FFCP PHASE1:Hg19::chr2:21231237..21231246,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=603|TSSclassifier=N|UniProt=Q13789|association_with_transcript=269bp_to_X03324_5end|coexpression_cluster_id=C5|description=CAGE_peak_67_at_APOB_5end|id=chr2:21231237..21231246,-|ontology_enrichment_celltype=CL:0000181!1.26e-42!12;CL:0000417!1.26e-42!12;CL:0000668!1.26e-42!12;CL:0000414!1.26e-42!12;CL:0000412!1.26e-42!12;CL:0000182!1.26e-42!12;CL:0000223!1.70e-08!59|ontology_enrichment_celltype_v019=CL:0000182;3.22e-38;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.38e-38,12;CL:0000223,2.42e-08,58|ontology_enrichment_development_v019=UBERON:0004161;1.10e-23;11!UBERON:0009497;3.55e-20;13!UBERON:0001041;3.61e-09;30!UBERON:0003104;3.61e-09;31!CL:0000223;2.80e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.01e-47!19;UBERON:0006925!2.01e-47!19;UBERON:0008836!2.01e-47!19;UBERON:0008835!6.80e-41!22;UBERON:0003894!6.80e-41!22;UBERON:0009854!4.28e-39!23;UBERON:0007499!6.28e-36!25;UBERON:0009497!6.28e-36!25;UBERON:0000015!6.28e-36!25;UBERON:0002423!6.28e-36!25;UBERON:0006235!6.28e-36!25;UBERON:0004161!6.28e-36!25;UBERON:0005057!1.58e-34!26;UBERON:0009856!1.58e-34!26;UBERON:0002365!7.14e-29!31;UBERON:0002330!7.14e-29!31;UBERON:0002368!1.65e-25!35;UBERON:0000949!1.04e-19!45;UBERON:0003929!2.57e-16!54;UBERON:0005172!5.23e-16!55;UBERON:0005173!5.23e-16!55;UBERON:0002530!7.07e-15!59;UBERON:0004921!1.48e-14!129;UBERON:0004185!1.48e-14!129;UBERON:0002417!2.29e-14!61;UBERON:0000916!2.29e-14!61;UBERON:0001007!6.45e-12!155;UBERON:0001555!6.45e-12!155;UBERON:0007026!6.45e-12!155;UBERON:0004119!7.92e-11!169;UBERON:0000925!7.92e-11!169;UBERON:0006595!7.92e-11!169;UBERON:0005911!1.66e-10!82;UBERON:0002108!4.24e-09!14;UBERON:0001041!1.15e-08!98;UBERON:0000160!2.52e-08!27;UBERON:0005177!7.15e-08!107;UBERON:0009569!2.06e-07!113;UBERON:0002405!3.36e-07!115;UBERON:0003914!4.59e-07!118|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-53;19!UBERON:0006925;1.68e-53;19!UBERON:0002423;8.53e-41;25!UBERON:0002365;4.54e-33;31!UBERON:0002330;4.54e-33;31!UBERON:0002368;2.43e-27;33!UBERON:0000949;1.02e-20;43!UBERON:0005172;3.57e-13;52!UBERON:0005173;3.57e-13;52!UBERON:0002417;1.17e-11;58!UBERON:0000916;1.17e-11;58!UBERON:0002530;4.41e-11;57!UBERON:0002114;1.14e-10;2!UBERON:0001007;4.14e-10;81!UBERON:0002108;6.58e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-53,19;UBERON:0006925,1.61e-53,19;UBERON:0008836,1.61e-53,19;UBERON:0008835,2.66e-46,22;UBERON:0003894,2.66e-46,22;UBERON:0009854,2.60e-44,23;UBERON:0007499,8.24e-41,25;UBERON:0009497,8.24e-41,25;UBERON:0000015,8.24e-41,25;UBERON:0002423,8.24e-41,25;UBERON:0006235,8.24e-41,25;UBERON:0004161,8.24e-41,25;UBERON:0009856,2.92e-39,26;UBERON:0002365,5.21e-33,31;UBERON:0002330,5.21e-33,31;UBERON:0002368,2.73e-29,35;UBERON:0000949,7.09e-23,45;UBERON:0003929,3.99e-19,54;UBERON:0005172,3.99e-19,54;UBERON:0005173,3.99e-19,54;UBERON:0002530,1.56e-17,59;UBERON:0002417,3.02e-17,60;UBERON:0000916,3.02e-17,60;UBERON:0005911,1.07e-12,82;UBERON:0001041,5.57e-12,87;UBERON:0004921,7.31e-12,118;UBERON:0002114,1.20e-10,2;UBERON:0005177,2.38e-10,101;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0009569,2.37e-09,112;UBERON:0003914,5.86e-09,117;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0005256,1.35e-08,122;UBERON:0000490,4.16e-07,148;UBERON:0002108,6.77e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,3.9313088667105,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28471228690949,0.741742725430498,0.876246070104404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |||
|TSSclassifier=N | |||
|UniProt=Q13789 | |||
|association_with_transcript=269bp_to_X03324_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_67_at_APOB_5end | |||
