FFCP PHASE1:Hg19::chrX:134049341..134049352,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56180|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25235|TSSclassifier=S|UniProt=Q9UJG1|association_with_transcript=-44bp_to_ENST00000370783,NM_019556,uc004eyb.2,uc010nrv.2,uc011mvr.1_5end|coexpression_cluster_id=C2953|description=CAGE_peak_4_at_MOSPD1_5end|id=chrX:134049341..134049352,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;5.37e-09;5!CL:0002504;1.19e-08;3!CL:1000279;1.19e-08;3!CL:1000280;1.19e-08;3!CL:0000764;3.94e-07;2!CL:0000558;3.94e-07;2|ontology_enrichment_celltype_v019_2=CL:0002504,3.55e-09,3;CL:1000279,3.55e-09,3;CL:1000280,3.55e-09,3;CL:0002322,1.11e-08,5;CL:0000764,4.01e-07,2;CL:0000765,4.01e-07,2;CL:0000050,4.01e-07,2;CL:0000038,4.01e-07,2;CL:0000558,4.01e-07,2;CL:0000547,4.01e-07,2;CL:0000549,4.01e-07,2;CL:0000550,4.01e-07,2;CL:0000552,4.01e-07,2;CL:0000039,7.38e-07,7;CL:0000586,7.38e-07,7|ontology_enrichment_development_v019=UBERON:0009117;9.06e-07;10!UBERON:0005564;9.06e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;9.12e-09;3!DOID:127;9.12e-09;3|ontology_enrichment_disease_v019_2=DOID:0060084,4.18e-09,3;DOID:127,4.18e-09,3;DOID:0060072,6.63e-07,4|ontology_enrichment_uberon=UBERON:0005156!7.26e-07!59;UBERON:0000990!7.26e-07!59|ontology_enrichment_uberon_v019=UBERON:0003101;2.58e-10;22!UBERON:0000079;2.58e-10;22!UBERON:0000473;1.41e-08;8!UBERON:0000991;6.74e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0003101,1.64e-10,22;UBERON:0000079,1.64e-10,22;UBERON:0000473,6.94e-09,8;UBERON:0005156,8.54e-08,59;UBERON:0000990,8.54e-08,59;UBERON:0000991,4.46e-07,21;UBERON:0009196,4.46e-07,21;UBERON:0009117,4.46e-07,21;UBERON:0005564,4.46e-07,21|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0.547497700291537,0,0,0.246301768349837,0.236132343941038,0.393364276848904,0,0,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.65156653411535,0,0.368277635987565,0,0.211255286311942,0.637812899895131,0.209658645508376,0.561643155732475,0.450530678524519,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.501559486172034,0,0.473447805734733,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0,0.43917392846563,0.261958150995425,0.364295288292542,0,0,0,1.06366368415092,0,0,0.371457501329565,0.198762407366705,0,0,0,1.25849830862972,0,0.208994966536811,0.258416759169329,1.06729878806013,0.66944122552934,0,0,0.24406205754817,0,0,0.446498641420399,0,0.675668882899933,1.53316637465883,0,0.366403487860815,2.63560834872127,0,0.436094052142534,0,0.379891534993739,1.72131935057184,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.326923806226917,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0.277064115484183,0.877955241761676,0,0,0.226864366320042,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0,0.558350568994769,0.168776332241266,0.194874010322397,0,0.460249493211497,0.80823028409406,0.710019185033229,0.503760491138201,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,1.21973706129595,0.795178609928912,2.09149097165133,2.17688215532278,1.00928340350251,0.72995471815166,0,0,0,0,0.721879481669586,0.709840800239063,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,1.21348177344148,0.784885860501384,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,2.09080345523293,0.686271241194102,0.329250856225877,0,0.301586917234893,0.277765335475589,0.977424915930974,0,0,0.231860809950154,0.587043471179108,0.288732895522148,0,0,0,0,0.492434012174795,1.17002132569619,1.18904929830983,0,0.503946384596579,0.425325291727159,0.268675568108545,0.581267877027924,0.383382679165211,0,0.264145302039678,0,0.144119953416961,0.25248486685276,0.317489471460845,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0.87192013766656,0.4400297149257,1.29271715757778,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,0.714889968290738,0.542621605391443,0,0,0.710783897485092,0.791951872933429,2.1100756394171,0.871533458600294,0.99972991182057,0,0,4.21667878966063,0.479249710983165,1.14861935834114,0,0.579125226670317,0.205476322550383,0,1.00876629594175,0,0.215627574859517,0.256686072559497,0.254094624222463,1.301398538576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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56180 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25235 | |||
