FFCP PHASE1:Hg19::chr13:114005957..114005983,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=39917|TSSclassifier=S|UniProt=|association_with_transcript=-4bp_to_ENST00000419199_5end|description=CAGE_peak_1_at_GRTP1-AS1_5end|id=chr13:114005957..114005983,+|ontology_enrichment_celltype=CL:0002144!1.51e-07!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004874;7.22e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;2.16e-10;1!DOID:8552;7.22e-10;1|ontology_enrichment_disease_v019_2=DOID:9119,1.98e-10,1;DOID:8552,6.33e-10,1|ontology_enrichment_uberon=UBERON:0007023!1.64e-58!115;UBERON:0001049!1.30e-39!57;UBERON:0005068!1.30e-39!57;UBERON:0006241!1.30e-39!57;UBERON:0007135!1.30e-39!57;UBERON:0002616!3.58e-33!59;UBERON:0000955!2.70e-28!69;UBERON:0006238!2.70e-28!69;UBERON:0002780!3.01e-28!41;UBERON:0001890!3.01e-28!41;UBERON:0006240!3.01e-28!41;UBERON:0003080!2.06e-27!42;UBERON:0001017!2.78e-27!82;UBERON:0002020!3.55e-27!34;UBERON:0003528!3.55e-27!34;UBERON:0005743!3.98e-27!86;UBERON:0001893!7.88e-27!34;UBERON:0003075!6.35e-26!86;UBERON:0007284!6.35e-26!86;UBERON:0002791!1.98e-25!33;UBERON:0002346!2.65e-24!90;UBERON:0000073!1.43e-23!94;UBERON:0001016!1.43e-23!94;UBERON:0001869!1.82e-23!32;UBERON:0004111!6.61e-19!241;UBERON:0000477!2.54e-18!286;UBERON:0003056!3.29e-18!61;UBERON:0002619!5.17e-18!22;UBERON:0000025!1.55e-16!194;UBERON:0000956!1.80e-15!25;UBERON:0000203!1.80e-15!25;UBERON:0000153!1.82e-15!129;UBERON:0007811!1.82e-15!129;UBERON:0002420!5.26e-15!9;UBERON:0007245!5.26e-15!9;UBERON:0010009!5.26e-15!9;UBERON:0010011!5.26e-15!9;UBERON:0000454!5.26e-15!9;UBERON:0000033!1.01e-14!123;UBERON:0002308!1.41e-14!9;UBERON:0000125!1.41e-14!9;UBERON:0001950!2.15e-14!20;UBERON:0002298!1.50e-13!8;UBERON:0003076!3.28e-13!15;UBERON:0003057!3.28e-13!15;UBERON:0000200!1.29e-12!6;UBERON:0000349!2.60e-12!5;UBERON:0004733!7.10e-11!12;UBERON:0002028!7.10e-11!12;UBERON:0007277!7.10e-11!12;UBERON:0009663!8.71e-11!7;UBERON:0001871!3.07e-10!7;UBERON:0000483!6.07e-10!309;UBERON:0004732!6.43e-10!13;UBERON:0000119!1.03e-09!312;UBERON:0004121!1.61e-09!169;UBERON:0000924!4.40e-09!173;UBERON:0006601!4.40e-09!173;UBERON:0001896!7.86e-08!3;UBERON:0005290!7.86e-08!3;UBERON:0010096!7.86e-08!3;UBERON:0006331!1.16e-07!3;UBERON:0000475!1.17e-07!365;UBERON:0001915!1.51e-07!3;UBERON:0002771!1.51e-07!3;UBERON:0001982!1.51e-07!3;UBERON:0000988!2.11e-07!3;UBERON:0000064!4.99e-07!219;UBERON:0000062!8.13e-07!511|ontology_enrichment_uberon_v019=UBERON:0000349;2.43e-28;5!UBERON:0001954;7.67e-19;2!UBERON:0003022;7.67e-19;2!UBERON:0002421;7.67e-19;2!UBERON:0002600;7.67e-19;2!UBERON:0001876;2.53e-18;2!UBERON:0002420;9.90e-16;9!UBERON:0007245;9.90e-16;9!UBERON:0010009;9.90e-16;9!UBERON:0010011;9.90e-16;9!UBERON:0000454;9.90e-16;9!UBERON:0002106;1.54e-12;3!UBERON:0001389;1.65e-10;1!UBERON:0000026;1.65e-10;1!UBERON:0008784;1.65e-10;1!UBERON:0006058;1.65e-10;1!UBERON:0003663;1.65e-10;1!UBERON:0004256;1.65e-10;1!UBERON:0004708;1.65e-10;1!UBERON:0002101;1.65e-10;1!UBERON:0004709;1.65e-10;1!UBERON:0002529;1.65e-10;1!UBERON:0010538;1.65e-10;1!UBERON:0003661;1.65e-10;1!UBERON:0010890;1.65e-10;1!UBERON:0002471;1.65e-10;1!UBERON:0001383;1.65e-10;1!UBERON:0010758;1.65e-10;1!UBERON:0010707;1.65e-10;1!UBERON:0000978;1.65e-10;1!UBERON:0002103;1.65e-10;1!UBERON:0001665;1.65e-10;1!UBERON:0003823;1.65e-10;1!UBERON:0000154;1.65e-10;1!UBERON:0010709;1.65e-10;1!UBERON:0000029;7.22e-10;1!UBERON:0002038