-07,12;CL:0000213,1.49e-07,58;CL:0000215,1.49e-07,58;CL:1000746,2.54e-07,7;CL:1000612,2.54e-07,7;CL:0002188,6.03e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.88e-13!118;UBERON:0002049!1.07e-12!79;UBERON:0007798!1.07e-12!79;UBERON:0001009!4.00e-11!113;UBERON:0004535!6.97e-11!110;UBERON:0000055!1.38e-10!69;UBERON:0004872!9.62e-10!84;UBERON:0001981!1.58e-08!60;UBERON:0007500!1.58e-08!60;UBERON:0004537!1.58e-08!60;UBERON:0006965!1.58e-08!60;UBERON:0005256!1.78e-07!143;UBERON:0000353!4.97e-07!17;UBERON:0002417!9.71e-07!61;UBERON:0000916!9.71e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;4.15e-10;15!UBERON:0006555;8.97e-08;15!UBERON:0004819;8.97e-08;15!UBERON:0001285;8.97e-08;15!UBERON:0007684;8.97e-08;15!UBERON:0001225;1.20e-07;12!UBERON:0008987;1.20e-07;12!UBERON:0000074;1.68e-07;7!UBERON:0001229;1.68e-07;7!UBERON:0000478;3.85e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,4.48e-10,15;UBERON:0003914,1.09e-08,117;UBERON:0004211,9.04e-08,15;UBERON:0009773,9.04e-08,15;UBERON:0001231,9.04e-08,15;UBERON:0001285,9.04e-08,15;UBERON:0007684,9.04e-08,15;UBERON:0004208,9.04e-08,15;UBERON:0001225,1.29e-07,12;UBERON:0008987,1.29e-07,12;UBERON:0010532,2.54e-07,7;UBERON:0000074,2.54e-07,7;UBERON:0001229,2.54e-07,7;UBERON:0001230,2.54e-07,7;UBERON:0003220,2.54e-07,7;UBERON:0005749,2.54e-07,7;UBERON:0004199,2.54e-07,7;UBERON:0004209,2.54e-07,7;UBERON:0004198,2.54e-07,7;UBERON:0000478,3.00e-07,24;UBERON:0006555,3.42e-07,16;UBERON:0004819,3.42e-07,16 | |||
|phase1_expression=1.81678379270557,5.99481466894753,2.39622486963151,1.0007329835313,1.34088328328186,0,0,0,2.87304191019822,0.491467873003018,2.79120467188971,0.436882744260345,0,0.123766352960047,0.331397375727916,3.36162573225888,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.612002073732759,0.313454721478088,0,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,1.0843174571537,0,0.579386075843295,0,0,0,0.443458794925128,0.527008714158756,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0.258416759169329,0.71153252537342,3.01248551488203,2.01414658554573,0.760272105718513,3.1728067481262,0,4.0507097394088,0.535798369704479,0.44905874525234,0.225222960966644,0,1.89853131913626,1.09921046358244,0,0,0,2.98183171017191,0.759783069987479,0.794455084879313,0.860509862246441,1.06400514659507,0,1.06748995729705,3.7000132262574,0,1.0776853765575,0.817309515567294,2.57307626996383,2.88087962239999,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0.718618141816238,0,0.375355559615893,0,0,0.612975591598039,0.600952235626387,0.453728732640084,0.717558542755448,0.213557388818567,0.635795703478686,0.900273288253207,0.309157587715317,0.257640540045629,0.744467425326359,1.35021065793013,0.779496041289589,0,0.0920498986422993,0.484938170456436,0,0.403008392910561,0.508681776931463,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0,0,3.69077727312324,4.20725321410337,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0.70445216541493,1.58803092537181,0.925971025153221,2.28304982681518,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0.285826432630578,0.672786506072164,0.87192013766656,0.36669142910475,1.80980402060889,0,0.845302752556,4.78688609852767,1.04007436911366,0,1.41849132023278,0,1.28680194292333,1.62786481617433,0,1.30294473717494,0.355391948742546,0,1.80863626235752,0.871533458600294,1.89948683245908,0,0,0,2.63587341040741,3.44585807502342,0,0.144781306667579,0.205476322550383,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,1.45579603071565,0.713715955188