FFCP PHASE1:Hg19::chrX:24665417..24665469,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9468|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8755|TSSclassifier=S|UniProt=Q9Y5K3|association_with_transcript=0bp_to_NM_001163265,NM_004845,uc004dbi.2,uc004dbk.3_5end|description=CAGE_peak_1_at_PCYT1B_5end|id=chrX:24665417..24665469,-|ontology_enrichment_celltype=CL:0002319!3.81e-08!25;CL:0000221!9.39e-08!71;CL:0000047!1.14e-07!8;CL:0000133!1.50e-07!59|ontology_enrichment_celltype_v019=CL:0002319;3.18e-10;25!CL:0000540;1.81e-09;6!CL:0000404;1.81e-09;6!CL:0002322;1.16e-08;5|ontology_enrichment_celltype_v019_2=CL:0000047,1.34e-12,8;CL:0002319,3.13e-10,25;CL:0000540,1.38e-09,6;CL:0000031,1.38e-09,6;CL:0000404,1.38e-09,6;CL:0002322,1.30e-08,5;CL:0000133,1.85e-07,59|ontology_enrichment_development_v019=CL:0000031;1.81e-09;6!UBERON:0006601;8.17e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.43e-37!94;UBERON:0001016!3.43e-37!94;UBERON:0005743!8.34e-37!86;UBERON:0001017!5.13e-35!82;UBERON:0001049!1.31e-33!57;UBERON:0005068!1.31e-33!57;UBERON:0006241!1.31e-33!57;UBERON:0007135!1.31e-33!57;UBERON:0007023!1.14e-31!115;UBERON:0002346!1.44e-29!90;UBERON:0003075!1.81e-29!86;UBERON:0007284!1.81e-29!86;UBERON:0002616!2.74e-28!59;UBERON:0000955!1.97e-26!69;UBERON:0006238!1.97e-26!69;UBERON:0002780!5.99e-26!41;UBERON:0001890!5.99e-26!41;UBERON:0006240!5.99e-26!41;UBERON:0001893!1.25e-25!34;UBERON:0002020!1.70e-25!34;UBERON:0003528!1.70e-25!34;UBERON:0000924!6.06e-25!173;UBERON:0006601!6.06e-25!173;UBERON:0003080!6.77e-25!42;UBERON:0002791!7.29e-25!33;UBERON:0001869!1.41e-24!32;UBERON:0004121!1.63e-24!169;UBERON:0003056!3.44e-24!61;UBERON:0000153!1.43e-20!129;UBERON:0007811!1.43e-20!129;UBERON:0000033!2.62e-20!123;UBERON:0000956!3.04e-19!25;UBERON:0000203!3.04e-19!25;UBERON:0002619!1.17e-17!22;UBERON:0001950!5.49e-16!20;UBERON:0003076!9.65e-10!15;UBERON:0003057!9.65e-10!15;UBERON:0000119!2.63e-08!312;UBERON:0004733!2.96e-08!12;UBERON:0002028!2.96e-08!12;UBERON:0007277!2.96e-08!12;UBERON:0000025!6.04e-08!194;UBERON:0002420!7.69e-08!9;UBERON:0007245!7.69e-08!9;UBERON:0010009!7.69e-08!9;UBERON:0010011!7.69e-08!9;UBERON:0000454!7.69e-08!9;UBERON:0000064!1.01e-07!219;UBERON:0000483!1.03e-07!309;UBERON:0002308!1.11e-07!9;UBERON:0000125!1.11e-07!9;UBERON:0004732!2.81e-07!13;UBERON:0000922!3.41e-07!612|ontology_enrichment_uberon_v019=UBERON:0001893;1.51e-39;34!UBERON:0001869;1.61e-39;32!UBERON:0002791;2.94e-39;32!UBERON:0003528;3.10e-39;34!UBERON:0002020;3.10e-39;34!UBERON:0000956;3.58e-34;25!UBERON:0000203;3.58e-34;25!UBERON:0002780;1.13e-31;41!UBERON:0001890;1.13e-31;41!UBERON:0002619;4.66e-31;22!UBERON:0000073;1.91e-30;53!UBERON:0002616;1.91e-30;53!UBERON:0001950;4.73e-28;20!UBERON:0001017;4.54e-18;75!UBERON:0000955;1.67e-17;68!UBERON:0001016;4.03e-16;83!UBERON:0002420;6.03e-13;9!UBERON:0007245;6.03e-13;9!UBERON:0010009;6.03e-13;9!UBERON:0010011;6.03e-13;9!UBERON:0000454;6.03e-13;9!UBERON:0000125;1.10e-12;9!UBERON:0002308;1.10e-12;9!UBERON:0007023;8.95e-11;114!UBERON:0009663;1.42e-10;7!UBERON:0000200;2.13e-10;6!UBERON:0004733;5.25e-10;12!UBERON:0002028;5.25e-10;12!UBERON:0004732;4.64e-09;13!UBERON:0001872;9.40e-09;5!UBERON:0002298;1.26e-08;6!UBERON:0000349;1.56e-08;5!UBERON:0001871;2.