FFCP PHASE1:Hg19::chr16:58497281..58497330,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65009|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14466|TSSclassifier=W|UniProt=Q9ULP0|association_with_transcript=-218bp_to_NM_020465,uc002enk.2_5end|coexpression_cluster_id=C751|description=CAGE_peak_6_at_NDRG4_5end|id=chr16:58497281..58497330,+|ontology_enrichment_celltype=CL:0002139!3.54e-10!24;CL:0000115!1.62e-09!35;CL:0002078!3.94e-07!44;CL:0002322!7.46e-07!5;CL:0000071!9.44e-07!18;CL:0002546!9.44e-07!18|ontology_enrichment_celltype_v019=CL:0002322;2.68e-12;5!CL:0002321;3.50e-07;15|ontology_enrichment_celltype_v019_2=CL:0002322,2.36e-12,5|ontology_enrichment_development_v019=UBERON:0006601;4.83e-13;82!UBERON:0006215;7.31e-10;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;7.12e-07;2|ontology_enrichment_disease_v019_2=DOID:114,5.63e-07,2|ontology_enrichment_uberon=UBERON:0007023!1.76e-46!115;UBERON:0001049!5.88e-34!57;UBERON:0005068!5.88e-34!57;UBERON:0006241!5.88e-34!57;UBERON:0007135!5.88e-34!57;UBERON:0005743!2.64e-33!86;UBERON:0003075!4.56e-33!86;UBERON:0007284!4.56e-33!86;UBERON:0001017!1.33e-32!82;UBERON:0000073!3.90e-31!94;UBERON:0001016!3.90e-31!94;UBERON:0002346!1.01e-30!90;UBERON:0002616!1.18e-30!59;UBERON:0000955!3.16e-29!69;UBERON:0006238!3.16e-29!69;UBERON:0002780!3.16e-28!41;UBERON:0001890!3.16e-28!41;UBERON:0006240!3.16e-28!41;UBERON:0003080!2.83e-27!42;UBERON:0001893!1.10e-24!34;UBERON:0002020!1.44e-24!34;UBERON:0003528!1.44e-24!34;UBERON:0002619!2.45e-24!22;UBERON:0002791!1.68e-23!33;UBERON:0001869!3.52e-23!32;UBERON:0003056!2.96e-22!61;UBERON:0001950!5.81e-22!20;UBERON:0004111!3.25e-21!241;UBERON:0000153!6.89e-21!129;UBERON:0007811!6.89e-21!129;UBERON:0000956!1.39e-20!25;UBERON:0000203!1.39e-20!25;UBERON:0000025!5.67e-20!194;UBERON:0000033!1.44e-19!123;UBERON:0000477!4.44e-19!286;UBERON:0004121!1.34e-18!169;UBERON:0000924!1.13e-17!173;UBERON:0006601!1.13e-17!173;UBERON:0000483!1.38e-12!309;UBERON:0000119!3.25e-12!312;UBERON:0000468!1.08e-09!659;UBERON:0000064!4.44e-09!219;UBERON:0004733!9.19e-09!12;UBERON:0002028!9.19e-09!12;UBERON:0007277!9.19e-09!12;UBERON:0000200!2.68e-08!6;UBERON:0001871!3.22e-08!7;UBERON:0000467!4.84e-08!625;UBERON:0000922!4.93e-08!612;UBERON:0000480!5.74e-08!626;UBERON:0003076!6.88e-08!15;UBERON:0003057!6.88e-08!15;UBERON:0004732!6.88e-08!13;UBERON:0002298!9.76e-08!8;UBERON:0000349!2.45e-07!5;UBERON:0000481!3.22e-07!347;UBERON:0002021!7.01e-07!5;UBERON:0001872!7.10e-07!5;UBERON:0001986!9.44e-07!18;UBERON:0004638!9.44e-07!18;UBERON:0004852!9.44e-07!18|ontology_enrichment_uberon_v019=UBERON:0002619;6.24e-33;22!UBERON:0001869;1.94e-29;32!UBERON:0000956;1.48e-28;25!UBERON:0000203;1.48e-28;25!UBERON:0000073;1.73e-28;53!UBERON:0002616;1.73e-28;53!UBERON:0001950;1.95e-28;20!UBERON:0001893;6.55e-28;34!UBERON:0002780;7.52e-28;41!UBERON:0001890;7.52e-28;41!UBERON:0002791;7.82e-27;32!UBERON:0003528;5.90e-26;34!UBERON:0002020;5.90e-26;34!UBERON:0000955;2.31e-21;68!UBERON:0001017;1.13e-17;75!UBERON:0004733;1.90e-14;12!UBERON:0002028;1.90e-14;12!UBERON:0004732;3.28e-13;13!UBERON:0001871;3.77e-13;6!UBERON:0000349;3.85e-13;5!UBERON:0001016;1.78e-12;83!UBERON:0007023;2.81e-12;114!UBERON:0002298;6.88e-12;6!UBERON:0000200;4.61e-11;6!UBERON:0001894;1.74e-09;7!UBERON:0001896;4.00e-09;3!UBERON:0005290;4.00e-09;3!UBERON:0003978;9.34e-09;3!UBERON:0000946;9.34e-09;3!UBERON:0001872;2.01e-08;5!UBERON:0002680;3.72e-08;9!UBERON:0001895;3.72e-08;9!UBERON:0001905;4.21e-07;2!UBERON:0002757