FFCP PHASE1:Hg19::chr18:56296268..56296298,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115701|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20565|TSSclassifier=S|UniProt=Q86TB3|association_with_transcript=-79bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end|coexpression_cluster_id=C1057|description=CAGE_peak_7_at_ALPK2_5end|id=chr18:56296268..56296298,-|ontology_enrichment_celltype=CL:0000791!1.11e-12!18;CL:0000789!1.11e-12!18;CL:0002420!1.11e-12!18;CL:0002419!1.11e-12!18;CL:0000790!1.11e-12!18;CL:0000084!2.33e-10!25;CL:0000827!2.33e-10!25;CL:0000625!5.20e-09!11|ontology_enrichment_celltype_v019=CL:0000946;3.10e-08;1!CL:0000786;3.10e-08;1!CL:0002127;1.59e-07;1!CL:0000911;1.59e-07;1!CL:0000814;1.59e-07;1|ontology_enrichment_celltype_v019_2=CL:0000946,3.10e-08,1;CL:0000786,3.10e-08,1;CL:0000980,3.10e-08,1;CL:0002127,1.26e-07,1;CL:0000914,1.26e-07,1;CL:0000911,1.26e-07,1;CL:0000814,1.26e-07,1;CL:0002042,1.26e-07,1;CL:0002039,1.26e-07,1;CL:0002040,1.26e-07,1;CL:0002041,1.26e-07,1|ontology_enrichment_development_v019=UBERON:0005062;1.92e-15;4!UBERON:0007284;1.92e-15;4!UBERON:0004140;2.70e-08;1!UBERON:0010227;4.07e-08;1!UBERON:0010226;5.51e-08;1!UBERON:0000358;6.97e-08;1!UBERON:0006603;6.66e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1287;2.57e-15;4!DOID:114;1.95e-14;2!DOID:178;6.31e-08;1!DOID:326;6.31e-08;1!DOID:3978;6.31e-08;1!DOID:3394;6.31e-08;1!DOID:5844;6.31e-08;1!DOID:0050619;8.80e-08;1!DOID:1357;8.80e-08;1!DOID:2355;1.59e-07;1|ontology_enrichment_disease_v019_2=DOID:1287,2.45e-15,4;DOID:114,1.89e-14,2;DOID:178,6.10e-08,1;DOID:326,6.10e-08,1;DOID:3978,6.10e-08,1;DOID:3394,6.10e-08,1;DOID:5844,6.10e-08,1;DOID:0050619,8.51e-08,1;DOID:1357,8.51e-08,1;DOID:2355,1.54e-07,1|ontology_enrichment_uberon=UBERON:0003978!1.49e-08!3;UBERON:0009751!1.49e-08!3;UBERON:0000946!1.49e-08!3;UBERON:0002523!1.49e-08!3;UBERON:0005983!1.49e-08!3;UBERON:0002165!1.49e-08!3;UBERON:0002062!1.49e-08!3;UBERON:0007280!1.49e-08!3;UBERON:0004151!1.53e-08!3|ontology_enrichment_uberon_v019=UBERON:0003978;2.14e-20;3!UBERON:0000946;2.14e-20;3!UBERON:0004151;2.28e-20;3!UBERON:0007100;3.72e-20;25!UBERON:0002081;4.05e-14;2!UBERON:0002133;4.77e-14;2!UBERON:0000948;2.04e-10;22!UBERON:0002079;4.07e-08;1!UBERON:0002146;4.35e-08;1!UBERON:0005623;4.35e-08;1!UBERON:0002135;4.82e-08;1!UBERON:0001389;4.82e-08;1!UBERON:0000026;4.82e-08;1!UBERON:0008784;4.82e-08;1!UBERON:0006058;4.82e-08;1!UBERON:0003663;4.82e-08;1!UBERON:0004256;4.82e-08;1!UBERON:0004708;4.82e-08;1!UBERON:0002101;4.82e-08;1!UBERON:0004709;4.82e-08;1!UBERON:0002529;4.82e-08;1!UBERON:0010538;4.82e-08;1!UBERON:0003661;4.82e-08;1!UBERON:0010890;4.82e-08;1!UBERON:0002471;4.82e-08;1!UBERON:0001383;4.82e-08;1!UBERON:0010758;4.82e-08;1!UBERON:0010707;4.82e-08;1!UBERON:0000978;4.82e-08;1!UBERON:0002103;4.82e-08;1!UBERON:0001665;4.82e-08;1!UBERON:0003823;4.82e-08;1!UBERON:0000154;4.82e-08;1!UBERON:0010709;4.82e-08;1!UBERON:0002084;5.51e-08;1!UBERON:0002082;5.51e-08;1!UBERON:0001764;8.80e-08;1!UBERON:0001825;8.80e-08;1!UBERON:0002134;1.07e-07;1!UBERON:0005208;1.07e-07;1!UBERON:0004145;1.07e-07;1!UBERON:0005946;1.07e-07;1!UBERON:0005965;1.07e-07;1!UBERON:0002078;1.07e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.28e-20,3;UBERON:0009751,2.28e-20,3;UBERON:0000946,2.28e-20,3;UBERON:0002523,2.28e-20,3;UBERON:0005983,2.28e-20,3;UBERON:0002165,2.28e-20,3;UBERON:0002062,2.28e-20,3;UBERON:0007280,2.28e-20,3;UBERON:0004151,2.44e-20,3;UBERON:0007100,1.50e-18,27;UBERON:0002081,4.47e-14,2;UBERON:0010227,4.47e-14,2;UBERON:0002133,5.10e-14,2;UBERON:0000948,1.69e-09