FFCP PHASE1:Hg19::chr17:53344980..53345011,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4977|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_uc002iuh.2,uc010wni.1_5end|coexpression_cluster_id=C703|description=CAGE_peak_3_at_HLF_5end|id=chr17:53344980..53345011,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.66e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.62e-07,12|ontology_enrichment_development_v019=UBERON:0006601;4.93e-16;82!UBERON:0004161;1.14e-07;11!UBERON:0002532;1.95e-07;206!UBERON:0010316;1.95e-07;206!UBERON:0006241;2.00e-07;3!UBERON:0003057;2.00e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.97e-98!115;UBERON:0001049!2.81e-44!57;UBERON:0005068!2.81e-44!57;UBERON:0006241!2.81e-44!57;UBERON:0007135!2.81e-44!57;UBERON:0002616!1.16e-35!59;UBERON:0001017!1.41e-34!82;UBERON:0003075!3.02e-34!86;UBERON:0007284!3.02e-34!86;UBERON:0005743!4.16e-34!86;UBERON:0003080!5.42e-34!42;UBERON:0000955!1.72e-33!69;UBERON:0006238!1.72e-33!69;UBERON:0002780!1.01e-32!41;UBERON:0001890!1.01e-32!41;UBERON:0006240!1.01e-32!41;UBERON:0002346!5.07e-32!90;UBERON:0000073!4.31e-31!94;UBERON:0001016!4.31e-31!94;UBERON:0001893!8.28e-26!34;UBERON:0002020!4.52e-25!34;UBERON:0003528!4.52e-25!34;UBERON:0000153!1.67e-24!129;UBERON:0007811!1.67e-24!129;UBERON:0002791!1.91e-24!33;UBERON:0000033!2.85e-24!123;UBERON:0001869!3.90e-23!32;UBERON:0004121!3.59e-22!169;UBERON:0003056!6.52e-22!61;UBERON:0000924!3.12e-21!173;UBERON:0006601!3.12e-21!173;UBERON:0004111!1.18e-20!241;UBERON:0002619!5.53e-20!22;UBERON:0000477!7.58e-18!286;UBERON:0001950!9.44e-18!20;UBERON:0000956!5.13e-17!25;UBERON:0000203!5.13e-17!25;UBERON:0000025!9.77e-17!194;UBERON:0000062!1.49e-14!511;UBERON:0000481!1.09e-12!347;UBERON:0000475!1.23e-12!365;UBERON:0002298!2.66e-12!8;UBERON:0003076!3.63e-11!15;UBERON:0003057!3.63e-11!15;UBERON:0002420!8.38e-10!9;UBERON:0007245!8.38e-10!9;UBERON:0010009!8.38e-10!9;UBERON:0010011!8.38e-10!9;UBERON:0000454!8.38e-10!9;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0000483!2.48e-09!309;UBERON:0000119!4.55e-09!312;UBERON:0004732!7.92e-09!13;UBERON:0000922!1.11e-08!612;UBERON:0001894!2.03e-08!7;UBERON:0006222!2.03e-08!7;UBERON:0000467!2.25e-08!625;UBERON:0001871!2.35e-08!7;UBERON:0000480!2.58e-08!626;UBERON:0000923!3.29e-08!604;UBERON:0005291!3.29e-08!604;UBERON:0006598!3.29e-08!604;UBERON:0002532!3.29e-08!604;UBERON:0000468!3.43e-08!659;UBERON:0002050!3.78e-08!605;UBERON:0005423!3.78e-08!605;UBERON:0002530!5.87e-08!59;UBERON:0002365!7.52e-08!31;UBERON:0002330!7.52e-08!31;UBERON:0009663!1.13e-07!7;UBERON:0005174!1.36e-07!5;UBERON:0001137!1.36e-07!5;UBERON:0000349!1.36e-07!5;UBERON:0004733!1.73e-07!12;UBERON:0002028!1.73e-07!12;UBERON:0007277!1.73e-07!12;UBERON:0003296!3.12e-07!4;UBERON:0010133!3.12e-07!4|ontology_enrichment_uberon_v019=UBERON:0007023;4.24e-21;114!UBERON:0000073;2.31e-20;53!UBERON:0002616;2.31e-20;53!UBERON:0002780;1.70e-19;41!UBERON:0001890;1.70e-19;41!UBERON:0001893;1.39e-14;34!UBERON:0002619;2.57e-13;22!UBERON:0001869;4.36e-13;32!UBERON:0002791;5.28e-13;32!UBERON:0001017;8.13e-13;75!UBERON:0001950;1.01e-12;20!UBERON:0003528;1.02e-12;34!UBERON:0002020;1.02e-12;34!UBERON:0000955;1.21e-12;68!UBERON:0001016;1.36e-11;83!UBERON:0000956;2.05e-11;25!UBERON:0000203;2.05e-11;25!UBERON:0001894;3.23e-11;7!UBERON:0004732;7.40e-10;13!UBERON:0002298;1.51e-09;6!UBERON:0003296;2.18e-09;4!UBERON:0010133;2.18e-09;4!UBERON:0002365;1.39e-08;31!UBERON:0002330;1.39e-08;31!UBERON:0004733;3.95e-08;12!UBERON:0002028;3.95e-08;12!UBERON:0001896;1.00e-07;3!UBERON:0005290;1.00e-07;3!UBERON:0002240;2.00e-07;3!UBERON:0005174;2.00e-07;3!UBERON:0001137;2.00e-07;3!UBERON:0002107;2.46e-07;19!UBERON:0006925;2.46e-07;19!UBERON:0002021;3.15e-07;5!UBERON:0011216;3.66e-07;132!UBERON:0002368;3.66e-07;33!UBERON:0006947;4.45e-07;3!UBERON:0004054;4.45e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.21e-83,114;UBERON:0001049,2.12e-38,56;UBERON:0005068,2.12e-38,56;UBERON:0006241,2.12e-38,56;UBERON:0007135,2.12e-38,56;UBERON:0000073,1.80e-33,53;UBERON:0002616,1.80e-33,53;UBERON:0001017,2.26e-32,81;UBERON:0003075,2.99e-30,82;UBERON:0007284,2.99e-30,82;UBERON:0001016,6.00e-30,89;UBERON:0000955,2.13e-29,68;UBERON:0006238,2.13e-29,68;UBERON:0002346,2.43e-28,86;UBERON:0002780,1.85e-26,41;UBERON:0001890,1.85e-26,41;UBERON:0003080,1.85e-26,41;UBERON:0006240,1.85e-26,41;UBERON:0011216,5.73e-26,223;UBERON:0010371,6.57e-23,104;UBERON:0010314,3.54e-19,132;UBERON:0003056,4.74e-19,61;UBERON:0004121,9.28e-19,171;UBERON:0000924,9.28e-19,171;UBERON:0006601,9.28e-19,171;UBERON:0001893,4.65e-18,34;UBERON:0004111,5.19e-18,240;UBERON:0000025,9.55e-16,192;UBERON:0003528,1.14e-15,34;UBERON:0002020,1.14e-15,34;UBERON:0001869,3.94e-15,32;UBERON:0002791,4.64e-15,32;UBERON:0002619,2.53e-13,22;UBERON:0003076,5.57e-13,15;UBERON:0003057,5.57e-13,15;UBERON:0001950,1.12e-12,20;UBERON:0000956,2.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4977 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_uc002iuh.2,uc010wni.1_5end | |||
|coexpression_cluster_id=C703 | |||
|description=CAGE_peak_3_at_HLF_5end | |||
