FFCP PHASE1:Hg19::chr6:31088214..31088228,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1041|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1802|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000376288,uc003nsm.1_5end|coexpression_cluster_id=C68|description=CAGE_peak_1_at_CDSN_5end|id=chr6:31088214..31088228,-|ontology_enrichment_celltype=CL:0002159!2.01e-13!13;CL:0000622!1.35e-12!5;CL:0000154!2.07e-10!6;CL:0002327!1.29e-09!4;CL:0000349!9.68e-09!3;CL:0002577!9.68e-09!3;CL:0002541!3.93e-08!3;CL:0002623!3.93e-08!3;CL:0002076!4.18e-08!43;CL:0000066!5.01e-08!254;CL:0002621!5.58e-08!3;CL:0000362!8.17e-08!8;CL:0002077!1.30e-07!33;CL:0000453!3.01e-07!5;CL:0002328!4.75e-07!3;CL:0000150!9.22e-07!9|ontology_enrichment_celltype_v019=CL:0000349;9.31e-23;19!CL:0000622;8.75e-19;5!CL:0000154;1.32e-15;6!CL:0002577;8.81e-13;3!CL:0002159;2.65e-12;14!CL:0002541;8.11e-12;3!CL:0002623;8.26e-12;3!CL:0002621;1.33e-11;3!CL:0000362;1.69e-10;9!CL:0000150;2.71e-10;9!CL:0002536;7.29e-09;2!CL:0000317;1.07e-08;2!CL:1000448;1.07e-08;2!CL:0002308;1.07e-08;2!CL:0002140;1.07e-08;2!CL:0002327;1.25e-08;4!CL:0000575;3.31e-08;2!CL:0002537;7.15e-08;5!CL:0001014;9.21e-08;2!CL:0001016;9.21e-08;2!CL:0000312;1.80e-07;5|ontology_enrichment_celltype_v019_2=CL:0000349,9.12e-23,19;CL:0000622,8.28e-19,5;CL:0000154,1.27e-15,6;CL:0002577,8.81e-13,3;CL:0002159,2.60e-12,14;CL:0002541,7.82e-12,3;CL:0002623,7.82e-12,3;CL:0002621,1.35e-11,3;CL:0000362,1.67e-10,9;CL:0000150,2.63e-10,9;CL:0002536,7.29e-09,2;CL:0000317,1.07e-08,2;CL:1000448,1.07e-08,2;CL:0002308,1.07e-08,2;CL:0002140,1.07e-08,2;CL:0002327,1.25e-08,4;CL:0000575,3.25e-08,2;CL:0002537,7.15e-08,5;CL:0001014,7.99e-08,2;CL:0001016,7.99e-08,2;CL:0000312,1.78e-07,5;CL:0002077,2.53e-07,34|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:5093!3.47e-10!4;DOID:1612!3.47e-10!4|ontology_enrichment_disease_v019=DOID:5093;5.26e-15;4!DOID:1612;5.26e-15;4|ontology_enrichment_disease_v019_2=DOID:5093,4.89e-15,4;DOID:1612,4.89e-15,4|ontology_enrichment_uberon=UBERON:0005631!2.24e-24!14;UBERON:0000158!2.24e-24!14;UBERON:0003124!2.47e-17!7;UBERON:0000478!3.61e-15!24;UBERON:0001987!6.72e-11!4;UBERON:0004340!6.72e-11!4;UBERON:0001911!1.29e-09!4;UBERON:0005333!1.29e-09!4;UBERON:0008425!1.29e-09!4;UBERON:0005311!1.29e-09!4;UBERON:0000305!2.23e-09!7;UBERON:0004923!7.88e-09!57;UBERON:0000476!3.93e-08!3;UBERON:0000920!3.93e-08!3;UBERON:0004871!3.93e-08!8;UBERON:0001949!5.58e-08!3;UBERON:0003102!9.23e-08!95;UBERON:0000166!1.61e-07!21;UBERON:0001004!3.41e-07!72;UBERON:0004815!4.75e-07!3;UBERON:0002031!4.75e-07!3;UBERON:0005795!4.92e-07!22|ontology_enrichment_uberon_v019=UBERON:0000478;1.76e-24;24!UBERON:0005631;8.97e-24;10!UBERON:0000158;8.97e-24;10!UBERON:0001987;3.76e-16;4!UBERON:0000305;3.42e-14;7!UBERON:0003124;8.11e-12;3!UBERON:0000920;