;4.21e-07;2!UBERON:0010134;4.21e-07;2!UBERON:0005408;4.21e-07;2!UBERON:0001899;4.21e-07;2!UBERON:0003296;5.49e-07;4!UBERON:0010133;5.49e-07;4!UBERON:0002784;5.49e-07;4!UBERON:0002420;7.16e-07;9!UBERON:0007245;7.16e-07;9!UBERON:0010009;7.16e-07;9!UBERON:0010011;7.16e-07;9!UBERON:0000454;7.16e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-52,53;UBERON:0002616,1.50e-52,53;UBERON:0001049,3.02e-49,56;UBERON:0005068,3.02e-49,56;UBERON:0006241,3.02e-49,56;UBERON:0007135,3.02e-49,56;UBERON:0000955,2.21e-43,68;UBERON:0006238,2.21e-43,68;UBERON:0007023,7.57e-43,114;UBERON:0003075,1.50e-39,82;UBERON:0007284,1.50e-39,82;UBERON:0002780,5.31e-39,41;UBERON:0001890,5.31e-39,41;UBERON:0003080,5.31e-39,41;UBERON:0006240,5.31e-39,41;UBERON:0002346,3.18e-37,86;UBERON:0001017,3.29e-37,81;UBERON:0001016,1.72e-36,89;UBERON:0002619,1.30e-33,22;UBERON:0001869,2.80e-33,32;UBERON:0001893,5.09e-31,34;UBERON:0003528,5.60e-31,34;UBERON:0002020,5.60e-31,34;UBERON:0010371,6.81e-31,104;UBERON:0002791,6.01e-30,32;UBERON:0000956,3.76e-29,25;UBERON:0000203,3.76e-29,25;UBERON:0001950,4.93e-29,20;UBERON:0003056,3.75e-26,61;UBERON:0010314,5.11e-25,132;UBERON:0004121,8.77e-20,171;UBERON:0000924,8.77e-20,171;UBERON:0006601,8.77e-20,171;UBERON:0000025,1.03e-19,192;UBERON:0004111,5.25e-18,240;UBERON:0004733,1.98e-14,12;UBERON:0002028,1.98e-14,12;UBERON:0007277,1.98e-14,12;UBERON:0000349,2.47e-13,5;UBERON:0004732,3.40e-13,13;UBERON:0001871,3.54e-13,6;UBERON:0011216,2.95e-12,223;UBERON:0002298,7.04e-12,6;UBERON:0003076,3.21e-11,15;UBERON:0003057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,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0.588925401344836,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,2.51568513706384,1.74540276136151,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,1.51557396436479,0.535928260312357,1.65833887891756,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0.435433495793923,0,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0,0|short_description=p6@NDRG4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=65009 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14466 | |||
|TSSclassifier=W | |||
|UniProt=Q9ULP0 | |||
|association_with_transcript=-218bp_to_NM_020465,uc002enk.2_5end | |||
|coexpression_cluster_id=C751 | |||
|description=CAGE_peak_6_at_NDRG4_5end | |||
|id=chr16:58497281..58497330,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.54e-10!24;CL:0000115!1.62e-09!35;CL:0002078!3.94e-07!44;CL:0002322!7.46e-07!5;CL:0000071!9.44e-07!18;CL:0002546!9.44e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.68e-12;5!CL:0002321;3.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.36e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.83e-13;82!UBERON:0006215;7.31e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.12e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.63e-07,2 | |||
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|short_description=p6@NDRG4 | |||
}} |
Revision as of 10:58, 11 September 2013
Short description: | p6@NDRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NDRG4_5end |
Coexpression cluster: | C751_heart_pineal_left_cerebellum_pons_putamen_Mesothelial |
Association with transcript: | -218bp_to_NM_020465, uc002enk.2_5end |
EntrezGene: | NDRG4 |
HGNC: | 14466 |
UniProt: | Q9ULP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.36e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.63e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.