,24;UBERON:0005498,1.69e-09,24;UBERON:0004140,1.69e-09,24;UBERON:0009881,1.69e-09,24;UBERON:0004141,1.69e-09,24;UBERON:0003084,1.69e-09,24;UBERON:0007005,1.69e-09,24;UBERON:0004139,1.69e-09,24;UBERON:0004291,1.69e-09,24;UBERON:0004797,4.99e-09,7;UBERON:0004177,9.08e-09,7;UBERON:0005057,9.08e-09,7;UBERON:0002079,4.07e-08,1;UBERON:0002146,4.35e-08,1;UBERON:0005623,4.35e-08,1;UBERON:0002135,4.66e-08,1;UBERON:0003103,4.97e-08,68;UBERON:0005418,4.99e-08,1;UBERON:0001389,4.99e-08,1;UBERON:0000026,4.99e-08,1;UBERON:0008784,4.99e-08,1;UBERON:0006058,4.99e-08,1;UBERON:0003663,4.99e-08,1;UBERON:0004256,4.99e-08,1;UBERON:0004708,4.99e-08,1;UBERON:0002101,4.99e-08,1;UBERON:0004709,4.99e-08,1;UBERON:0002529,4.99e-08,1;UBERON:0010538,4.99e-08,1;UBERON:0003661,4.99e-08,1;UBERON:0010890,4.99e-08,1;UBERON:0002471,4.99e-08,1;UBERON:0001383,4.99e-08,1;UBERON:0004357,4.99e-08,1;UBERON:0004347,4.99e-08,1;UBERON:0005420,4.99e-08,1;UBERON:0005732,4.99e-08,1;UBERON:0010758,4.99e-08,1;UBERON:0010707,4.99e-08,1;UBERON:0000978,4.99e-08,1;UBERON:0002103,4.99e-08,1;UBERON:0001665,4.99e-08,1;UBERON:0003823,4.99e-08,1;UBERON:0000154,4.99e-08,1;UBERON:0010709,4.99e-08,1;UBERON:0005733,4.99e-08,1;UBERON:0005730,4.99e-08,1;UBERON:0002084,5.33e-08,1;UBERON:0002082,5.33e-08,1;UBERON:0010226,5.33e-08,1;UBERON:0001764,8.51e-08,1;UBERON:0001825,8.51e-08,1;UBERON:0002134,1.18e-07,1;UBERON:0005208,1.18e-07,1;UBERON:0005946,1.18e-07,1;UBERON:0005965,1.18e-07,1;UBERON:0002078,1.18e-07,1;UBERON:0002370,3.03e-07,4;UBERON:0005058,3.03e-07,4;UBERON:0009113,3.03e-07,4;UBERON:0003295,3.03e-07,4;UBERON:0005562,3.03e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37450978193052,0.506039384039006,0,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0.821127996921047,0.80642697289893,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,25.2976482309876,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,1.32597682927218,0,0,0,0,0.429765441419957,0,16.1983792737907,19.2494756169814,2.15361907373044,10.5829870264465,30.9042754658331,13.3902874465124,51.059439089912,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0,0,2.86859742932552,0,20.0114691384543,13.9039313776741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0847354105286,0,0,0,0,0,0,4.24046059875633,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0.895260599125562,0,2.35898912783845,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,33.3026224036202,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62737995515375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1857209296974,10.3689434924809,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99588091474503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20192129160065,35.4755802832024,0,0,0,0,0,0,0,0,4.05144565611864,0,0.775066918032073,2.23468971465088,0,0,0,5.00748520163011,0,0.673520530145875,0.143444410785353,0.665320713092027,0,0,0,0,7.03922827210363,0,0,0,0.402547587182052,0|short_description=p7@ALPK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=S | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=-79bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |||
|coexpression_cluster_id=C1057 | |||
|description=CAGE_peak_7_at_ALPK2_5end | |||
|id=chr18:56296268..56296298,- | |||
