FFCP PHASE1:Hg19::chr19:42192156..42192171,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1087 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1819 | |||
|TSSclassifier=S | |||
|UniProt=Q14002,P40199 | |||
|association_with_transcript=27bp_to_ENST00000338196,ENST00000401731,ENST00000412062_5end | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_2_at_CEACAM7_5end | |||
|id=chr19:42192156..42192171,- | |||
|ontology_enrichment_celltype=CL:0002623!6.59e-12!3;CL:0000244!2.46e-09!4;CL:0000731!2.46e-09!4;CL:0000622!1.72e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.30e-19;1!UBERON:0009143;1.56e-19;1!UBERON:0008814;2.60e-10;2!UBERON:0010056;2.60e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!2.52e-19!11;UBERON:0001155!1.58e-15!9;UBERON:0004119!1.55e-14!169;UBERON:0000925!1.55e-14!169;UBERON:0006595!1.55e-14!169;UBERON:0000161!3.73e-14!35;UBERON:0004921!1.08e-13!129;UBERON:0004185!1.08e-13!129;UBERON:0001723!2.03e-12!3;UBERON:0001033!2.03e-12!3;UBERON:0010056!2.03e-12!3;UBERON:0000078!1.36e-11!18;UBERON:0001007!6.16e-11!155;UBERON:0001555!6.16e-11!155;UBERON:0007026!6.16e-11!155;UBERON:0001046!8.63e-11!19;UBERON:0001154!4.46e-10!1;UBERON:0001153!4.46e-10!1;UBERON:0002372!5.31e-10!1;UBERON:0001961!5.31e-10!1;UBERON:0001744!5.31e-10!1;UBERON:0001735!5.31e-10!1;UBERON:0000166!6.52e-10!21;UBERON:0000996!1.36e-09!1;UBERON:0000077!1.35e-08!130;UBERON:0001042!2.71e-08!10;UBERON:0009145!2.71e-08!10;UBERON:0004907!9.13e-08!5;UBERON:0000365!1.23e-07!5;UBERON:0006562!1.40e-07!11;UBERON:0000160!1.73e-07!27;UBERON:0000165!2.19e-07!28;UBERON:0000930!2.19e-07!28;UBERON:0000063!3.71e-07!97;UBERON:0007023!4.90e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;6.21e-25;3!UBERON:0001033;6.21e-25;3!UBERON:0001154;1.30e-19;1!UBERON:0001153;1.30e-19;1!UBERON:0009854;1.30e-19;1!UBERON:0002372;2.06e-19;1!UBERON:0001961;2.06e-19;1!UBERON:0001744;2.06e-19;1!UBERON:0001042;2.06e-19;1!UBERON:0001735;2.06e-19;1!UBERON:0001155;5.33e-19;9!UBERON:0000059;1.13e-15;11!UBERON:0000002;7.11e-13;6!UBERON:0001560;7.11e-13;6!UBERON:0004921;1.03e-12;33!UBERON:0006562;2.17e-10;2!UBERON:0003127;3.27e-10;2!UBERON:0000160;7.96e-10;17!UBERON:0005409;8.21e-08;22!UBERON:0001555;9.87e-08;54!UBERON:0001043;2.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.22e-25,3;UBERON:0001033,6.22e-25,3;UBERON:0010056,6.22e-25,3;UBERON:0001154,1.30e-19,1;UBERON:0001153,1.30e-19,1;UBERON:0001045,1.30e-19,1;UBERON:0002372,1.88e-19,1;UBERON:0001961,1.88e-19,1;UBERON:0001744,1.88e-19,1;UBERON:0001735,1.88e-19,1;UBERON:0001155,5.33e-19,9;UBERON:0001042,6.90e-17,10;UBERON:0009145,6.90e-17,10;UBERON:0000059,1.13e-15,11;UBERON:0006562,2.04e-15,11;UBERON:0000002,7.33e-13,6;UBERON:0001560,7.33e-13,6;UBERON:0003127,3.58e-10,2;UBERON:0000160,7.96e-10,17;UBERON:0004921,2.77e-09,118;UBERON:0001557,3.43e-09,19;UBERON:0004119,1.62e-08,160;UBERON:0000925,1.62e-08,160;UBERON:0006595,1.62e-08,160;UBERON:0000166,5.14e-08,22;UBERON:0001007,1.84e-07,145;UBERON:0001555,1.84e-07,145;UBERON:0007026,1.84e-07,145;UBERON:0007023,1.97e-07,114;UBERON:0001043,2.19e-07,3;UBERON:0009143,2.19e-07,3;UBERON:0005409,5.69e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.11736921252787,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,2.38545801361771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9052386215701,0.442287822516696,178.420802320619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07353869251362,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8303177226605,3.42233301085281,3.70436291580231,1.07583308089015,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@CEACAM7 | |||
}} |
Revision as of 20:50, 11 September 2013
Short description: | p2@CEACAM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CEACAM7_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 27bp_to_ENST00000338196, ENST00000401731, ENST00000412062_5end |
EntrezGene: | CEACAM7 |
HGNC: | 1819 |
UniProt: | Q14002P40199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.22e-25 | 3 |
gustatory system | 6.22e-25 | 3 |
future tongue | 6.22e-25 | 3 |
vermiform appendix | 1.30e-19 | 1 |
caecum | 1.30e-19 | 1 |
midgut | 1.30e-19 | 1 |
tonsil | 1.88e-19 | 1 |
mucosa-associated lymphoid tissue | 1.88e-19 | 1 |
lymphoid tissue | 1.88e-19 | 1 |
tonsillar ring | 1.88e-19 | 1 |
colon | 5.33e-19 | 9 |
chordate pharynx | 6.90e-17 | 10 |
pharyngeal region of foregut | 6.90e-17 | 10 |
large intestine | 1.13e-15 | 11 |
pharynx | 2.04e-15 | 11 |
uterine cervix | 7.33e-13 | 6 |
neck of organ | 7.33e-13 | 6 |
open tracheal system trachea | 3.58e-10 | 2 |
intestine | 7.96e-10 | 17 |
subdivision of digestive tract | 2.77e-09 | 118 |
upper respiratory tract | 3.43e-09 | 19 |
endoderm-derived structure | 1.62e-08 | 160 |
endoderm | 1.62e-08 | 160 |
presumptive endoderm | 1.62e-08 | 160 |
oral opening | 5.14e-08 | 22 |
digestive system | 1.84e-07 | 145 |
digestive tract | 1.84e-07 | 145 |
primitive gut | 1.84e-07 | 145 |
adult organism | 1.97e-07 | 114 |
esophagus | 2.19e-07 | 3 |
esophageal region | 2.19e-07 | 3 |
gastrointestinal system | 5.69e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.