8.11e-12;3!UBERON:0001949;1.33e-11;3!UBERON:0002419;1.07e-08;2!UBERON:0007771;1.07e-08;2!UBERON:0003297;1.07e-08;2!UBERON:0001821;1.07e-08;2!UBERON:0003487;1.07e-08;2!UBERON:0001820;1.07e-08;2!UBERON:0001003;1.09e-08;15!UBERON:0007376;1.09e-08;15!UBERON:0001911;1.25e-08;4!UBERON:0010371;3.15e-08;31!UBERON:0000165;4.00e-07;28|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.78e-38,14;UBERON:0000158,8.78e-38,14;UBERON:0003124,3.15e-26,7;UBERON:0000478,1.72e-24,24;UBERON:0001987,3.76e-16,4;UBERON:0004340,3.76e-16,4;UBERON:0000305,3.42e-14,7;UBERON:0004871,2.27e-12,8;UBERON:0000920,7.82e-12,3;UBERON:0001949,1.35e-11,3;UBERON:0004923,1.54e-09,66;UBERON:0000166,1.99e-09,22;UBERON:0002419,1.07e-08,2;UBERON:0007771,1.07e-08,2;UBERON:0003297,1.07e-08,2;UBERON:0001821,1.07e-08,2;UBERON:0003487,1.07e-08,2;UBERON:0001820,1.07e-08,2;UBERON:0005089,1.07e-08,2;UBERON:0005088,1.07e-08,2;UBERON:0001003,1.08e-08,15;UBERON:0007376,1.08e-08,15;UBERON:0007383,1.08e-08,15;UBERON:0001911,1.25e-08,4;UBERON:0005333,1.25e-08,4;UBERON:0008425,1.25e-08,4;UBERON:0005311,1.25e-08,4;UBERON:0003102,8.37e-08,99;UBERON:0005795,2.35e-07,22;UBERON:0000165,7.76e-07,29;UBERON:0000930,7.76e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,43.6882744260345,39.0375127778111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.44378352228064,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,5.35298357332899,0,0,0,0,5.82872461268068,12.6066710546706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0.747243402759005,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.3082582124541,3.00020732649918,9.46455164783713,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0089112558734,42.7126662378954,12.6666505238655,0.277765335475589,0,0,0,0,0,0,0,0,26.8669495306154,16.3112370798026,0,0,0,0,0.671928512795438,0.141775097242386,0.716468181622786,1.16253575405585,4.983974829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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1041 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1802 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000376288,uc003nsm.1_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_CDSN_5end | |||
|id=chr6:31088214..31088228,- | |||
|ontology_enrichment_celltype=CL:0002159!2.01e-13!13;CL:0000622!1.35e-12!5;CL:0000154!2.07e-10!6;CL:0002327!1.29e-09!4;CL:0000349!9.68e-09!3;CL:0002577!9.68e-09!3;CL:0002541!3.93e-08!3;CL:0002623!3.93e-08!3;CL:0002076!4.18e-08!43;CL:0000066!5.01e-08!254;CL:0002621!5.58e-08!3;CL:0000362!8.17e-08!8;CL:0002077!1.30e-07!33;CL:0000453!3.01e-07!5;CL:0002328!4.75e-07!3;CL:0000150!9.22e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.31e-23;19!CL:0000622;8.75e-19;5!CL:0000154;1.32e-15;6!CL:0002577;8.81e-13;3!CL:0002159;2.65e-12;14!CL:0002541;8.11e-12;3!CL:0002623;8.26