|TSSclassifier=S | |||
|UniProt=Q9UJG1 | |||
|association_with_transcript=-44bp_to_ENST00000370783,NM_019556,uc004eyb.2,uc010nrv.2,uc011mvr.1_5end | |||
|coexpression_cluster_id=C2953 | |||
|description=CAGE_peak_4_at_MOSPD1_5end | |||
|id=chrX:134049341..134049352,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.37e-09;5!CL:0002504;1.19e-08;3!CL:1000279;1.19e-08;3!CL:1000280;1.19e-08;3!CL:0000764;3.94e-07;2!CL:0000558;3.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,3.55e-09,3;CL:1000279,3.55e-09,3;CL:1000280,3.55e-09,3;CL:0002322,1.11e-08,5;CL:0000764,4.01e-07,2;CL:0000765,4.01e-07,2;CL:0000050,4.01e-07,2;CL:0000038,4.01e-07,2;CL:0000558,4.01e-07,2;CL:0000547,4.01e-07,2;CL:0000549,4.01e-07,2;CL:0000550,4.01e-07,2;CL:0000552,4.01e-07,2;CL:0000039,7.38e-07,7;CL:0000586,7.38e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.06e-07;10!UBERON:0005564;9.06e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.12e-09;3!DOID:127;9.12e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.18e-09,3;DOID:127,4.18e-09,3;DOID:0060072,6.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005156!7.26e-07!59;UBERON:0000990!7.26e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.58e-10;22!UBERON:0000079;2.58e-10;22!UBERON:0000473;1.41e-08;8!UBERON:0000991;6.74e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,1.64e-10,22;UBERON:0000079,1.64e-10,22;UBERON:0000473,6.94e-09,8;UBERON:0005156,8.54e-08,59;UBERON:0000990,8.54e-08,59;UBERON:0000991,4.46e-07,21;UBERON:0009196,4.46e-07,21;UBERON:0009117,4.46e-07,21;UBERON:0005564,4.46e-07,21 | |||
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| |||
|short_description=p4@MOSPD1 | |||
}} |
Revision as of 10:49, 14 September 2013
Short description: | p4@MOSPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MOSPD1_5end |
Coexpression cluster: | C2953_Reticulocytes_testicular_leiomyoma_Prostate_Whole_Mesenchymal_hepatoma |
Association with transcript: | -44bp_to_ENST00000370783, NM_019556, uc004eyb.2, uc010nrv.2, uc011mvr.1_5end |
EntrezGene: | MOSPD1 |
HGNC: | 25235 |
UniProt: | Q9UJG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 3.55e-09 | 3 |
smooth muscle cell of large intestine | 3.55e-09 | 3 |
smooth muscle cell of colon | 3.55e-09 | 3 |
embryonic stem cell | 1.11e-08 | 5 |
erythroid lineage cell | 4.01e-07 | 2 |
erythroblast | 4.01e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.01e-07 | 2 |
erythroid progenitor cell | 4.01e-07 | 2 |
reticulocyte | 4.01e-07 | 2 |
proerythroblast | 4.01e-07 | 2 |
basophilic erythroblast | 4.01e-07 | 2 |
polychromatophilic erythroblast | 4.01e-07 | 2 |
orthochromatic erythroblast | 4.01e-07 | 2 |
germ line cell | 7.38e-07 | 7 |
germ cell | 7.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
male organism | 1.64e-10 | 22 |
male reproductive system | 1.64e-10 | 22 |
testis | 6.94e-09 | 8 |
reproductive structure | 8.54e-08 | 59 |
reproductive system | 8.54e-08 | 59 |
gonad | 4.46e-07 | 21 |
indifferent external genitalia | 4.46e-07 | 21 |
indifferent gonad | 4.46e-07 | 21 |
gonad primordium | 4.46e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.18e-09 | 3 |
leiomyoma | 4.18e-09 | 3 |
benign neoplasm | 6.63e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.