FFCP PHASE1:Hg19::chr17:79359173..79359188,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C327|description=CAGE_peak_at_chr17:79359173..79359188,-|id=chr17:79359173..79359188,-|ontology_enrichment_celltype=CL:0000148!2.77e-15!10;CL:0000541!2.77e-15!10;CL:0000147!1.40e-10!14;CL:0002567!1.47e-10!3;CL:0000710!4.62e-07!20|ontology_enrichment_celltype_v019=CL:0000148;1.95e-18;10!CL:0000147;7.32e-13;14!CL:0002567;1.69e-12;3!CL:0000710;1.11e-08;20|ontology_enrichment_celltype_v019_2=CL:0000148,1.95e-18,10;CL:0000541,1.95e-18,10;CL:0000147,7.33e-13,14;CL:0002567,1.76e-12,3;CL:0000710,1.11e-08,20|ontology_enrichment_development_v019=UBERON:0006601;1.03e-19;82!UBERON:0006241;4.02e-11;3!UBERON:0003057;4.02e-11;3!UBERON:0010122;8.41e-09;2|ontology_enrichment_disease=DOID:1909!3.94e-07!2|ontology_enrichment_disease_v019=DOID:1909;2.91e-08;2|ontology_enrichment_disease_v019_2=DOID:1909,2.51e-08,2|ontology_enrichment_uberon=UBERON:0001049!1.36e-83!57;UBERON:0005068!1.36e-83!57;UBERON:0006241!1.36e-83!57;UBERON:0007135!1.36e-83!57;UBERON:0002616!8.92e-69!59;UBERON:0001017!4.57e-66!82;UBERON:0005743!1.25e-65!86;UBERON:0002780!1.09e-63!41;UBERON:0001890!1.09e-63!41;UBERON:0006240!1.09e-63!41;UBERON:0003075!2.78e-63!86;UBERON:0007284!2.78e-63!86;UBERON:0000955!5.59e-63!69;UBERON:0006238!5.59e-63!69;UBERON:0001893!1.21e-62!34;UBERON:0002020!1.46e-62!34;UBERON:0003528!1.46e-62!34;UBERON:0003080!5.28e-62!42;UBERON:0000073!2.09e-61!94;UBERON:0001016!2.09e-61!94;UBERON:0002791!4.38e-60!33;UBERON:0002346!5.57e-60!90;UBERON:0007023!1.20e-59!115;UBERON:0001869!9.77e-57!32;UBERON:0003056!3.02e-43!61;UBERON:0002619!3.02e-43!22;UBERON:0001950!1.17e-37!20;UBERON:0000956!1.18e-37!25;UBERON:0000203!1.18e-37!25;UBERON:0000033!5.48e-35!123;UBERON:0000153!1.33e-34!129;UBERON:0007811!1.33e-34!129;UBERON:0004121!3.73e-34!169;UBERON:0000924!4.30e-33!173;UBERON:0006601!4.30e-33!173;UBERON:0002308!9.86e-28!9;UBERON:0000125!9.86e-28!9;UBERON:0002420!1.26e-27!9;UBERON:0007245!1.26e-27!9;UBERON:0010009!1.26e-27!9;UBERON:0010011!1.26e-27!9;UBERON:0000454!1.26e-27!9;UBERON:0009663!3.44e-22!7;UBERON:0003076!1.51e-21!15;UBERON:0003057!1.51e-21!15;UBERON:0000025!2.34e-19!194;UBERON:0001871!4.53e-18!7;UBERON:0002298!5.43e-18!8;UBERON:0004732!3.92e-17!13;UBERON:0000349!8.28e-16!5;UBERON:0004733!1.29e-14!12;UBERON:0002028!1.29e-14!12;UBERON:0007277!1.29e-14!12;UBERON:0004111!1.73e-13!241;UBERON:0000369!3.58e-13!4;UBERON:0002435!3.58e-13!4;UBERON:0000204!3.58e-13!4;UBERON:0010082!3.58e-13!4;UBERON:0000064!8.51e-13!219;UBERON:0000200!1.09e-12!6;UBERON:0000483!1.72e-12!309;UBERON:0000119!2.94e-12!312;UBERON:0000477!5.76e-12!286;UBERON:0005383!2.74e-10!3;UBERON:0005382!2.74e-10!3;UBERON:0006331!3.11e-10!3;UBERON:0002771!3.74e-10!3;UBERON:0001872!6.26e-10!5;UBERON:0002021!7.92e-10!5;UBERON:0000988!8.27e-10!3;UBERON:0001896!1.19e-09!3;UBERON:0005290!1.19e-09!3;UBERON:0010096!1.19e-09!3;UBERON:0002240!2.42e-09!3;UBERON:0000475!6.97e-09!365;UBERON:0002680!5.15e-08!9;UBERON:0001895!5.15e-08!9;UBERON:0010092!5.15e-08!9;UBERON:0001875!9.26e-08!2;UBERON:0006514!9.26e-08!2;UBERON:0005162!9.56e-08!2;UBERON:0000122!9.56e-08!2;UBERON:0001897!1.28e-07!2;UBERON:0001873