|id=chr2:21231237..21231246,- | |||
|ontology_enrichment_celltype=CL:0000181!1.26e-42!12;CL:0000417!1.26e-42!12;CL:0000668!1.26e-42!12;CL:0000414!1.26e-42!12;CL:0000412!1.26e-42!12;CL:0000182!1.26e-42!12;CL:0000223!1.70e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.22e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.38e-38,12;CL:0000223,2.42e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.10e-23;11!UBERON:0009497;3.55e-20;13!UBERON:0001041;3.61e-09;30!UBERON:0003104;3.61e-09;31!CL:0000223;2.80e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.01e-47!19;UBERON:0006925!2.01e-47!19;UBERON:0008836!2.01e-47!19;UBERON:0008835!6.80e-41!22;UBERON:0003894!6.80e-41!22;UBERON:0009854!4.28e-39!23;UBERON:0007499!6.28e-36!25;UBERON:0009497!6.28e-36!25;UBERON:0000015!6.28e-36!25;UBERON:0002423!6.28e-36!25;UBERON:0006235!6.28e-36!25;UBERON:0004161!6.28e-36!25;UBERON:0005057!1.58e-34!26;UBERON:0009856!1.58e-34!26;UBERON:0002365!7.14e-29!31;UBERON:0002330!7.14e-29!31;UBERON:0002368!1.65e-25!35;UBERON:0000949!1.04e-19!45;UBERON:0003929!2.57e-16!54;UBERON:0005172!5.23e-16!55;UBERON:0005173!5.23e-16!55;UBERON:0002530!7.07e-15!59;UBERON:0004921!1.48e-14!129;UBERON:0004185!1.48e-14!129;UBERON:0002417!2.29e-14!61;UBERON:0000916!2.29e-14!61;UBERON:0001007!6.45e-12!155;UBERON:0001555!6.45e-12!155;UBERON:0007026!6.45e-12!155;UBERON:0004119!7.92e-11!169;UBERON:0000925!7.92e-11!169;UBERON:0006595!7.92e-11!169;UBERON:0005911!1.66e-10!82;UBERON:0002108!4.24e-09!14;UBERON:0001041!1.15e-08!98;UBERON:0000160!2.52e-08!27;UBERON:0005177!7.15e-08!107;UBERON:0009569!2.06e-07!113;UBERON:0002405!3.36e-07!115;UBERON:0003914!4.59e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-53;19!UBERON:0006925;1.68e-53;19!UBERON:0002423;8.53e-41;25!UBERON:0002365;4.54e-33;31!UBERON:0002330;4.54e-33;31!UBERON:0002368;2.43e-27;33!UBERON:0000949;1.02e-20;43!UBERON:0005172;3.57e-13;52!UBERON:0005173;3.57e-13;52!UBERON:0002417;1.17e-11;58!UBERON:0000916;1.17e-11;58!UBERON:0002530;4.41e-11;57!UBERON:0002114;1.14e-10;2!UBERON:0001007;4.14e-10;81!UBERON:0002108;6.58e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-53,19;UBERON:0006925,1.61e-53,19;UBERON:0008836,1.61e-53,19;UBERON:0008835,2.66e-46,22;UBERON:0003894,2.66e-46,22;UBERON:0009854,2.60e-44,23;UBERON:0007499,8.24e-41,25;UBERON:0009497,8.24e-41,25;UBERON:0000015,8.24e-41,25;UBERON:0002423,8.24e-41,25;UBERON:0006235,8.24e-41,25;UBERON:0004161,8.24e-41,25;UBERON:0009856,2.92e-39,26;UBERON:0002365,5.21e-33,31;UBERON:0002330,5.21e-33,31;UBERON:0002368,2.73e-29,35;UBERON:0000949,7.09e-23,45;UBERON:0003929,3.99e-19,54;UBERON:0005172,3.99e-19,54;UBERON:0005173,3.99e-19,54;UBERON:0002530,1.56e-17,59;UBERON:0002417,3.02e-17,60;UBERON:0000916,3.02e-17,60;UBERON:0005911,1.07e-12,82;UBERON:0001041,5.57e-12,87;UBERON:0004921,7.31e-12,118;UBERON:0002114,1.20e-10,2;UBERON:0005177,2.38e-10,101;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0009569,2.37e-09,112;UBERON:0003914,5.86e-09,117;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0005256,1.35e-08,122;UBERON:0000490,4.16e-07,148;UBERON:0002108,6.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,3.9313088667105,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28471228690949,0.741742725430498,0.876246070104404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63794020620548,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p67@APOB | |||
}} |
Revision as of 16:25, 12 September 2013
Short description: | p67@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_67_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 269bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.38e-38 | 12 |
endodermal cell | 2.42e-08 | 58 |
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