FFCP PHASE1:Hg19::chr2:134024392..134024406,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C24|description=CAGE_peak_at_chr2:134024392..134024406,-|id=chr2:134024392..134024406,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000487;2.99e-12;2!CL:0002564;5.44e-08;3|ontology_enrichment_celltype_v019_2=CL:1000487,2.68e-12,2;CL:0002564,9.93e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:171!2.72e-09!10|ontology_enrichment_disease_v019=DOID:3307;4.06e-12;2!DOID:171;2.73e-09;10!DOID:3095;1.10e-08;22!DOID:2994;1.10e-08;22!DOID:3112;4.18e-07;1|ontology_enrichment_disease_v019_2=DOID:3307,3.55e-12,2;DOID:171,2.73e-09,10;DOID:3095,1.06e-08,22;DOID:2994,1.06e-08,22;DOID:3112,4.18e-07,1|ontology_enrichment_uberon=UBERON:0000073!1.31e-09!94;UBERON:0001016!1.31e-09!94;UBERON:0005743!8.62e-08!86;UBERON:0001017!9.01e-08!82;UBERON:0003296!5.64e-07!4;UBERON:0010133!5.64e-07!4;UBERON:0000468!8.51e-07!659|ontology_enrichment_uberon_v019=UBERON:0002346;1.72e-13;4!UBERON:0000923;1.72e-13;4!UBERON:0010316;1.72e-13;4!UBERON:0005291;1.72e-13;4!UBERON:0003296;2.07e-13;4!UBERON:0010133;2.07e-13;4!UBERON:0001905;8.13e-13;2!UBERON:0002757;8.13e-13;2!UBERON:0010134;8.13e-13;2!UBERON:0005408;8.13e-13;2!UBERON:0001899;8.13e-13;2!UBERON:0002050;6.90e-11;5!UBERON:0005423;6.90e-11;5!UBERON:0011135;4.31e-10;5!UBERON:0002216;4.31e-10;5!UBERON:0011134;4.31e-10;5!UBERON:0002209;4.31e-10;5!UBERON:0002213;4.31e-10;5!UBERON:0007844;4.31e-10;5!UBERON:0011138;4.31e-10;5!UBERON:0001130;4.31e-10;5!UBERON:0001066;4.31e-10;5!UBERON:0001468;4.31e-10;5!UBERON:0002242;5.44e-08;3!UBERON:0001894;7.47e-08;7!UBERON:0002784;8.28e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.41e-13,4;UBERON:0010133,2.41e-13,4;UBERON:0001905,8.15e-13,2;UBERON:0002757,8.15e-13,2;UBERON:0010134,8.15e-13,2;UBERON:0005408,8.15e-13,2;UBERON:0001899,8.15e-13,2;UBERON:0011135,6.21e-10,5;UBERON:0002216,6.21e-10,5;UBERON:0011134,6.21e-10,5;UBERON:0002209,6.21e-10,5;UBERON:0002213,6.21e-10,5;UBERON:0005856,6.21e-10,5;UBERON:0005866,6.21e-10,5;UBERON:0005863,6.21e-10,5;UBERON:0007844,6.21e-10,5;UBERON:0011138,6.21e-10,5;UBERON:0001130,6.21e-10,5;UBERON:0001066,6.21e-10,5;UBERON:0001468,6.21e-10,5;UBERON:0001894,8.11e-08,7;UBERON:0006222,8.11e-08,7;UBERON:0002242,9.93e-08,3;UBERON:0003068,9.93e-08,3;UBERON:0002328,9.93e-08,3;UBERON:0004880,9.93e-08,3;UBERON:0002784,8.29e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,1.65698687863958,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0.37223371266318,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,0,0,0,0,0.36807447515742,1.00034104211935,1.08506009479894,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,2.59349831675173,2.68670320712054,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0.779160935160341,0,2.74463030566391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,1.74962768029953,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,1.16107597546902,2.19267951258557,1.39596276990456,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr2:134024392..134024406,- | |||
|id=chr2:134024392..134024406,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000487;2.99e-12;2!CL:0002564;5.44e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,2.68e-12,2;CL:0002564,9.93e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.72e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:3307;4.06e-12;2!DOID:171;2.73e-09;10!DOID:3095;1.10e-08;22!DOID:2994;1.10e-08;22!DOID:3112;4.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.55e-12,2;DOID:171,2.73e-09,10;DOID:3095,1.06e-08,22;DOID:2994,1.06e-08,22;DOID:3112,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.31e-09!94;UBERON:0001016!1.31e-09!94;UBERON:0005743!8.62e-08!86;UBERON:0001017!9.01e-08!82;UBERON:0003296!5.64e-07!4;UBERON:0010133!5.64e-07!4;UBERON:0000468!8.51e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.72e-13;4!UBERON:0000923;1.72e-13;4!UBERON:0010316;1.72e-13;4!UBERON:0005291;1.72e-13;4!UBERON:0003296;2.07e-13;4!UBERON:0010133;2.07e-13;4!UBERON:0001905;8.13e-13;2!UBERON:0002757;8.13e-13;2!UBERON:0010134;8.13e-13;2!UBERON:0005408;8.13e-13;2!UBERON:0001899;8.13e-13;2!UBERON:0002050;6.90e-11;5!UBERON:0005423;6.90e-11;5!UBERON:0011135;4.31e-10;5!UBERON:0002216;4.31e-10;5!UBERON:0011134;4.31e-10;5!UBERON:0002209;4.31e-10;5!UBERON:0002213;4.31e-10;5!UBERON:0007844;4.31e-10;5!UBERON:0011138;4.31e-10;5!UBERON:0001130;4.31e-10;5!UBERON:0001066;4.31e-10;5!UBERON:0001468;4.31e-10;5!UBERON:0002242;5.44e-08;3!UBERON:0001894;7.47e-08;7!UBERON:0002784;8.