FFCP PHASE1:Hg19::chr16:81643958..81644004,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24319|TSSclassifier=S|UniProt=F5GWB5|association_with_transcript=46bp_to_ENST00000542097,uc010vnq.1_5end|description=CAGE_peak_6_at_CMIP_5end|id=chr16:81643958..81644004,+|ontology_enrichment_celltype=CL:0002139!1.65e-13!24;CL:0000115!9.68e-12!35;CL:0000071!1.71e-09!18;CL:0002546!1.71e-09!18;CL:0002078!1.49e-08!44;CL:1000413!3.79e-08!9|ontology_enrichment_celltype_v019=CL:0002139;5.54e-11;24!CL:0000115;1.29e-09;36!CL:0000071;2.51e-08;18!CL:1000413;2.07e-07;9|ontology_enrichment_celltype_v019_2=CL:0002139,5.75e-11,24;CL:0000115,1.02e-10,36;CL:0000071,2.39e-08,18;CL:0002546,2.39e-08,18;CL:0002078,1.36e-07,45;CL:1000413,1.92e-07,9|ontology_enrichment_development_v019=UBERON:0006601;1.01e-12;82!CL:0002546;2.51e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!8.49e-69!115;UBERON:0001049!9.19e-36!57;UBERON:0005068!9.19e-36!57;UBERON:0006241!9.19e-36!57;UBERON:0007135!9.19e-36!57;UBERON:0002616!4.87e-30!59;UBERON:0001017!4.72e-29!82;UBERON:0004111!6.82e-29!241;UBERON:0000025!7.69e-29!194;UBERON:0005743!9.59e-29!86;UBERON:0003080!2.04e-28!42;UBERON:0002780!1.58e-27!41;UBERON:0001890!1.58e-27!41;UBERON:0006240!1.58e-27!41;UBERON:0003075!4.72e-27!86;UBERON:0007284!4.72e-27!86;UBERON:0000955!1.00e-26!69;UBERON:0006238!1.00e-26!69;UBERON:0000073!2.34e-25!94;UBERON:0001016!2.34e-25!94;UBERON:0002346!6.52e-25!90;UBERON:0000477!4.50e-24!286;UBERON:0002020!3.42e-22!34;UBERON:0003528!3.42e-22!34;UBERON:0001893!5.20e-22!34;UBERON:0002791!4.38e-21!33;UBERON:0001869!4.28e-20!32;UBERON:0003056!6.46e-18!61;UBERON:0002619!5.84e-15!22;UBERON:0000483!9.68e-15!309;UBERON:0000119!2.81e-14!312;UBERON:0000956!1.73e-13!25;UBERON:0000203!1.73e-13!25;UBERON:0000033!2.87e-13!123;UBERON:0001950!2.90e-13!20;UBERON:0000153!4.77e-13!129;UBERON:0007811!4.77e-13!129;UBERON:0004872!6.67e-13!84;UBERON:0000468!7.21e-13!659;UBERON:0000467!3.23e-12!625;UBERON:0000480!4.11e-12!626;UBERON:0004121!1.67e-11!169;UBERON:0002308!6.20e-11!9;UBERON:0000125!6.20e-11!9;UBERON:0002420!8.20e-11!9;UBERON:0007245!8.20e-11!9;UBERON:0010009!8.20e-11!9;UBERON:0010011!8.20e-11!9;UBERON:0000454!8.20e-11!9;UBERON:0000924!8.85e-11!173;UBERON:0006601!8.85e-11!173;UBERON:0000055!9.56e-11!69;UBERON:0001009!5.71e-10!113;UBERON:0007100!7.71e-10!27;UBERON:0000475!1.23e-09!365;UBERON:0001986!1.71e-09!18;UBERON:0004638!1.71e-09!18;UBERON:0004852!1.71e-09!18;UBERON:0000064!3.31e-09!219;UBERON:0002298!3.71e-09!8;UBERON:0001981!8.65e-09!60;UBERON:0007500!8.65e-09!60;UBERON:0004537!8.65e-09!60;UBERON:0006965!8.65e-09!60;UBERON:0009663!8.90e-09!7;UBERON:0004535!9.83e-09!110;UBERON:0002049!1.55e-08!79;UBERON:0007798!1.55e-08!79;UBERON:0003076!1.74e-08!15;UBERON:0003057!1.74e-08!15;UBERON:0003915!3.79e-08!9;UBERON:0004700!3.79e-08!9;UBERON:0001917!3.79e-08!9;UBERON:0003103!4.93e-08!69;UBERON:0000948!6.11e-08!24;UBERON:0005498!6.11e-08!24;UBERON:0004140!6.11e-08!24;UBERON:0009881!6.11e-08!24;UBERON:0004141!6.11e-08!24;UBERON:0003084!6.11e-08!24;UBERON:0007005!6.11e-08!24;UBERON:0004139!6.11e-08!24;UBERON:0004291!6.11e-08!24;UBERON:0000062!6.50e-08!511;UBERON:0000487!7.09e-08!22;UBERON:0000200!1.