FFCP PHASE1:Hg19::chr15:100879294..100879309,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=170691|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17109|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc002bvx.1_5end|coexpression_cluster_id=C141|description=CAGE_peak_4_at_ADAMTS17_5end|id=chr15:100879294..100879309,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002127;2.62e-23;1!CL:0000911;2.62e-23;1!CL:0000814;2.62e-23;1|ontology_enrichment_celltype_v019_2=CL:0002127,2.62e-23,1;CL:0000914,2.62e-23,1;CL:0000911,2.62e-23,1;CL:0000814,2.62e-23,1;CL:0002042,2.62e-23,1;CL:0002039,2.62e-23,1;CL:0002040,2.62e-23,1;CL:0002041,2.62e-23,1;CL:0000893,2.32e-12,2;CL:0002489,2.32e-12,2;CL:0000809,2.32e-12,2;CL:0000808,2.32e-12,2;CL:0000894,2.32e-12,2;CL:0000806,2.32e-12,2;CL:0000807,2.32e-12,2;CL:0000805,2.32e-12,2;CL:0002425,2.32e-12,2|ontology_enrichment_development_v019=CL:0002425;2.32e-12;2!UBERON:0010122;3.24e-12;2!UBERON:0006965;3.24e-12;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.50e-28!34;UBERON:0007023!2.22e-28!115;UBERON:0001869!8.17e-28!32;UBERON:0002780!1.26e-27!41;UBERON:0001890!1.26e-27!41;UBERON:0006240!1.26e-27!41;UBERON:0003080!7.93e-27!42;UBERON:0002791!8.14e-27!33;UBERON:0002020!7.10e-26!34;UBERON:0003528!7.10e-26!34;UBERON:0001049!7.52e-26!57;UBERON:0005068!7.52e-26!57;UBERON:0006241!7.52e-26!57;UBERON:0007135!7.52e-26!57;UBERON:0002619!6.55e-21!22;UBERON:0002616!1.10e-20!59;UBERON:0000956!1.42e-20!25;UBERON:0000203!1.42e-20!25;UBERON:0001950!6.07e-20!20;UBERON:0000955!9.88e-20!69;UBERON:0006238!9.88e-20!69;UBERON:0005743!8.41e-19!86;UBERON:0001017!1.77e-18!82;UBERON:0003056!2.39e-18!61;UBERON:0000073!2.77e-16!94;UBERON:0001016!2.77e-16!94;UBERON:0003075!4.14e-16!86;UBERON:0007284!4.14e-16!86;UBERON:0000153!3.44e-15!129;UBERON:0007811!3.44e-15!129;UBERON:0002346!4.59e-15!90;UBERON:0000033!9.70e-11!123;UBERON:0001871!1.24e-10!7;UBERON:0004177!4.98e-10!7;UBERON:0000200!2.42e-09!6;UBERON:0000025!1.20e-07!194;UBERON:0002771!1.75e-07!3;UBERON:0002370!3.14e-07!4;UBERON:0005058!3.14e-07!4;UBERON:0009113!3.14e-07!4;UBERON:0003295!3.14e-07!4;UBERON:0005562!3.14e-07!4;UBERON:0002420!4.77e-07!9;UBERON:0007245!4.77e-07!9;UBERON:0010009!4.77e-07!9;UBERON:0010011!4.77e-07!9;UBERON:0000454!4.77e-07!9;UBERON:0000974!8.64e-07!10;UBERON:0002308!8.82e-07!9;UBERON:0000125!8.82e-07!9|ontology_enrichment_uberon_v019=UBERON:0002370;6.25e-45;2!UBERON:0005058;6.25e-45;2!UBERON:0009113;6.25e-45;2!UBERON:0004177;1.13e-18;5!UBERON:0005057;1.13e-18;5!UBERON:0001873;3.24e-12;2!UBERON:0005383;1.40e-08;3!UBERON:0005382;1.40e-08;3!UBERON:0000369;9.63e-07;4!UBERON:0002435;9.63e-07;4!UBERON:0000204;9.