|id=chr17:53344980..53345011,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.62e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.93e-16;82!UBERON:0004161;1.14e-07;11!UBERON:0002532;1.95e-07;206!UBERON:0010316;1.95e-07;206!UBERON:0006241;2.00e-07;3!UBERON:0003057;2.00e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-98!115;UBERON:0001049!2.81e-44!57;UBERON:0005068!2.81e-44!57;UBERON:0006241!2.81e-44!57;UBERON:0007135!2.81e-44!57;UBERON:0002616!1.16e-35!59;UBERON:0001017!1.41e-34!82;UBERON:0003075!3.02e-34!86;UBERON:0007284!3.02e-34!86;UBERON:0005743!4.16e-34!86;UBERON:0003080!5.42e-34!42;UBERON:0000955!1.72e-33!69;UBERON:0006238!1.72e-33!69;UBERON:0002780!1.01e-32!41;UBERON:0001890!1.01e-32!41;UBERON:0006240!1.01e-32!41;UBERON:0002346!5.07e-32!90;UBERON:0000073!4.31e-31!94;UBERON:0001016!4.31e-31!94;UBERON:0001893!8.28e-26!34;UBERON:0002020!4.52e-25!34;UBERON:0003528!4.52e-25!34;UBERON:0000153!1.67e-24!129;UBERON:0007811!1.67e-24!129;UBERON:0002791!1.91e-24!33;UBERON:0000033!2.85e-24!123;UBERON:0001869!3.90e-23!32;UBERON:0004121!3.59e-22!169;UBERON:0003056!6.52e-22!61;UBERON:0000924!3.12e-21!173;UBERON:0006601!3.12e-21!173;UBERON:0004111!1.18e-20!241;UBERON:0002619!5.53e-20!22;UBERON:0000477!7.58e-18!286;UBERON:0001950!9.44e-18!20;UBERON:0000956!5.13e-17!25;UBERON:0000203!5.13e-17!25;UBERON:0000025!9.77e-17!194;UBERON:0000062!1.49e-14!511;UBERON:0000481!1.09e-12!347;UBERON:0000475!1.23e-12!365;UBERON:0002298!2.66e-12!8;UBERON:0003076!3.63e-11!15;UBERON:0003057!3.63e-11!15;UBERON:0002420!8.38e-10!9;UBERON:0007245!8.38e-10!9;UBERON:0010009!8.38e-10!9;UBERON:0010011!8.38e-10!9;UBERON:0000454!8.38e-10!9;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0000483!2.48e-09!309;UBERON:0000119!4.55e-09!312;UBERON:0004732!7.92e-09!13;UBERON:0000922!1.11e-08!612;UBERON:0001894!2.03e-08!7;UBERON:0006222!2.03e-08!7;UBERON:0000467!2.25e-08!625;UBERON:0001871!2.35e-08!7;UBERON:0000480!2.58e-08!626;UBERON:0000923!3.29e-08!604;UBERON:0005291!3.29e-08!604;UBERON:0006598!3.29e-08!604;UBERON:0002532!3.29e-08!604;UBERON:0000468!3.43e-08!659;UBERON:0002050!3.78e-08!605;UBERON:0005423!3.78e-08!605;UBERON:0002530!5.87e-08!59;UBERON:0002365!7.52e-08!31;UBERON:0002330!7.52e-08!31;UBERON:0009663!1.13e-07!7;UBERON:0005174!1.36e-07!5;UBERON:0001137!1.36e-07!5;UBERON:0000349!1.36e-07!5;UBERON:0004733!1.73e-07!12;UBERON:0002028!1.73e-07!12;UBERON:0007277!1.73e-07!12;UBERON:0003296!3.12e-07!4;UBERON:0010133!3.12e-07!4 | |||
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|short_description=p3@HLF | |||
}} |
Revision as of 14:39, 11 September 2013
Short description: | p3@HLF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HLF_5end |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | 4bp_to_uc002iuh.2, uc010wni.1_5end |
EntrezGene: | HLF |
HGNC: | 4977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.62e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.