FFCP PHASE1:Hg19::chr17:26890583..26890593,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C889|description=CAGE_peak_at_chr17:26890583..26890593,-|id=chr17:26890583..26890593,-|ontology_enrichment_celltype=CL:0002586!1.65e-10!3;CL:0002504!4.94e-09!3;CL:1000279!4.94e-09!3;CL:1000280!4.94e-09!3;CL:0000149!5.87e-08!4;CL:0000077!4.34e-07!19;CL:0002195!6.45e-07!2;CL:0002571!6.45e-07!2;CL:0002588!9.71e-07!2|ontology_enrichment_celltype_v019=CL:0002586;2.87e-30;3!CL:0000149;5.43e-23;4!CL:0002097;1.65e-12;2!CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:0000174;8.96e-09;3!CL:0000632;1.26e-08;3!CL:0000147;2.90e-07;14!CL:0000669;8.85e-07;4!CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4|ontology_enrichment_celltype_v019_2=CL:0002586,1.98e-30,3;CL:0000149,4.11e-23,4;CL:0002097,1.65e-12,2;CL:0000650,3.24e-12,2;CL:1000500,3.24e-12,2;CL:1000618,3.24e-12,2;CL:1001318,3.24e-12,2;CL:0002173,3.24e-12,2;CL:0000174,8.96e-09,3;CL:0000632,1.12e-08,3;CL:0000147,2.68e-07,14;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4;CL:0000669,9.63e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.20e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!2.57e-15!9;UBERON:0001781!1.65e-10!3;UBERON:0001782!1.65e-10!3;UBERON:0005424!1.65e-10!3;UBERON:0001557!1.50e-08!19;UBERON:0003104!8.35e-08!238;UBERON:0009142!8.35e-08!238;UBERON:0007625!5.65e-07!11;UBERON:0000481!8.01e-07!347|ontology_enrichment_uberon_v019=UBERON:0001781;2.87e-30;3!UBERON:0001782;2.87e-30;3!UBERON:0007625;1.17e-18;11!UBERON:0000966;1.29e-18;5!UBERON:0005388;1.29e-18;5!UBERON:0001802;1.29e-18;5!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0000019;4.22e-11;19!UBERON:0000047;4.22e-11;19!UBERON:0004088;4.22e-11;19!UBERON:0010230;4.22e-11;19!UBERON:0000970;1.40e-10;20!UBERON:0002104;4.17e-10;21!UBERON:0001456;4.17e-10;21!UBERON:0000020;2.78e-09;23!UBERON:0001032;6.39e-09;24!UBERON:0004456;6.39e-09;24!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0001851;7.52e-07;15!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0003891;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.98e-30,3;UBERON:0005424,1.98e-30,3;UBERON:0001781,4.11e-23,4;UBERON:0007625,1.04e-18,11;UBERON:0000966,9.04e-16,6;UBERON:0005388,9.04e-16,6;UBERON:0001802,9.04e-16,6;UBERON:0003567,3.24e-12,2;UBERON:0003838,3.24e-12,2;UBERON:0003586,3.24e-12,2;UBERON:0005169,3.24e-12,2;UBERON:0002321,3.24e-12,2;UBERON:0005215,3.24e-12,2;UBERON:0002303,3.24e-12,2;UBERON:0002319,3.24e-12,2;UBERON:0000019,1.31e-10,20;UBERON:0000047,1.31e-10,20;UBERON:0010312,1.31e-10,20;UBERON:0004088,1.31e-10,20;UBERON:0010230,1.31e-10,20;UBERON:0003072,1.31e-10,20;UBERON:0004128,1.31e-10,20;UBERON:0003071,1.31e-10,20;UBERON:0000970,3.92e-10,21;UBERON:0002104,3.92e-10,21;UBERON:0001456,1.06e-09,22;UBERON:0000020,6.05e-09,24;UBERON:0001032,6.05e-09,24;UBERON:0004456,6.05e-09,24;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0005085,4.67e-07,31;UBERON:0001851,7.86e-07,15;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4;UBERON:0003891,9.63e-07,4|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.441175890929576,0.653638332277218,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,2.0516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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C889 | |||
|description=CAGE_peak_at_chr17:26890583..26890593,- | |||
|id=chr17:26890583..26890593,- | |||