13e-08;6!UBERON:0002021;3.22e-08;5!UBERON:0000369;7.38e-08;4!UBERON:0002435;7.38e-08;4!UBERON:0000204;7.38e-08;4!UBERON:0002680;9.59e-07;9!UBERON:0001895;9.59e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.74e-53,56;UBERON:0005068,2.74e-53,56;UBERON:0006241,2.74e-53,56;UBERON:0007135,2.74e-53,56;UBERON:0001017,1.69e-52,81;UBERON:0000073,3.66e-52,53;UBERON:0002616,3.66e-52,53;UBERON:0001016,1.00e-50,89;UBERON:0002346,5.09e-47,86;UBERON:0003075,5.48e-46,82;UBERON:0007284,5.48e-46,82;UBERON:0001893,9.32e-46,34;UBERON:0003528,1.64e-45,34;UBERON:0002020,1.64e-45,34;UBERON:0001869,7.60e-44,32;UBERON:0002791,3.38e-43,32;UBERON:0002780,3.70e-43,41;UBERON:0001890,3.70e-43,41;UBERON:0003080,3.70e-43,41;UBERON:0006240,3.70e-43,41;UBERON:0000955,2.22e-40,68;UBERON:0006238,2.22e-40,68;UBERON:0003056,2.38e-40,61;UBERON:0010371,5.05e-38,104;UBERON:0007023,2.21e-34,114;UBERON:0000956,3.83e-34,25;UBERON:0000203,3.83e-34,25;UBERON:0004121,7.69e-32,171;UBERON:0000924,7.69e-32,171;UBERON:0006601,7.69e-32,171;UBERON:0002619,2.84e-31,22;UBERON:0001950,3.11e-28,20;UBERON:0010314,3.54e-25,132;UBERON:0011216,2.81e-16,223;UBERON:0002420,6.62e-13,9;UBERON:0007245,6.62e-13,9;UBERON:0010009,6.62e-13,9;UBERON:0010011,6.62e-13,9;UBERON:0000454,6.62e-13,9;UBERON:0000125,1.28e-12,9;UBERON:0002308,1.28e-12,9;UBERON:0003076,3.18e-11,15;UBERON:0003057,3.18e-11,15;UBERON:0000200,1.98e-10,6;UBERON:0009663,2.07e-10,7;UBERON:0004733,4.32e-10,12;UBERON:0002028,4.32e-10,12;UBERON:0007277,4.32e-10,12;UBERON:0000025,1.55e-09,192;UBERON:0004732,3.89e-09,13;UBERON:0001872,9.79e-09,5;UBERON:0000349,1.15e-08,5;UBERON:0002298,1.19e-08,6;UBERON:0001871,1.73e-08,6;UBERON:0002021,2.49e-08,5;UBERON:0000369,8.00e-08,4;UB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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8755 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y5K3 | |||
|association_with_transcript=0bp_to_NM_001163265,NM_004845,uc004dbi.2,uc004dbk.3_5end | |||
|description=CAGE_peak_1_at_PCYT1B_5end | |||
|id=chrX:24665417..24665469,- | |||
|ontology_enrichment_celltype=CL:0002319!3.81e-08!25;CL:0000221!9.39e-08!71;CL:0000047!1.14e-07!8;CL:0000133!1.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.18e-10;25!CL:0000540;1.81e-09;6!CL:0000404;1.81e-09;6!CL:0002322;1.16e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.34e-12,8;CL:0002319,3.13e-10,25;CL:0000540,1.38e-09,6;CL:0000031,1.38e-09,6;CL:0000404,1.38e-09,6;CL:0002322,1.30e-08,5;CL:0000133,1.85e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.81e-09;6!UBERON:0006601;8.17e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@PCYT1B | |||
}} |
Revision as of 11:39, 14 September 2013
Short description: | p1@PCYT1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PCYT1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001163265, NM_004845, uc004dbi.2, uc004dbk.3_5end |
EntrezGene: | PCYT1B |
HGNC: | 8755 |
UniProt: | Q9Y5K3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.34e-12 | 8 |
neural cell | 3.13e-10 | 25 |
neuron | 1.38e-09 | 6 |
neuroblast | 1.38e-09 | 6 |
electrically signaling cell | 1.38e-09 | 6 |
embryonic stem cell | 1.30e-08 | 5 |
neurectodermal cell | 1.85e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.