FFCP PHASE1:Hg19::chr2:96012397..96012417,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30818|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15523|TSSclassifier=S|UniProt=Q9Y2W7|association_with_transcript=-58bp_to_ENST00000468529_5end|coexpression_cluster_id=C4253|description=CAGE_peak_3_at_KCNIP3_5end|id=chr2:96012397..96012417,+|ontology_enrichment_celltype=CL:0000057!1.20e-14!75;CL:0000055!1.38e-14!180;CL:0002620!7.84e-12!23|ontology_enrichment_celltype_v019=CL:0002620;3.24e-14;23!CL:0002552;4.20e-12;5!CL:0000057;1.75e-09;73!CL:0002559;2.07e-08;5!CL:0002551;2.33e-08;6!CL:0000148;4.59e-08;10!CL:1000507;5.83e-08;10!CL:1000494;5.83e-08;10!CL:0000239;8.90e-08;3!CL:1000615;8.90e-08;3!CL:0002306;8.90e-08;3!CL:0002577;8.87e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.93e-14,76;CL:0002620,2.02e-14,23;CL:0002552,4.11e-12,5;CL:0002551,1.31e-08,6;CL:0002559,2.14e-08,5;CL:0000148,4.69e-08,10;CL:0000541,4.69e-08,10;CL:1000507,6.33e-08,10;CL:1000494,6.33e-08,10;CL:0000239,8.67e-08,3;CL:1000615,8.67e-08,3;CL:0002306,8.67e-08,3;CL:0002577,7.03e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.83e-11!95;UBERON:0000475!2.96e-10!365;UBERON:0002199!8.13e-10!45;UBERON:0002416!8.13e-10!45;UBERON:0002097!1.37e-09!40;UBERON:0000468!2.17e-08!659;UBERON:0000062!1.59e-07!511|ontology_enrichment_uberon_v019=UBERON:0002097;5.20e-11;41!UBERON:0002067;6.05e-11;9!UBERON:0002073;2.07e-08;5!UBERON:0004211;5.83e-08;10!UBERON:0009773;5.83e-08;10!UBERON:0001231;5.83e-08;10!UBERON:0004810;5.83e-08;10!UBERON:0000075;6.00e-08;16!UBERON:0006853;8.90e-08;3!UBERON:0007685;8.90e-08;3!UBERON:0004134;8.90e-08;3!UBERON:0002199;1.20e-07;46!UBERON:0002416;1.20e-07;46!UBERON:0011135;1.32e-07;5!UBERON:0002216;1.32e-07;5!UBERON:0011134;1.32e-07;5!UBERON:0002209;1.32e-07;5!UBERON:0002213;1.32e-07;5!UBERON:0007844;1.32e-07;5!UBERON:0011138;1.32e-07;5!UBERON:0001130;1.32e-07;5!UBERON:0001066;1.32e-07;5!UBERON:0001468;1.32e-07;5!UBERON:0003102;1.33e-07;50!UBERON:0001828;2.38e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.17e-14,41;UBERON:0002199,6.18e-12,46;UBERON:0002416,6.18e-12,46;UBERON:0002067,3.59e-11,9;UBERON:0004016,3.59e-11,9;UBERON:0010083,3.59e-11,9;UBERON:0003102,1.04e-10,99;UBERON:0002073,2.14e-08,5;UBERON:0005086,2.14e-08,5;UBERON:0004810,6.33e-08,10;UBERON:0000075,7.15e-08,16;UBERON:0006853,8.67e-08,3;UBERON:0007685,8.67e-08,3;UBERON:0004134,8.67e-08,3;UBERON:0011135,1.98e-07,5;UBERON:0002216,1.98e-07,5;UBERON:0011134,1.98e-07,5;UBERON:0002209,1.98e-07,5;UBERON:0002213,1.98e-07,5;UBERON:0005856,1.98e-07,5;UBERON:0005866,1.98e-07,5;UBERON:0005863,1.98e-07,5;UBERON:0007844,1.98e-07,5;UBERON:0011138,1.98e-07,5;UBERON:0001130,1.98e-07,5;UBERON:0001066,1.98e-07,5;UBERON:0001468,1.98e-07,5;UBERON:0001828,2.35e-07,8|phase1_expression=0.908391896352783,1.07050261945492,0.986680828671798,2.00146596706261,1.78784437770915,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.873765488520689,0.527533956456907,6.18831764800233,4.63956326019082,0,0,0,0.487932798790507,1.96993692922861,3.06001036866379,0.940364164434263,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.767175371061182,0,0,0.289693037921647,0,0.973269740605272,0.