|ontology_enrichment_celltype=CL:0002586!1.65e-10!3;CL:0002504!4.94e-09!3;CL:1000279!4.94e-09!3;CL:1000280!4.94e-09!3;CL:0000149!5.87e-08!4;CL:0000077!4.34e-07!19;CL:0002195!6.45e-07!2;CL:0002571!6.45e-07!2;CL:0002588!9.71e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.87e-30;3!CL:0000149;5.43e-23;4!CL:0002097;1.65e-12;2!CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:0000174;8.96e-09;3!CL:0000632;1.26e-08;3!CL:0000147;2.90e-07;14!CL:0000669;8.85e-07;4!CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.98e-30,3;CL:0000149,4.11e-23,4;CL:0002097,1.65e-12,2;CL:0000650,3.24e-12,2;CL:1000500,3.24e-12,2;CL:1000618,3.24e-12,2;CL:1001318,3.24e-12,2;CL:0002173,3.24e-12,2;CL:0000174,8.96e-09,3;CL:0000632,1.12e-08,3;CL:0000147,2.68e-07,14;CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4;CL:0000669,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.20e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.57e-15!9;UBERON:0001781!1.65e-10!3;UBERON:0001782!1.65e-10!3;UBERON:0005424!1.65e-10!3;UBERON:0001557!1.50e-08!19;UBERON:0003104!8.35e-08!238;UBERON:0009142!8.35e-08!238;UBERON:0007625!5.65e-07!11;UBERON:0000481!8.01e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.87e-30;3!UBERON:0001782;2.87e-30;3!UBERON:0007625;1.17e-18;11!UBERON:0000966;1.29e-18;5!UBERON:0005388;1.29e-18;5!UBERON:0001802;1.29e-18;5!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0000019;4.22e-11;19!UBERON:0000047;4.22e-11;19!UBERON:0004088;4.22e-11;19!UBERON:0010230;4.22e-11;19!UBERON:0000970;1.40e-10;20!UBERON:0002104;4.17e-10;21!UBERON:0001456;4.17e-10;21!UBERON:0000020;2.78e-09;23!UBERON:0001032;6.39e-09;24!UBERON:0004456;6.39e-09;24!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0001851;7.52e-07;15!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0003891;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.98e-30,3;UBERON:0005424,1.98e-30,3;UBERON:0001781,4.11e-23,4;UBERON:0007625,1.04e-18,11;UBERON:0000966,9.04e-16,6;UBERON:0005388,9.04e-16,6;UBERON:0001802,9.04e-16,6;UBERON:0003567,3.24e-12,2;UBERON:0003838,3.24e-12,2;UBERON:0003586,3.24e-12,2;UBERON:0005169,3.24e-12,2;UBERON:0002321,3.24e-12,2;UBERON:0005215,3.24e-12,2;UBERON:0002303,3.24e-12,2;UBERON:0002319,3.24e-12,2;UBERON:0000019,1.31e-10,20;UBERON:0000047,1.31e-10,20;UBERON:0010312,1.31e-10,20;UBERON:0004088,1.31e-10,20;UBERON:0010230,1.31e-10,20;UBERON:0003072,1.31e-10,20;UBERON:0004128,1.31e-10,20;UBERON:0003071,1.31e-10,20;UBERON:0000970,3.92e-10,21;UBERON:0002104,3.92e-10,21;UBERON:0001456,1.06e-09,22;UBERON:0000020,6.05e-09,24;UBERON:0001032,6.05e-09,24;UBERON:0004456,6.05e-09,24;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0005085,4.67e-07,31;UBERON:0001851,7.86e-07,15;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4;UBERON:0003891,9.63e-07,4 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.482022059766964,0.441175890929576,0.653638332277218,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,2.05160100093111,1.64007322849853,0.650756789328606,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,1.3037684630641,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0.815425236441684,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,1.0027595760908,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36103978437314,0,0,0,0,0,0.926404341482917,0.438568099157414,0,0.192914038270915,0,0,16.5806564030975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:26890583..26890593,- | |||
}} |
Revision as of 12:45, 11 September 2013
Short description: | p@chr17:26890583..26890593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26890583..26890593, - |
Coexpression cluster: | C889_mesothelioma_mesodermal_lung_placenta_umbilical_Urothelial_Mallassezderived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.98e-30 | 3 |
visual pigment cell | 4.11e-23 | 4 |
cortical cell of adrenal gland | 1.65e-12 | 2 |
mesangial cell | 3.24e-12 | 2 |
kidney interstitial cell | 3.24e-12 | 2 |
juxtaglomerular complex cell | 3.24e-12 | 2 |
renal interstitial pericyte | 3.24e-12 | 2 |
extraglomerular mesangial cell | 3.24e-12 | 2 |
steroid hormone secreting cell | 8.96e-09 | 3 |
hepatic stellate cell | 1.12e-08 | 3 |
pigment cell | 2.68e-07 | 14 |
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |
pericyte cell | 9.63e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.