!1.59e-07!2;UBERON:0010122!1.59e-07!2;UBERON:0001954!1.81e-07!2;UBERON:0003022!1.81e-07!2;UBERON:0002421!1.81e-07!2;UBERON:0002600!1.81e-07!2;UBERON:0002148!3.08e-07!2;UBERON:0009662!3.08e-07!2;UBERON:0001876!3.94e-07!2|ontology_enrichment_uberon_v019=UBERON:0001893;1.56e-56;34!UBERON:0003528;6.37e-54;34!UBERON:0002020;6.37e-54;34!UBERON:0002791;2.40e-52;32!UBERON:0001869;5.32e-52;32!UBERON:0002780;5.56e-49;41!UBERON:0001890;5.56e-49;41!UBERON:0000073;8.71e-45;53!UBERON:0002616;8.71e-45;53!UBERON:0002619;3.98e-42;22!UBERON:0000956;8.95e-37;25!UBERON:0000203;8.95e-37;25!UBERON:0001950;9.63e-36;20!UBERON:0000125;2.47e-33;9!UBERON:0002308;2.47e-33;9!UBERON:0001017;5.63e-30;75!UBERON:0000955;6.17e-29;68!UBERON:0002420;8.93e-27;9!UBERON:0007245;8.93e-27;9!UBERON:0010009;8.93e-27;9!UBERON:0010011;8.93e-27;9!UBERON:0000454;8.93e-27;9!UBERON:0009663;1.44e-26;7!UBERON:0001016;5.71e-23;83!UBERON:0002298;2.31e-21;6!UBERON:0004732;1.23e-16;13!UBERON:0007023;1.32e-15;114!UBERON:0000369;1.41e-15;4!UBERON:0002435;1.41e-15;4!UBERON:0000204;1.41e-15;4!UBERON:0000200;4.39e-15;6!UBERON:0004733;8.15e-14;12!UBERON:0002028;8.15e-14;12!UBERON:0000349;1.05e-12;5!UBERON:0005383;4.36e-12;3!UBERON:0005382;4.36e-12;3!UBERON:0001872;9.23e-12;5!UBERON:0002021;1.21e-11;5!UBERON:0000988;1.31e-11;3!UBERON:0001896;1.72e-11;3!UBERON:0005290;1.72e-11;3!UBERON:0002240;4.02e-11;3!UBERON:0005174;4.02e-11;3!UBERON:0001137;4.02e-11;3!UBERON:0011216;3.46e-10;132!UBERON:0001875;4.27e-09;2!UBERON:0006514;4.27e-09;2!UBERON:0005162;5.19e-09;2!UBERON:0000122;5.19e-09;2!UBERON:0001897;6.30e-09;2!UBERON:0010225;6.30e-09;2!UBERON:0001871;6.58e-09;6!UBERON:0001873;8.41e-09;2!UBERON:0001954;1.26e-08;2!UBERON:0003022;1.26e-08;2!UBERON:0002421;1.26e-08;2!UBERON:0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr17:79359173..79359188,- | |||
|id=chr17:79359173..79359188,- | |||
|ontology_enrichment_celltype=CL:0000148!2.77e-15!10;CL:0000541!2.77e-15!10;CL:0000147!1.40e-10!14;CL:0002567!1.47e-10!3;CL:0000710!4.62e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.95e-18;10!CL:0000147;7.32e-13;14!CL:0002567;1.69e-12;3!CL:0000710;1.11e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.95e-18,10;CL:0000541,1.95e-18,10;CL:0000147,7.33e-13,14;CL:0002567,1.76e-12,3;CL:0000710,1.11e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-19;82!UBERON:0006241;4.02e-11;3!UBERON:0003057;4.02e-11;3!UBERON:0010122;8.41e-09;2 | |||
|ontology_enrichment_disease=DOID:1909!3.94e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.91e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.51e-08,2 | |||
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|short_description=p@chr17:79359173..79359188,- | |||
}} |
Revision as of 16:24, 11 September 2013
Short description: | p@chr17:79359173..79359188, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79359173..79359188, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.95e-18 | 10 |
melanoblast | 1.95e-18 | 10 |
pigment cell | 7.33e-13 | 14 |
light melanocyte | 1.76e-12 | 3 |
neurecto-epithelial cell | 1.11e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.51e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.