FFCP PHASE1:Hg19::chr20:34894247..34894279,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22839|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24476|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000373913_5end|coexpression_cluster_id=C3|description=CAGE_peak_4_at_DLGAP4_5end|id=chr20:34894247..34894279,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002321;2.57e-07;15!CL:0000333;5.32e-07;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.24e-22;82!UBERON:0006215;1.07e-07;3|ontology_enrichment_disease=DOID:3095!8.09e-08!22;DOID:2994!8.09e-08!22|ontology_enrichment_disease_v019=DOID:171;1.89e-09;10!DOID:169;1.24e-08;6|ontology_enrichment_disease_v019_2=DOID:171,1.57e-09,10;DOID:169,9.90e-09,6|ontology_enrichment_uberon=UBERON:0001049!4.94e-57!57;UBERON:0005068!4.94e-57!57;UBERON:0006241!4.94e-57!57;UBERON:0007135!4.94e-57!57;UBERON:0000073!9.79e-56!94;UBERON:0001016!9.79e-56!94;UBERON:0001017!4.46e-55!82;UBERON:0005743!1.64e-53!86;UBERON:0002616!1.55e-47!59;UBERON:0002780!1.30e-45!41;UBERON:0001890!1.30e-45!41;UBERON:0006240!1.30e-45!41;UBERON:0000955!2.12e-45!69;UBERON:0006238!2.12e-45!69;UBERON:0003080!3.37e-44!42;UBERON:0002346!1.34e-41!90;UBERON:0003075!6.84e-41!86;UBERON:0007284!6.84e-41!86;UBERON:0007023!5.55e-39!115;UBERON:0001893!8.23e-37!34;UBERON:0002020!1.28e-36!34;UBERON:0003528!1.28e-36!34;UBERON:0002791!2.03e-35!33;UBERON:0001869!1.70e-34!32;UBERON:0002619!1.60e-29!22;UBERON:0003056!2.59e-29!61;UBERON:0000924!2.66e-29!173;UBERON:0006601!2.66e-29!173;UBERON:0004121!2.42e-28!169;UBERON:0001950!7.51e-27!20;UBERON:0000956!3.96e-25!25;UBERON:0000203!3.96e-25!25;UBERON:0000033!9.05e-22!123;UBERON:0000153!6.42e-20!129;UBERON:0007811!6.42e-20!129;UBERON:0003076!1.60e-13!15;UBERON:0003057!1.60e-13!15;UBERON:0002420!1.70e-13!9;UBERON:0007245!1.70e-13!9;UBERON:0010009!1.70e-13!9;UBERON:0010011!1.70e-13!9;UBERON:0000454!1.70e-13!9;UBERON:0002308!5.03e-13!9;UBERON:0000125!5.03e-13!9;UBERON:0004732!2.46e-11!13;UBERON:0000025!4.65e-11!194;UBERON:0009663!1.04e-10!7;UBERON:0004733!2.21e-10!12;UBERON:0002028!2.21e-10!12;UBERON:0007277!2.21e-10!12;UBERON:0001894!4.06e-10!7;UBERON:0006222!4.06e-10!7;UBERON:0000200!9.33e-10!6;UBERON:0001871!1.99e-09!7;UBERON:0000349!1.64e-08!5;UBERON:0002021!2.44e-08!5;UBERON:0001872!3.16e-08!5;UBERON:0002298!3.16e-08!8;UBERON:0000922!9.30e-08!612;UBERON:0004111!2.51e-07!241;UBERON:0000369!2.58e-07!4;UBERON:0002435!2.58e-07!4;UBERON:0000204!2.58e-07!4;UBERON:0010082!2.58e-07!4;UBERON:0000064!2.71e-07!219;UBERON:0002680!3.95e-07!9;UBERON:0001895!3.95e-07!9;UBERON:0010092!3.95e-07!9|ontology_enrichment_uberon_v019=UBERON:0002780;4.61e-52;41!UBERON:0001890;4.61e-52;41!UBERON:0001893;3.19e-50;34!UBERON:0003528;1.42e-49;34!UBERON:0002020;1.42e-49;34!UBERON:0001869;2.34e-49;32!UBERON:0002791;4.56e-49;32!UBERON:0000073;1.31e-48;53!UBERON:0002616;1.31e-48;53!UBERON:0002619;1.42e-46;22!UBERON:0001950;2.73e-42;20!UBERON:0000956;2.25e-40;25!UBERON:0000203;2.25e-40;25!UBERON:0000955;2.63e-33;68!UBERON:0001017;3.91e-33;75!UBERON:0001016;1.19e-30;83!UBERON:0002420;1.33e-20;9!UBERON:0007245;1.33e-20;9!UBERON:0010009;1.33e-20;9!UBERON:0010011;1.33e-20;9!UBERON:0000454;1.33e-20;9!UBERON:0000125;7.44e-20;9!UBERON:0002308;7.44e-20;9!UBERON:0009663;3.70e-16;7!UBERON:0001894;3.79e-15;7!UBERON:0004732;5.11e-15;13!UBERON:0000200;1.32e-14;6!UBERON:0007023;1.89e-14;114!UBERON:0004733;1.59e-13;12!UBERON:0002028;1.59e-13;12!UBERON:0002298;1.12e-12;6!UBERON:0000349;1.25e-12;5!UBERON:0002021;2.26e-12;5!UBERON:0001871;2.46e-12;6!UBERON:0001872;3.37e-12;5!UBERON:0011216;2.11e-11;132!UBERON:0000369;9.96e-11;4!UBERON:0002435;9.96e-11;4!UBERON:0000204;9.96e-11;4!UBERON:0002784;1.22e-09;4!UBERON:0003296;4.90e-09;4!UBERON:0010133;4.90e-09;4!UBERON:0002680;1.44e-08;9!UBERON:0001895;1.44e-08;9!UBERON:0005383;1.94e-08;3!UBERON:0005382;1.94e-08;3!UBERON:0001870;3.30e-08;3!UBERON:0000988;3.05e-07;3!UBERON:0010314;4.11e-07;132!UBERON:0001896;4.36e-07;3!UBERON:0005290;4.36e-07;3!UBERON:0000013;5.32e-07;5!UBERON:0002410;5.32e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.45e-91,56;UBERON:0005068,3.45e-91,56;UBERON:0006241,3.45e-91,56;UBERON:0007135,3.45e-91,56;UBERON:0000073,1.28e-85,53;UBERON:0002616,1.28e-85,53;UBERON:0001016,7.46e-85,89;UBERON:0001017,2.03e-80,81;UBERON:0002780,2.67e-73,41;UBERON:0001890,2.67e-73,41;UBERON:0003080,2.67e-73,41;UBERON:0006240,2.67e-73,41;UBERON:0000955,1.83e-72,68;UBERON:0006238,1.83e-72,68;UBERON:0002346,2.23e-64,86;UBERON:0003075,7.46e-63,82;UBERON:0007284,7.46e-63,82;UBERON:0001893,3.76e-59,34;UBERON:0003528,7.65e-59,34;UBERON:0002020,7.65e-59,34;UBERON:0001869,1.97e-55,32;UBERON:0002791,5.41e-55,32;UBERON:0003056,7.98e-51,61;UBERON:0002619,1.46e-46,22;UBERON:0010371,1.97e-46,104;UBERON:0007023,1.59e-43,114;UBERON:0004121,1.49e-42,171;UBERON:0000924,1.49e-42,171;UBERON:0006601,1.49e-42,171;UBERON:0001950,2.81e-42,20;UBERON:0000956,2.31e-40,25;UBERON:0000203,2.31e-40,25;UBERON:0010314,3.46e-35,132;UBERON:0011216,1.02e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22839 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24476 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000373913_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_DLGAP4_5end | |||
|id=chr20:34894247..34894279,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002321;2.57e-07;15!CL:0000333;5.32e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.24e-22;82!UBERON:0006215;1.07e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!8.09e-08!22;DOID:2994!8.09e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;1.89e-09;10!DOID:169;1.24e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.57e-09,10;DOID:169,9.90e-09,6 | |||
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|short_description=p4@DLGAP4 | |||
}} |
Revision as of 08:17, 12 September 2013
Short description: | p4@DLGAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DLGAP4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000373913_5end |
EntrezGene: | DLGAP4 |
HGNC: | 24476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.57e-09 | 10 |
neuroendocrine tumor | 9.90e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.