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.37e-50,4;UBERON:0005058,4.37e-50,4;UBERON:0009113,4.37e-50,4;UBERON:0003295,4.37e-50,4;UBERON:0005562,4.37e-50,4;UBERON:0003351,1.05e-33,6;UBERON:0004177,5.13e-29,7;UBERON:0005057,5.13e-29,7;UBERON:0000974,1.47e-20,10;UBERON:0003408,1.47e-20,10;UBERON:0001042,1.47e-20,10;UBERON:0009145,1.47e-20,10;UBERON:0006562,9.20e-19,11;UBERON:0009722,9.20e-19,11;UBERON:0007690,9.20e-19,11;UBERON:0001873,2.90e-12,2;UBERON:0010122,2.90e-12,2;UBERON:0008814,9.59e-12,18;UBERON:0001557,3.67e-11,19;UBERON:0005383,1.30e-08,3;UBERON:0005382,1.30e-08,3;UBERON:0004807,9.00e-08,28;UBERON:0000077,1.59e-07,29;UBERON:0000369,9.11e-07,4;UBERON:0002435,9.11e-07,4;UBERON:0000204,9.11e-07,4;UBERON:0010082,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3609667836102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1652552125788,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,0,0,2.09244169283818,0,0,0,0,0,0,0,0.969332746095218,0.27830429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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=170691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17109 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002bvx.1_5end | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_4_at_ADAMTS17_5end | |||
|id=chr15:100879294..100879309,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.62e-23;1!CL:0000911;2.62e-23;1!CL:0000814;2.62e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.62e-23,1;CL:0000914,2.62e-23,1;CL:0000911,2.62e-23,1;CL:0000814,2.62e-23,1;CL:0002042,2.62e-23,1;CL:0002039,2.62e-23,1;CL:0002040,2.62e-23,1;CL:0002041,2.62e-23,1;CL:0000893,2.32e-12,2;CL:0002489,2.32e-12,2;CL:0000809,2.32e-12,2;CL:0000808,2.32e-12,2;CL:0000894,2.32e-12,2;CL:0000806,2.32e-12,2;CL:0000807,2.32e-12,2;CL:0000805,2.32e-12,2;CL:0002425,2.32e-12,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.32e-12;2!UBERON:0010122;3.24e-12;2!UBERON:0006965;3.24e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.50e-28!34;UBERON:0007023!2.22e-28!115;UBERON:0001869!8.17e-28!32;UBERON:0002780!1.26e-27!41;UBERON:0001890!1.26e-27!41;UBERON:0006240!1.26e-27!41;UBERON:0003080!7.93e-27!42;UBERON:0002791!8.14e-27!33;UBERON:0002020!7.10e-26!34;UBERON:0003528!7.10e-26!34;UBERON:0001049!7.52e-26!57;UBERON:0005068!7.52e-26!57;UBERON:0006241!7.52e-26!57;UBERON:0007135!7.52e-26!57;UBERON:0002619!6.55e-21!22;UBERON:0002616!1.10e-20!59;UBERON:0000956!1.42e-20!25;UBERON:0000203!1.42e-20!25;UBERON:0001950!6.07e-20!20;UBERON:0000955!9.88e-20!69;UBERON:0006238!9.88e-20!69;UBERON:0005743!8.41e-19!86;UBERON:0001017!1.77e-18!82;UBERON:0003056!2.39e-18!61;UBERON:0000073!2.77e-16!94;UBERON:0001016!2.77e-16!94;UBERON:0003075!4.14e-16!86;UBERON:0007284!4.14e-16!86;UBERON:0000153!3.44e-15!129;UBERON:0007811!3.44e-15!129;UBERON:0002346!4.59e-15!90;UBERON:0000033!9.70e-11!123;UBERON:0001871!1.24e-10!7;UBERON:0004177!4.98e-10!7;UBERON:0000200!2.42e-09!6;UBERON:0000025!1.20e-07!194;UBERON:0002771!1.75e-07!3;UBERON:0002370!3.14e-07!4;UBERON:0005058!3.14e-07!4;UBERON:0009113!3.14e-07!4;UBERON:0003295!3.14e-07!4;UBERON:0005562!3.14e-07!4;UBERON:0002420!4.77e-07!9;UBERON:0007245!4.77e-07!9;UBERON:0010009!4.77e-07!9;UBERON:0010011!4.77e-07!9;UBERON:0000454!4.77e-07!9;UBERON:0000974!8.64e-07!10;UBERON:0002308!8.82e-07!9;UBERON:0000125!8.82e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.25e-45;2!UBERON:0005058;6.25e-45;2!UBERON:0009113;6.25e-45;2!UBERON:0004177;1.13e-18;5!UBERON:0005057;1.13e-18;5!UBERON:0001873;3.24e-12;2!UBERON:0005383;1.40e-08;3!UBERON:0005382;1.40e-08;3!UBERON:0000369;9.63e-07;4!UBERON:0002435;9.63e-07;4!UBERON:0000204;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.37e-50,4;UBERON:0005058,4.37e-50,4;UBERON:0009113,4.37e-50,4;UBERON:0003295,4.37e-50,4;UBERON:0005562,4.37e-50,4;UBERON:0003351,1.05e-33,6;UBERON:0004177,5.13e-29,7;UBERON:0005057,5.13e-29,7;UBERON:0000974,1.47e-20,10;UBERON:0003408,1.47e-20,10;UBERON:0001042,1.47e-20,10;UBERON:0009145,1.47e-20,10;UBERON:0006562,9.20e-19,11;UBERON:0009722,9.20e-19,11;UBERON:0007690,9.20e-19,11;UBERON:0001873,2.90e-12,2;UBERON:0010122,2.90e-12,2;UBERON:0008814,9.59e-12,18;UBERON:0001557,3.67e-11,19;UBERON:0005383,1.30e-08,3;UBERON:0005382,1.30e-08,3;UBERON:0004807,9.00e-08,28;UBERON:0000077,1.59e-07,29;UBERON:0000369,9.11e-07,4;UBERON:0002435,9.11e-07,4;UBERON:0000204,9.11e-07,4;UBERON:0010082,9.11e-07,4 | |||
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|short_description=p4@ADAMTS17 | |||
}} |
Revision as of 06:17, 11 September 2013
Short description: | p4@ADAMTS17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ADAMTS17_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 0bp_to_uc002bvx.1_5end |
EntrezGene: | ADAMTS17 |
HGNC: | 17109 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.62e-23 | 1 |
immature NK T cell | 2.62e-23 | 1 |
effector T cell | 2.62e-23 | 1 |
mature NK T cell | 2.62e-23 | 1 |
immature NK T cell stage IV | 2.62e-23 | 1 |
immature NK T cell stage I | 2.62e-23 | 1 |
immature NK T cell stage II | 2.62e-23 | 1 |
immature NK T cell stage III | 2.62e-23 | 1 |
thymocyte | 2.32e-12 | 2 |
double negative thymocyte | 2.32e-12 | 2 |
double-positive, alpha-beta thymocyte | 2.32e-12 | 2 |
DN4 thymocyte | 2.32e-12 | 2 |
DN1 thymic pro-T cell | 2.32e-12 | 2 |
DN2 thymocyte | 2.32e-12 | 2 |
DN3 thymocyte | 2.32e-12 | 2 |
immature single positive thymocyte | 2.32e-12 | 2 |
early T lineage precursor | 2.32e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.37e-50 | 4 |
hemolymphoid system gland | 4.37e-50 | 4 |
thymic region | 4.37e-50 | 4 |
pharyngeal gland | 4.37e-50 | 4 |
thymus primordium | 4.37e-50 | 4 |
pharyngeal epithelium | 1.05e-33 | 6 |
hemopoietic organ | 5.13e-29 | 7 |
immune organ | 5.13e-29 | 7 |
neck | 1.47e-20 | 10 |
gland of gut | 1.47e-20 | 10 |
chordate pharynx | 1.47e-20 | 10 |
pharyngeal region of foregut | 1.47e-20 | 10 |
pharynx | 9.20e-19 | 11 |
entire pharyngeal arch endoderm | 9.20e-19 | 11 |
early pharyngeal endoderm | 9.20e-19 | 11 |
caudate nucleus | 2.90e-12 | 2 |
future caudate nucleus | 2.90e-12 | 2 |
pharyngeal arch system | 9.59e-12 | 18 |
upper respiratory tract | 3.67e-11 | 19 |
caudate-putamen | 1.30e-08 | 3 |
dorsal striatum | 1.30e-08 | 3 |
respiratory system epithelium | 9.00e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 1.59e-07 | 29 |
corpus striatum | 9.11e-07 | 4 |
striatum | 9.11e-07 | 4 |
ventral part of telencephalon | 9.11e-07 | 4 |
future corpus striatum | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.