FFCP PHASE1:Hg19::chr11:62370475..62370497,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr11:62370475..62370497,- | |||
|id=chr11:62370475..62370497,- | |||
|ontology_enrichment_celltype=CL:0000349!1.57e-08!3;CL:0002577!1.57e-08!3;CL:0002541!1.87e-07!3;CL:0002368!4.92e-07!13;CL:0002076!9.24e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.74e-28;19!CL:0002577;7.15e-22;3!CL:0002536;9.73e-15;2!CL:0000575;5.27e-14;2!CL:0002537;3.63e-13;5!CL:0002252;7.59e-08;1!CL:0002563;1.93e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.61e-28,19;CL:0002577,7.95e-22,3;CL:0002536,9.74e-15,2;CL:0000575,5.65e-14,2;CL:0002537,3.56e-13,5;CL:0002252,9.94e-08,1;CL:0002563,1.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.90e-08;1!UBERON:0008425;7.59e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.27e-08;1!DOID:326;2.27e-08;1!DOID:3978;2.27e-08;1!DOID:3394;2.27e-08;1!DOID:5844;2.27e-08;1!DOID:1799;7.59e-08;1!DOID:10165;7.59e-08;1!DOID:1798;7.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.19e-08,1;DOID:326,2.19e-08,1;DOID:3978,2.19e-08,1;DOID:3394,2.19e-08,1;DOID:5844,2.19e-08,1;DOID:1799,9.29e-08,1;DOID:10165,9.29e-08,1;DOID:1798,9.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.10e-23!14;UBERON:0000158!5.10e-23!14;UBERON:0003124!3.03e-16!7;UBERON:0000478!4.63e-12!24;UBERON:0001987!1.74e-10!4;UBERON:0004340!1.74e-10!4;UBERON:0004923!9.49e-10!57;UBERON:0000305!5.05e-09!7;UBERON:0000077!5.30e-08!130;UBERON:0000064!6.94e-08!219;UBERON:0004119!7.64e-08!169;UBERON:0000925!7.64e-08!169;UBERON:0006595!7.64e-08!169;UBERON:0004871!8.09e-08!8;UBERON:0000476!1.87e-07!3;UBERON:0000920!1.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.27e-24;7!UBERON:0005631;3.38e-24;10!UBERON:0000158;3.38e-24;10!UBERON:0000478;6.55e-22;24!UBERON:0001987;1.51e-16;4!UBERON:0000002;2.42e-10;6!UBERON:0001560;2.42e-10;6!UBERON:0001043;5.01e-10;3!UBERON:0001723;8.20e-10;3!UBERON:0001033;8.20e-10;3!UBERON:0002372;2.70e-08;1!UBERON:0001961;2.70e-08;1!UBERON:0001744;2.70e-08;1!UBERON:0001042;2.70e-08;1!UBERON:0001735;2.70e-08;1!UBERON:0001052;1.44e-07;4!UBERON:0001242;1.93e-07;4!UBERON:0001262;1.93e-07;4!UBERON:0004786;1.93e-07;4!UBERON:0004808;1.93e-07;4!UBERON:0001277;1.93e-07;4!UBERON:0000964;1.93e-07;4!UBERON:0010409;1.93e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.39e-38,14;UBERON:0000158,1.39e-38,14;UBERON:0000305,1.24e-24,7;UBERON:0000478,6.41e-22,24;UBERON:0004871,1.55e-21,8;UBERON:0001987,1.63e-16,4;UBERON:0004340,1.63e-16,4;UBERON:0003124,4.40e-16,7;UBERON:0004923,1.11e-12,66;UBERON:0000995,3.92e-11,21;UBERON:0005795,1.33e-10,22;UBERON:0003975,1.33e-10,22;UBERON:0000002,2.34e-10,6;UBERON:0001560,2.34e-10,6;UBERON:0001043,5.74e-10,3;UBERON:0009143,5.74e-10,3;UBERON:0001723,8.58e-10,3;UBERON:0001033,8.58e-10,3;UBERON:0010056,8.58e-10,3;UBERON:0004175,2.89e-09,25;UBERON:0002372,2.71e-08,1;UBERON:0001961,2.71e-08,1;UBERON:0001744,2.71e-08,1;UBERON:0001735,2.71e-08,1;UBERON:0001052,1.44e-07,4;UBERON:0001242,1.70e-07,4;UBERON:0001262,1.70e-07,4;UBERON:0004786,1.70e-07,4;UBERON:0004808,1.70e-07,4;UBERON:0001277,1.70e-07,4;UBERON:0000964,2.00e-07,4;UBERON:0010409,2.00e-07,4;UBERON:0004348,2.00e-07,4;UBERON:0005427,2.00e-07,4;UBERON:0003100,3.02e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