FFCP PHASE1:Hg19::chr11:122288906..122288919,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3105 | |||
|description=CAGE_peak_at_chr11:122288906..122288919,- | |||
|id=chr11:122288906..122288919,- | |||
|ontology_enrichment_celltype=CL:0002541!7.26e-20!3;CL:0002536!3.74e-14!2;CL:1000415!9.83e-14!2;CL:0002537!1.87e-12!5;CL:0000349!1.89e-09!3;CL:0002577!1.89e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.10e-50;19!CL:0002536;1.60e-31;2!CL:0002537;3.66e-28;5!CL:0002541;3.27e-21;3!CL:0002535;3.71e-09;2!CL:1000415;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.47e-50,19;CL:0002536,1.87e-31,2;CL:0002537,3.66e-28,5;CL:0002541,3.63e-21,3;CL:0002535,3.71e-09,2;CL:1000415,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.53e-17;1 | |||
|ontology_enrichment_disease=DOID:1799!1.39e-07!1;DOID:10165!1.39e-07!1;DOID:1798!1.39e-07!1;DOID:178!2.17e-07!1;DOID:326!2.17e-07!1;DOID:3978!2.17e-07!1;DOID:3394!2.17e-07!1;DOID:5844!2.17e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.37e-54!14;UBERON:0000158!5.37e-54!14;UBERON:0003124!1.22e-32!7;UBERON:0000478!1.16e-30!24;UBERON:0000305!2.33e-23!7;UBERON:0004871!2.02e-20!8;UBERON:0000476!7.26e-20!3;UBERON:0000920!7.26e-20!3;UBERON:0001987!3.29e-15!4;UBERON:0004340!3.29e-15!4;UBERON:0004923!1.01e-11!57;UBERON:0002110!1.89e-09!3;UBERON:0006242!1.89e-09!3;UBERON:0002294!1.45e-08!7;UBERON:0001173!1.45e-08!7;UBERON:0004912!1.45e-08!7;UBERON:0000995!1.93e-07!21;UBERON:0000997!2.63e-07!1;UBERON:0005056!2.63e-07!1;UBERON:0005795!4.33e-07!22;UBERON:0003975!4.33e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.15e-74;10!UBERON:0000158;7.15e-74;10!UBERON:0000305;2.00e-54;7!UBERON:0000478;1.71e-50;24!UBERON:0003124;3.27e-21;3!UBERON:0000920;3.27e-21;3!UBERON:0001987;2.96e-16;4!UBERON:0004923;1.32e-09;55!UBERON:0006955;3.71e-09;2!UBERON:0004801;3.71e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.19e-87,14;UBERON:0000158,8.19e-87,14;UBERON:0000305,2.24e-54,7;UBERON:0000478,1.87e-50,24;UBERON:0004871,1.28e-47,8;UBERON:0003124,5.68e-35,7;UBERON:0000920,3.63e-21,3;UBERON:0004923,6.04e-18,66;UBERON:0001987,2.85e-16,4;UBERON:0004340,2.85e-16,4;UBERON:0006955,3.71e-09,2;UBERON:0004801,3.71e-09,2;UBERON:0000995,3.35e-07,21;UBERON:0005795,6.75e-07,22;UBERON:0003975,6.75e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.49506195408276,2.37390280405608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,1.90995587790152,3.56357616999166,4.30024982938925,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.217294743844016,2.23300811812344,0.457987967009312,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,4.70119715534174,0,0,0,0,0,0,0,0,0,0,0,2.15106521008283,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,4.70122561861986,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:122288906..122288919,- | |||
}} |
Revision as of 10:54, 11 January 2014
Short description: | p@chr11:122288906..122288919, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr11:122288906..122288919, - |
Coexpression cluster: | C3105_placenta_amniotic_chorionic_Placental_epidermoid_gall_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.47e-50 | 19 |
amniotic epithelial cell | 1.87e-31 | 2 |
amnion mesenchymal stem cell | 3.66e-28 | 5 |
chorionic membrane mesenchymal stem cell | 3.63e-21 | 3 |
epithelial cell of cervix | 3.71e-09 | 2 |
epithelial cell of gall bladder | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.19e-87 | 14 |
membranous layer | 8.19e-87 | 14 |
amnion | 2.24e-54 | 7 |
extraembryonic structure | 1.87e-50 | 24 |
somatic layer of lateral plate mesoderm | 1.28e-47 | 8 |
chorion | 5.68e-35 | 7 |
egg chorion | 3.63e-21 | 3 |
organ component layer | 6.04e-18 | 66 |
placenta | 2.85e-16 | 4 |
allantois | 2.85e-16 | 4 |
uterine epithelium | 3.71e-09 | 2 |
cervix epithelium | 3.71e-09 | 2 |
uterus | 3.35e-07 | 21 |
embryonic uterus | 6.75e-07 | 22 |
internal female genitalia | 6.75e-07 | 22 |