378139268656271,0.221729397462564,0.351339142772504,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,1.24484414159907,0.134710672069688,0.490385709340376,0,0,0.70296429550139,1.24864030732128,2.85235910772225,1.49448680551801,0.939475989150119,2.26622122115384,1.82586048712923,7.55370433643105,4.66770405784718,10.7458812422796,2.37600571456411,4.20353779773547,0,1.43723628363248,3.53505839303539,3.503318556415,12.190821081304,0.877955241761676,0.612975591598039,2.55404700141215,0.340296549480063,0.89694817844431,6.62027905337559,1.05965950579781,0.600182192168805,5.15262646192194,0.257640540045629,1.30281799432113,0.506328996723799,1.07180705677318,0.504867548488229,2.20919756741518,1.93975268182574,0,1.10827308050404,1.86516651541536,0,0,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,0,5.14592750554308,8.28809528114883,16.7172454091512,16.6032280784005,1.0647612003586,0.842923450390509,0.964044119533928,1.10293972732394,1.52515610864684,1.18635309555548,0.674156540800822,1.17732879075208,0.769494313892781,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,1.25381931783988,0,0.383382679165211,0,0,0,0,0,6.54028311209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171796,0,0.310298987585686,0.426467963801962,0.714193294391221,7.62149136064872,3.78655757204733,1.00918676322552,1.0820016907288,0.606351566874658,0,0,0.0673520530145875,0,0,0,0.853818767021724,0,0,0,0.733448665097199,0.406896178315738,0,0.805095174364105,0|short_description=p3@KCNIP3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=30818 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15523 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2W7 | |||
|association_with_transcript=-58bp_to_ENST00000468529_5end | |||
|coexpression_cluster_id=C4253 | |||
|description=CAGE_peak_3_at_KCNIP3_5end | |||
|id=chr2:96012397..96012417,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.20e-14!75;CL:0000055!1.38e-14!180;CL:0002620!7.84e-12!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.24e-14;23!CL:0002552;4.20e-12;5!CL:0000057;1.75e-09;73!CL:0002559;2.07e-08;5!CL:0002551;2.33e-08;6!CL:0000148;4.59e-08;10!CL:1000507;5.83e-08;10!CL:1000494;5.83e-08;10!CL:0000239;8.90e-08;3!CL:1000615;8.90e-08;3!CL:0002306;8.90e-08;3!CL:0002577;8.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.93e-14,76;CL:0002620,2.02e-14,23;CL:0002552,4.11e-12,5;CL:0002551,1.31e-08,6;CL:0002559,2.14e-08,5;CL:0000148,4.69e-08,10;CL:0000541,4.69e-08,10;CL:1000507,6.33e-08,10;CL:1000494,6.33e-08,10;CL:0000239,8.67e-08,3;CL:1000615,8.67e-08,3;CL:0002306,8.67e-08,3;CL:0002577,7.03e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.83e-11!95;UBERON:0000475!2.96e-10!365;UBERON:0002199!8.13e-10!45;UBERON:0002416!8.13e-10!45;UBERON:0002097!1.37e-09!40;UBERON:0000468!2.17e-08!659;UBERON:0000062!1.59e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.20e-11;41!UBERON:0002067;6.05e-11;9!UBERON:0002073;2.07e-08;5!UBERON:0004211;5.83e-08;10!UBERON:0009773;5.83e-08;10!UBERON:0001231;5.83e-08;10!UBERON:0004810;5.83e-08;10!UBERON:0000075;6.00e-08;16!UBERON:0006853;8.90e-08;3!UBERON:0007685;8.90e-08;3!UBERON:0004134;8.90e-08;3!UBERON:0002199;1.20e-07;46!UBERON:0002416