647,1.10391690523754,0.468565659970853,0,15.9185252839189,0,0.664225598535437,0,0.347534457872331,4.11182430671755,3.77457766191941,0,0,0,0,0,0,0.496215615637554,1.84154367945675,1.12264037773229,0.640695746278505,0.511707249066704,1.28683136914886,1.48418066444991,0,0,0,0,0,0,1.60405176242628,0.0920809889358963,0.229628896329213,1.45672934405374,0.393373244878272,1.80479845162965,0.462092022626489,0,2.92278449306521,0.316654886678627,1.13733384070897,1.02056223165909,0.863663664408557,4.62681758070868,0.541892875087706,1.50506932156456,0.254876273045038,0,1.34324852833307,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0.460511024178389,0,0.107420244868274,0.580066775656914,0.0852266274161009,0.0890320356467374,0.165284915360978,0.960950336825531,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,1.86062352764589,0.372158369359667,0.632758849437452,0.953150969619124,0,0,0,1.56989728039846,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,0,0.608731130888112,0,0.281695602532241,0.143411352204052,0.491245205065606,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.47748896947538,0,0,0,0.140669416410513,0,0,0,1.59398390600856,0,0,0.102268682502155,0,1.24415835064723,0,0,0,0.591860433821602,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,0,0.448788222048861,0.325942115766024,0.31900115973192,5.86224597771919,1.5991043280559,0,0,0,0,0,0,0,0,0.843992258112108,1.63232808159148,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0.247127877893006,0.626531697032732,0,0.802577647298789,0,0,0,0,0.394584402849391,0,1.22429104652196,0.379119477770928,0,0,0,0,0,0,0.569219092059585,0,0,0.293977192243133,0,0.873633341210151,0,0,0,0,0,0,0.677942222341597,0.411125773940253,0.19871461170299,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,1.28929632425987,0,1.11712960508902,0.458320848023367,0.717873024576814,0.599037001496973,0.429226048136571,0,0.268733889946905,1.44119953416961,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,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| |||
|short_description=p@chr13:111077143..111077162,+ | |||
}} |
Revision as of 18:40, 11 January 2014
Short description: | p@chr13:111077143..111077162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111077143..111077162, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.42e-12 | 15 |
endothelial cell | 1.17e-08 | 36 |
meso-epithelial cell | 2.36e-08 | 45 |
epithelial cell of nephron | 9.04e-08 | 15 |
kidney cortical cell | 1.29e-07 | 12 |
renal cortical epithelial cell | 1.29e-07 | 12 |
lining cell | 1.49e-07 | 58 |
barrier cell | 1.49e-07 | 58 |
glomerular cell | 2.54e-07 | 7 |
kidney corpuscule cell | 2.54e-07 | 7 |
glomerular endothelial cell | 6.03e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 4.48e-10 | 15 |
epithelial tube | 1.09e-08 | 117 |
nephron epithelium | 9.04e-08 | 15 |
renal tubule | 9.04e-08 | 15 |
nephron tubule | 9.04e-08 | 15 |
nephron | 9.04e-08 | 15 |
uriniferous tubule | 9.04e-08 | 15 |
nephrogenic mesenchyme | 9.04e-08 | 15 |
cortex of kidney | 1.29e-07 | 12 |
renal parenchyma | 1.29e-07 | 12 |
primitive nephron | 2.54e-07 | 7 |
renal glomerulus | 2.54e-07 | 7 |
renal corpuscle | 2.54e-07 | 7 |
glomerular capsule | 2.54e-07 | 7 |
metanephric mesenchyme | 2.54e-07 | 7 |
glomerular tuft | 2.54e-07 | 7 |
S-shaped body | 2.54e-07 | 7 |
renal vesicle | 2.54e-07 | 7 |
comma-shaped body | 2.54e-07 | 7 |
extraembryonic structure | 3.00e-07 | 24 |
excretory tube | 3.42e-07 | 16 |
kidney epithelium | 3.42e-07 | 16 |