e-12;3!CL:0002621;1.33e-11;3!CL:0000362;1.69e-10;9!CL:0000150;2.71e-10;9!CL:0002536;7.29e-09;2!CL:0000317;1.07e-08;2!CL:1000448;1.07e-08;2!CL:0002308;1.07e-08;2!CL:0002140;1.07e-08;2!CL:0002327;1.25e-08;4!CL:0000575;3.31e-08;2!CL:0002537;7.15e-08;5!CL:0001014;9.21e-08;2!CL:0001016;9.21e-08;2!CL:0000312;1.80e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.12e-23,19;CL:0000622,8.28e-19,5;CL:0000154,1.27e-15,6;CL:0002577,8.81e-13,3;CL:0002159,2.60e-12,14;CL:0002541,7.82e-12,3;CL:0002623,7.82e-12,3;CL:0002621,1.35e-11,3;CL:0000362,1.67e-10,9;CL:0000150,2.63e-10,9;CL:0002536,7.29e-09,2;CL:0000317,1.07e-08,2;CL:1000448,1.07e-08,2;CL:0002308,1.07e-08,2;CL:0002140,1.07e-08,2;CL:0002327,1.25e-08,4;CL:0000575,3.25e-08,2;CL:0002537,7.15e-08,5;CL:0001014,7.99e-08,2;CL:0001016,7.99e-08,2;CL:0000312,1.78e-07,5;CL:0002077,2.53e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!3.47e-10!4;DOID:1612!3.47e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.26e-15;4!DOID:1612;5.26e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.89e-15,4;DOID:1612,4.89e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.24e-24!14;UBERON:0000158!2.24e-24!14;UBERON:0003124!2.47e-17!7;UBERON:0000478!3.61e-15!24;UBERON:0001987!6.72e-11!4;UBERON:0004340!6.72e-11!4;UBERON:0001911!1.29e-09!4;UBERON:0005333!1.29e-09!4;UBERON:0008425!1.29e-09!4;UBERON:0005311!1.29e-09!4;UBERON:0000305!2.23e-09!7;UBERON:0004923!7.88e-09!57;UBERON:0000476!3.93e-08!3;UBERON:0000920!3.93e-08!3;UBERON:0004871!3.93e-08!8;UBERON:0001949!5.58e-08!3;UBERON:0003102!9.23e-08!95;UBERON:0000166!1.61e-07!21;UBERON:0001004!3.41e-07!72;UBERON:0004815!4.75e-07!3;UBERON:0002031!4.75e-07!3;UBERON:0005795!4.92e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.76e-24;24!UBERON:0005631;8.97e-24;10!UBERON:0000158;8.97e-24;10!UBERON:0001987;3.76e-16;4!UBERON:0000305;3.42e-14;7!UBERON:0003124;8.11e-12;3!UBERON:0000920;8.11e-12;3!UBERON:0001949;1.33e-11;3!UBERON:0002419;1.07e-08;2!UBERON:0007771;1.07e-08;2!UBERON:0003297;1.07e-08;2!UBERON:0001821;1.07e-08;2!UBERON:0003487;1.07e-08;2!UBERON:0001820;1.07e-08;2!UBERON:0001003;1.09e-08;15!UBERON:0007376;1.09e-08;15!UBERON:0001911;1.25e-08;4!UBERON:0010371;3.15e-08;31!UBERON:0000165;4.00e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.78e-38,14;UBERON:0000158,8.78e-38,14;UBERON:0003124,3.15e-26,7;UBERON:0000478,1.72e-24,24;UBERON:0001987,3.76e-16,4;UBERON:0004340,3.76e-16,4;UBERON:0000305,3.42e-14,7;UBERON:0004871,2.27e-12,8;UBERON:0000920,7.82e-12,3;UBERON:0001949,1.35e-11,3;UBERON:0004923,1.54e-09,66;UBERON:0000166,1.99e-09,22;UBERON:0002419,1.07e-08,2;UBERON:0007771,1.07e-08,2;UBERON:0003297,1.07e-08,2;UBERON:0001821,1.07e-08,2;UBERON:0003487,1.07e-08,2;UBERON:0001820,1.07e-08,2;UBERON:0005089,1.07e-08,2;UBERON:0005088,1.07e-08,2;UBERON:0001003,1.08e-08,15;UBERON:0007376,1.08e-08,15;UBERON:0007383,1.08e-08,15;UBERON:0001911,1.25e-08,4;UBERON:0005333,1.25e-08,4;UBERON:0008425,1.25e-08,4;UBERON:0005311,1.25e-08,4;UBERON:0003102,8.37e-08,99;UBERON:0005795,2.35e-07,22;UBERON:0000165,7.76e-07,29;UBERON:0000930,7.76e-07,29 | |||