;1.20e-07;46!UBERON:0011135;1.32e-07;5!UBERON:0002216;1.32e-07;5!UBERON:0011134;1.32e-07;5!UBERON:0002209;1.32e-07;5!UBERON:0002213;1.32e-07;5!UBERON:0007844;1.32e-07;5!UBERON:0011138;1.32e-07;5!UBERON:0001130;1.32e-07;5!UBERON:0001066;1.32e-07;5!UBERON:0001468;1.32e-07;5!UBERON:0003102;1.33e-07;50!UBERON:0001828;2.38e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.17e-14,41;UBERON:0002199,6.18e-12,46;UBERON:0002416,6.18e-12,46;UBERON:0002067,3.59e-11,9;UBERON:0004016,3.59e-11,9;UBERON:0010083,3.59e-11,9;UBERON:0003102,1.04e-10,99;UBERON:0002073,2.14e-08,5;UBERON:0005086,2.14e-08,5;UBERON:0004810,6.33e-08,10;UBERON:0000075,7.15e-08,16;UBERON:0006853,8.67e-08,3;UBERON:0007685,8.67e-08,3;UBERON:0004134,8.67e-08,3;UBERON:0011135,1.98e-07,5;UBERON:0002216,1.98e-07,5;UBERON:0011134,1.98e-07,5;UBERON:0002209,1.98e-07,5;UBERON:0002213,1.98e-07,5;UBERON:0005856,1.98e-07,5;UBERON:0005866,1.98e-07,5;UBERON:0005863,1.98e-07,5;UBERON:0007844,1.98e-07,5;UBERON:0011138,1.98e-07,5;UBERON:0001130,1.98e-07,5;UBERON:0001066,1.98e-07,5;UBERON:0001468,1.98e-07,5;UBERON:0001828,2.35e-07,8 | |||
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| |||
|short_description=p3@KCNIP3 | |||
}} |
Revision as of 20:14, 12 September 2013
Short description: | p3@KCNIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNIP3_5end |
Coexpression cluster: | C4253_Hair_Fibroblast_Melanocyte_Anulus_thymus_Cardiac_Renal |
Association with transcript: | -58bp_to_ENST00000468529_5end |
EntrezGene: | KCNIP3 |
HGNC: | 15523 |
UniProt: | Q9Y2W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.93e-14 | 76 |
skin fibroblast | 2.02e-14 | 23 |
fibroblast of gingiva | 4.11e-12 | 5 |
fibroblast of dermis | 1.31e-08 | 6 |
hair follicle cell | 2.14e-08 | 5 |
melanocyte | 4.69e-08 | 10 |
melanoblast | 4.69e-08 | 10 |
kidney tubule cell | 6.33e-08 | 10 |
nephron tubule epithelial cell | 6.33e-08 | 10 |
brush border epithelial cell | 8.67e-08 | 3 |
kidney cortex tubule cell | 8.67e-08 | 3 |
epithelial cell of proximal tubule | 8.67e-08 | 3 |
placental epithelial cell | 7.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.17e-14 | 41 |
integument | 6.18e-12 | 46 |
integumental system | 6.18e-12 | 46 |
dermis | 3.59e-11 | 9 |
dermatome | 3.59e-11 | 9 |
future dermis | 3.59e-11 | 9 |
surface structure | 1.04e-10 | 99 |
hair follicle | 2.14e-08 | 5 |
hair follicle placode | 2.14e-08 | 5 |
nephron tubule epithelium | 6.33e-08 | 10 |
subdivision of skeletal system | 7.15e-08 | 16 |
renal cortex tubule | 8.67e-08 | 3 |
region of nephron tubule | 8.67e-08 | 3 |
proximal tubule | 8.67e-08 | 3 |
intervertebral cartilage | 1.98e-07 | 5 |
symphysis | 1.98e-07 | 5 |
nonsynovial joint | 1.98e-07 | 5 |
fibrous joint | 1.98e-07 | 5 |
cartilaginous joint | 1.98e-07 | 5 |
developing mesenchymal condensation | 1.98e-07 | 5 |
pre-cartilage condensation | 1.98e-07 | 5 |
cartilaginous condensation | 1.98e-07 | 5 |
cartilage element | 1.98e-07 | 5 |
post-cranial axial skeletal system | 1.98e-07 | 5 |
vertebral column | 1.98e-07 | 5 |
intervertebral disk | 1.98e-07 | 5 |
intervertebral joint | 1.98e-07 | 5 |
gingiva | 2.35e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.