|ontology_enrichment_celltype=CL:0000791!1.11e-12!18;CL:0000789!1.11e-12!18;CL:0002420!1.11e-12!18;CL:0002419!1.11e-12!18;CL:0000790!1.11e-12!18;CL:0000084!2.33e-10!25;CL:0000827!2.33e-10!25;CL:0000625!5.20e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000946;3.10e-08;1!CL:0000786;3.10e-08;1!CL:0002127;1.59e-07;1!CL:0000911;1.59e-07;1!CL:0000814;1.59e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.10e-08,1;CL:0000786,3.10e-08,1;CL:0000980,3.10e-08,1;CL:0002127,1.26e-07,1;CL:0000914,1.26e-07,1;CL:0000911,1.26e-07,1;CL:0000814,1.26e-07,1;CL:0002042,1.26e-07,1;CL:0002039,1.26e-07,1;CL:0002040,1.26e-07,1;CL:0002041,1.26e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.92e-15;4!UBERON:0007284;1.92e-15;4!UBERON:0004140;2.70e-08;1!UBERON:0010227;4.07e-08;1!UBERON:0010226;5.51e-08;1!UBERON:0000358;6.97e-08;1!UBERON:0006603;6.66e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1287;2.57e-15;4!DOID:114;1.95e-14;2!DOID:178;6.31e-08;1!DOID:326;6.31e-08;1!DOID:3978;6.31e-08;1!DOID:3394;6.31e-08;1!DOID:5844;6.31e-08;1!DOID:0050619;8.80e-08;1!DOID:1357;8.80e-08;1!DOID:2355;1.59e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1287,2.45e-15,4;DOID:114,1.89e-14,2;DOID:178,6.10e-08,1;DOID:326,6.10e-08,1;DOID:3978,6.10e-08,1;DOID:3394,6.10e-08,1;DOID:5844,6.10e-08,1;DOID:0050619,8.51e-08,1;DOID:1357,8.51e-08,1;DOID:2355,1.54e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.49e-08!3;UBERON:0009751!1.49e-08!3;UBERON:0000946!1.49e-08!3;UBERON:0002523!1.49e-08!3;UBERON:0005983!1.49e-08!3;UBERON:0002165!1.49e-08!3;UBERON:0002062!1.49e-08!3;UBERON:0007280!1.49e-08!3;UBERON:0004151!1.53e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.14e-20;3!UBERON:0000946;2.14e-20;3!UBERON:0004151;2.28e-20;3!UBERON:0007100;3.72e-20;25!UBERON:0002081;4.05e-14;2!UBERON:0002133;4.77e-14;2!UBERON:0000948;2.04e-10;22!UBERON:0002079;4.07e-08;1!UBERON:0002146;4.35e-08;1!UBERON:0005623;4.35e-08;1!UBERON:0002135;4.82e-08;1!UBERON:0001389;4.82e-08;1!UBERON:0000026;4.82e-08;1!UBERON:0008784;4.82e-08;1!UBERON:0006058;4.82e-08;1!UBERON:0003663;4.82e-08;1!UBERON:0004256;4.82e-08;1!UBERON:0004708;4.82e-08;1!UBERON:0002101;4.82e-08;1!UBERON:0004709;4.82e-08;1!UBERON:0002529;4.82e-08;1!UBERON:0010538;4.82e-08;1!UBERON:0003661;4.82e-08;1!UBERON:0010890;4.82e-08;1!UBERON:0002471;4.82e-08;1!UBERON:0001383;4.82e-08;1!UBERON:0010758;4.82e-08;1!UBERON:0010707;4.82e-08;1!UBERON:0000978;4.82e-08;1!UBERON:0002103;4.82e-08;1!UBERON:0001665;4.82e-08;1!UBERON:0003823;4.82e-08;1!UBERON:0000154;4.82e-08;1!UBERON:0010709;4.82e-08;1!UBERON:0002084;5.51e-08;1!UBERON:0002082;5.51e-08;1!UBERON:0001764;8.80e-08;1!UBERON:0001825;8.80e-08;1!UBERON:0002134;1.07e-07;1!UBERON:0005208;1.07e-07;1!UBERON:0004145;1.07e-07;1!UBERON:0005946;1.07e-07;1!UBERON:0005965;1.07e-07;1!UBERON:0002078;1.07e-07;1 | |||
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|short_description=p7@ALPK2 | |||
}} |
Revision as of 17:53, 11 September 2013
Short description: | p7@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | -79bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.10e-08 | 1 |
plasma cell | 3.10e-08 | 1 |
plasmablast | 3.10e-08 | 1 |
innate effector T cell | 1.26e-07 | 1 |
immature NK T cell | 1.26e-07 | 1 |
effector T cell | 1.26e-07 | 1 |
mature NK T cell | 1.26e-07 | 1 |
immature NK T cell stage IV | 1.26e-07 | 1 |
immature NK T cell stage I | 1.26e-07 | 1 |
immature NK T cell stage II | 1.26e-07 | 1 |
immature NK T cell stage III | 1.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 2.45e-15 | 4 |
heart disease | 1.89e-14 | 2 |
vascular disease | 6.10e-08 | 1 |
ischemia | 6.10e-08 | 1 |
extrinsic cardiomyopathy | 6.10e-08 | 1 |
myocardial ischemia | 6.10e-08 | 1 |
myocardial infarction | 6.10e-08 | 1 |
paranasal sinus cancer | 8.51e-08 | 1 |
maxillary sinus cancer | 8.51e-08 | 1 |
anemia | 1.54e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.