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|short_description=p1@CDSN | |||
}} |
Revision as of 20:08, 13 September 2013
Short description: | p1@CDSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CDSN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000376288, uc003nsm.1_5end |
EntrezGene: | CDSN |
HGNC: | 1802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.12e-23 | 19 |
acinar cell | 8.28e-19 | 5 |
protein secreting cell | 1.27e-15 | 6 |
placental epithelial cell | 8.81e-13 | 3 |
general ecto-epithelial cell | 2.60e-12 | 14 |
chorionic membrane mesenchymal stem cell | 7.82e-12 | 3 |
acinar cell of salivary gland | 7.82e-12 | 3 |
gingival epithelial cell | 1.35e-11 | 3 |
epidermal cell | 1.67e-10 | 9 |
glandular epithelial cell | 2.63e-10 | 9 |
amniotic epithelial cell | 7.29e-09 | 2 |
sebum secreting cell | 1.07e-08 | 2 |
epithelial cell of sweat gland | 1.07e-08 | 2 |
epithelial cell of skin gland | 1.07e-08 | 2 |
acinar cell of sebaceous gland | 1.07e-08 | 2 |
mammary gland epithelial cell | 1.25e-08 | 4 |
corneal epithelial cell | 3.25e-08 | 2 |
amnion mesenchymal stem cell | 7.15e-08 | 5 |
CD1a-positive Langerhans cell | 7.99e-08 | 2 |
immature CD1a-positive Langerhans cell | 7.99e-08 | 2 |
keratinocyte | 1.78e-07 | 5 |
ecto-epithelial cell | 2.53e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.78e-38 | 14 |
membranous layer | 8.78e-38 | 14 |
chorion | 3.15e-26 | 7 |
extraembryonic structure | 1.72e-24 | 24 |
placenta | 3.76e-16 | 4 |
allantois | 3.76e-16 | 4 |
amnion | 3.42e-14 | 7 |
somatic layer of lateral plate mesoderm | 2.27e-12 | 8 |
egg chorion | 7.82e-12 | 3 |
gingival epithelium | 1.35e-11 | 3 |
organ component layer | 1.54e-09 | 66 |
oral opening | 1.99e-09 | 22 |
skin gland | 1.07e-08 | 2 |
epidermis gland | 1.07e-08 | 2 |
gland of integumental system | 1.07e-08 | 2 |
sebaceous gland | 1.07e-08 | 2 |
skin sebaceous gland | 1.07e-08 | 2 |
sweat gland | 1.07e-08 | 2 |
sweat gland placode | 1.07e-08 | 2 |
sebaceous gland placode | 1.07e-08 | 2 |
skin epidermis | 1.08e-08 | 15 |
outer epithelium | 1.08e-08 | 15 |
enveloping layer of ectoderm | 1.08e-08 | 15 |
mammary gland | 1.25e-08 | 4 |
mammary bud | 1.25e-08 | 4 |
mammary ridge | 1.25e-08 | 4 |
mammary placode | 1.25e-08 | 4 |
surface structure | 8.37e-08 | 99 |
embryonic uterus | 2.35e-07 | 22 |
mouth | 7.76e-07 | 29 |
stomodeum | 7.76e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.89e-15 | 4 |
breast cancer | 4.89e-15 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.