38e-07!6;UBERON:0006914!2.53e-07!25;UBERON:0003914!3.81e-07!118;UBERON:0004732!4.57e-07!13;UBERON:0001894!5.34e-07!7;UBERON:0006222!5.34e-07!7|ontology_enrichment_uberon_v019=UBERON:0002780;8.10e-29;41!UBERON:0001890;8.10e-29;41!UBERON:0001893;6.58e-28;34!UBERON:0003528;2.34e-27;34!UBERON:0002020;2.34e-27;34!UBERON:0002791;2.88e-26;32!UBERON:0001869;2.97e-26;32!UBERON:0000073;2.15e-25;53!UBERON:0002616;2.15e-25;53!UBERON:0002619;1.02e-22;22!UBERON:0001950;3.81e-20;20!UBERON:0007023;1.14e-19;114!UBERON:0000956;2.18e-19;25!UBERON:0000203;2.18e-19;25!UBERON:0001017;1.21e-17;75!UBERON:0000955;4.17e-16;68!UBERON:0000125;1.12e-15;9!UBERON:0002308;1.12e-15;9!UBERON:0002420;1.72e-15;9!UBERON:0007245;1.72e-15;9!UBERON:0010009;1.72e-15;9!UBERON:0010011;1.72e-15;9!UBERON:0000454;1.72e-15;9!UBERON:0001016;7.39e-14;83!UBERON:0009663;1.81e-12;7!UBERON:0000200;8.77e-11;6!UBERON:0001894;4.72e-10;7!UBERON:0002298;4.98e-10;6!UBERON:0000349;1.14e-08;5!UBERON:0004638;2.51e-08;18!UBERON:0001986;2.51e-08;18!UBERON:0004852;2.51e-08;18!UBERON:0000369;1.06e-07;4!UBERON:0002435;1.06e-07;4!UBERON:0000204;1.06e-07;4!UBERON:0004732;2.02e-07;13!UBERON:0003915;2.07e-07;9!UBERON:0004700;2.07e-07;9!UBERON:0001917;2.07e-07;9!UBERON:0003688;8.57e-07;6!UBERON:0002358;8.57e-07;6!UBERON:0003684;8.57e-07;6!UBERON:0001178;8.57e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.27e-77,114;UBERON:0001049,7.93e-49,56;UBERON:0005068,7.93e-49,56;UBERON:0006241,7.93e-49,56;UBERON:0007135,7.93e-49,56;UBERON:0000073,7.28e-45,53;UBERON:0002616,7.28e-45,53;UBERON:0002780,1.03e-40,41;UBERON:0001890,1.03e-40,41;UBERON:0003080,1.03e-40,41;UBERON:0006240,1.03e-40,41;UBERON:0001017,6.75e-39,81;UBERON:0000955,6.03e-37,68;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24319 | |||
|TSSclassifier=S | |||
|UniProt=F5GWB5 | |||
|association_with_transcript=46bp_to_ENST00000542097,uc010vnq.1_5end | |||
|description=CAGE_peak_6_at_CMIP_5end | |||
|id=chr16:81643958..81644004,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.65e-13!24;CL:0000115!9.68e-12!35;CL:0000071!1.71e-09!18;CL:0002546!1.71e-09!18;CL:0002078!1.49e-08!44;CL:1000413!3.79e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.54e-11;24!CL:0000115;1.29e-09;36!CL:0000071;2.51e-08;18!CL:1000413;2.07e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.75e-11,24;CL:0000115,1.02e-10,36;CL:0000071,2.39e-08,18;CL:0002546,2.39e-08,18;CL:0002078,1.36e-07,45;CL:1000413,1.92e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.01e-12;82!CL:0002546;2.51e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p6@CMIP | |||
}} |
Revision as of 11:43, 11 September 2013
Short description: | p6@CMIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CMIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000542097, uc010vnq.1_5end |
EntrezGene: | CMIP |
HGNC: | 24319 |
UniProt: | F5GWB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.75e-11 | 24 |
endothelial cell | 1.02e-10 | 36 |
blood vessel endothelial cell | 2.39e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.39e-08 | 18 |
meso-epithelial cell | 1.36e-07 | 45 |
endothelial cell of artery | 1.92e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.