,4.36882744260345,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.860413786167011,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,7.57818928615649,11.6504807657348,8.16453791990137,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0.146508179271894,0,0,0,6.20735660317994,4.45447021248958,8.90766036087773,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,1.74919999992391,0,2.73104275885199,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,1.53366118706464,1.84680620409113,0,0.23056390438806,0.179515288819544,0.54323685961004,1.5950057986596,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21882889212564,0.34945333648406,0,0,0,0,8.92298951693459,0,0,0,0,0,0.586654148204409,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,7.78748101946065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30953347240711,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0.156986185701028,0,2.24217730651031,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,3.83821167421766,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,2.8303177226605,1.36893320434112,5.59022040021076,1.43444410785353,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr11:62370475..62370497,- | |||
}} |
Revision as of 08:09, 11 January 2014
Short description: | p@chr11:62370475..62370497, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62370475..62370497, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.61e-28 | 19 |
placental epithelial cell | 7.95e-22 | 3 |
amniotic epithelial cell | 9.74e-15 | 2 |
corneal epithelial cell | 5.65e-14 | 2 |
amnion mesenchymal stem cell | 3.56e-13 | 5 |
epithelial cell of esophagus | 9.94e-08 | 1 |
intestinal epithelial cell | 1.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.39e-38 | 14 |
membranous layer | 1.39e-38 | 14 |
amnion | 1.24e-24 | 7 |
extraembryonic structure | 6.41e-22 | 24 |
somatic layer of lateral plate mesoderm | 1.55e-21 | 8 |
placenta | 1.63e-16 | 4 |
allantois | 1.63e-16 | 4 |
chorion | 4.40e-16 | 7 |
organ component layer | 1.11e-12 | 66 |
uterus | 3.92e-11 | 21 |
embryonic uterus | 1.33e-10 | 22 |
internal female genitalia | 1.33e-10 | 22 |
uterine cervix | 2.34e-10 | 6 |
neck of organ | 2.34e-10 | 6 |
esophagus | 5.74e-10 | 3 |
esophageal region | 5.74e-10 | 3 |
tongue | 8.58e-10 | 3 |
gustatory system | 8.58e-10 | 3 |
future tongue | 8.58e-10 | 3 |
internal genitalia | 2.89e-09 | 25 |
tonsil | 2.71e-08 | 1 |
mucosa-associated lymphoid tissue | 2.71e-08 | 1 |
lymphoid tissue | 2.71e-08 | 1 |
tonsillar ring | 2.71e-08 | 1 |
rectum | 1.44e-07 | 4 |
intestinal mucosa | 1.70e-07 | 4 |
wall of intestine | 1.70e-07 | 4 |
gastrointestinal system mucosa | 1.70e-07 | 4 |
gastrointestinal system epithelium | 1.70e-07 | 4 |
intestinal epithelium | 1.70e-07 | 4 |
cornea | 2.00e-07 | 4 |
eye surface | 2.00e-07 | 4 |
optic eminence | 2.00e-07 | 4 |
corneal primordium | 2.00e-07 | 4 |
female organism | 3.02e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.19e-08 | 1 |
ischemia | 2.19e-08 | 1 |
extrinsic cardiomyopathy | 2.19e-08 | 1 |
myocardial ischemia | 2.19e-08 | 1 |
myocardial infarction | 2.19e-08 | 1 |
islet cell tumor | 9.29e-08 | 1 |
endocrine pancreas cancer | 9.29e-08 | 1 |
pancreatic endocrine carcinoma | 9.29e-08 | 1 |