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.41e-13,4;UBERON:0010133,2.41e-13,4;UBERON:0001905,8.15e-13,2;UBERON:0002757,8.15e-13,2;UBERON:0010134,8.15e-13,2;UBERON:0005408,8.15e-13,2;UBERON:0001899,8.15e-13,2;UBERON:0011135,6.21e-10,5;UBERON:0002216,6.21e-10,5;UBERON:0011134,6.21e-10,5;UBERON:0002209,6.21e-10,5;UBERON:0002213,6.21e-10,5;UBERON:0005856,6.21e-10,5;UBERON:0005866,6.21e-10,5;UBERON:0005863,6.21e-10,5;UBERON:0007844,6.21e-10,5;UBERON:0011138,6.21e-10,5;UBERON:0001130,6.21e-10,5;UBERON:0001066,6.21e-10,5;UBERON:0001468,6.21e-10,5;UBERON:0001894,8.11e-08,7;UBERON:0006222,8.11e-08,7;UBERON:0002242,9.93e-08,3;UBERON:0003068,9.93e-08,3;UBERON:0002328,9.93e-08,3;UBERON:0004880,9.93e-08,3;UBERON:0002784,8.29e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,1.65698687863958,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0.37223371266318,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,0,0,0,0,0.36807447515742,1.00034104211935,1.08506009479894,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0.78494864019923,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,2.59349831675173,2.68670320712054,0,1.10273068709225,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0.779160935160341,0,2.74463030566391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,1.74962768029953,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,1.16107597546902,2.19267951258557,1.39596276990456,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.262272940674991,0,0.537862017998534,0.383830394638891,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0.573409195690071,0.110929051536852,0.310482014706917,18.1236711766462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08698024724694,0,0,0,0.727394636810238,0.107410557042488,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83757976783418,0,0,0,0,0,2.20172318598255,0.327628914576042,0.33946505990805,6.1646726829488,3.96594445628807,0.558644917973244,0,0,0,0,5.2061731150044,0,0,0.478901577171454,0,1.51243017733031,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,4.09429793775242,0,0,0,0,0,0,0,0.992422356778588,2.63806866539431,0,24.1065826145229,28.5841163886,1.21393120847326,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.857718530119876,1.73814972905999,0,0,1.60342272946051,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0.439762066981716,0,0.0771741581079447,0,0,0,0.707029641304878,0,0.297046400327086,2.113278637917,0.339854229375634,0,0,0,0,0,0,0,0,0,0.631086248772738,0,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0.784923038064294,0,0,0,0,0.134704106029175,0,0,0.244209805832924,0,9.653614114347,0.898252021065869,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr2:134024392..134024406,- | |||
}} |
Revision as of 13:32, 12 September 2013
Short description: | p@chr2:134024392..134024406, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:134024392..134024406, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 2.68e-12 | 2 |
nucleus pulposus cell of intervertebral disc | 9.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.41e-13 | 4 |
neuroendocrine gland | 2.41e-13 | 4 |
pineal body | 8.15e-13 | 2 |
regional part of epithalamus | 8.15e-13 | 2 |
secretory circumventricular organ | 8.15e-13 | 2 |
circumventricular organ | 8.15e-13 | 2 |
epithalamus | 8.15e-13 | 2 |
intervertebral cartilage | 6.21e-10 | 5 |
symphysis | 6.21e-10 | 5 |
nonsynovial joint | 6.21e-10 | 5 |
fibrous joint | 6.21e-10 | 5 |
cartilaginous joint | 6.21e-10 | 5 |
developing mesenchymal condensation | 6.21e-10 | 5 |
pre-cartilage condensation | 6.21e-10 | 5 |
cartilaginous condensation | 6.21e-10 | 5 |
cartilage element | 6.21e-10 | 5 |
post-cranial axial skeletal system | 6.21e-10 | 5 |
vertebral column | 6.21e-10 | 5 |
intervertebral disk | 6.21e-10 | 5 |
intervertebral joint | 6.21e-10 | 5 |
diencephalon | 8.11e-08 | 7 |
future diencephalon | 8.11e-08 | 7 |
nucleus pulposus | 9.93e-08 | 3 |
axial mesoderm | 9.93e-08 | 3 |
notochord | 9.93e-08 | 3 |
chordamesoderm | 9.93e-08 | 3 |
regional part of diencephalon | 8.29e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.55e-12 | 2 |
neuroectodermal tumor | 2.73e-09 | 10 |
germ cell and embryonal cancer | 1.06e-08 | 22 |
germ cell cancer | 1.06e-08 | 22 |
papillary adenocarcinoma | 4.18e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.