;7.22e-10;1!UBERON:0000989;7.22e-10;1!UBERON:0008811;7.22e-10;1!UBERON:0009661;7.22e-10;1!UBERON:0002950;7.22e-10;1!UBERON:0001891;7.22e-10;1!UBERON:0002780;1.50e-08;41!UBERON:0001890;1.50e-08;41!UBERON:0002791;2.09e-08;32!UBERON:0004177;7.12e-08;5!UBERON:0005057;7.12e-08;5!UBERON:0003135;9.57e-08;11!UBERON:0003528;2.61e-07;34!UBERON:0002020;2.61e-07;34!UBERON:0000073;5.67e-07;53!UBERON:0002616;5.67e-07;53|ontology_enrichment_uberon_v019_2=UBERON:0000349,2.71e-28,5;UBERON:0001954,7.68e-19,2;UBERON:0003022,7.68e-19,2;UBERON:0002421,7.68e-19,2;UBERON:0002600,7.68e-19,2;UBERON:0001876,2.90e-18,2;UBERON:0002420,1.40e-15,9;UBERON:0007245,1.40e-15,9;UBERON:0010009,1.40e-15,9;UBERON:0010011,1.40e-15,9;UBERON:0000454,1.40e-15,9;UBERON:0007023,1.34e-14,114;UBERON:0002106,1.78e-12,3;UBERON:0004854,1.78e-12,3;UBERON:0009034,1.78e-12,3;UBERON:0002095,1.78e-12,3;UBERON:0004782,1.78e-12,3;UBERON:0003281,1.78e-12,3;UBERON:0009664,1.78e-12,3;UBERON:0002296,1.78e-12,3;UBERON:0005602,1.78e-12,3;UBERON:0001179,1.78e-12,3;UBERON:0006293,1.78e-12,3;UBERON:0005418,1.65e-10,1;UBERON:0001389,1.65e-10,1;UBERON:0000026,1.65e-10,1;UBERON:0008784,1.65e-10,1;UBERON:0006058,1.65e-10,1;UBERON:0003663,1.65e-10,1;UBERON:0004256,1.65e-10,1;UBERON:0004708,1.65e-10,1;UBERON:0002101,1.65e-10,1;UBERON:0004709,1.65e-10,1;UBERON:0002529,1.65e-10,1;UBERON:0010538,1.65e-10,1;UBERON:0003661,1.65e-10,1;UBERON:0010890,1.65e-10,1;UBERON:0002471,1.65e-10,1;UBERON:0001383,1.65e-10,1;UBERON:0004357,1.65e-10,1;UBERON:0004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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39917 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000419199_5end | |||
|description=CAGE_peak_1_at_GRTP1-AS1_5end | |||
|id=chr13:114005957..114005983,+ | |||
|ontology_enrichment_celltype=CL:0002144!1.51e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.22e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.16e-10;1!DOID:8552;7.22e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.98e-10,1;DOID:8552,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-58!115;UBERON:0001049!1.30e-39!57;UBERON:0005068!1.30e-39!57;UBERON:0006241!1.30e-39!57;UBERON:0007135!1.30e-39!57;UBERON:0002616!3.58e-33!59;UBERON:0000955!2.70e-28!69;UBERON:0006238!2.70e-28!69;UBERON:0002780!3.01e-28!41;UBERON:0001890!3.01e-28!41;UBERON:0006240!3.01e-28!41;UBERON:0003080!2.06e-27!42;UBERON:0001017!2.78e-27!82;UBERON:0002020!3.55e-27!34;UBERON:0003528!3.55e-27!34;UBERON:0005743!3.98e-27!86;UBERON:0001893!7.88e-27!34;UBERON:0003075!6.35e-26!86;UBERON:0007284!6.35e-26!86;UBERON:0002791!1.98e-25!33;UBERON:0002346!2.65e-24!90;UBERON:0000073!1.43e-23!94;UBERON:0001016!1.43e-23!94;UBERON:0001869!1.82e-23!32;UBERON:0004111!6.61e-19!241;UBERON:0000477!2.54e-18!286;UBERON:0003056!3.29e-18!61;UBERON:0002619!5.17e-18!22;UBERON:0000025!1.55e-16!194;UBERON:0000956!1.80e-15!25;UBERON:0000203!1.80e-15!25;UBERON:0000153!1.82e-15!129;UBERON:0007811!1.82e-15!129;UBERON:0002420!5.26e-15!9;UBERON:0007245!5.26e-15!9;UBERON:0010009!5.26e-15!9;UBERON:0010011!5.26e-15!9;UBERON:0000454!5.26e-15!9;UBERON:0000033!1.01e-14!123;UBERON:0002308!1.41e-14!9;UBERON:0000125!1.41e-14!9;UBERON:0001950!2.15e-14!20;UBERON:0002298!1.50e-13!8;UBERON:0003076!3.28e-13!15;UBERON:0003057!3.28e-13!15;UBERON:0000200!1.29e-12!6;UBERON:0000349!2.60e-12!5;UBERON:0004733!7.10e-11!12;UBERON:0002028!7.10e-11!12;UBERON:0007277!7.10e-11!12;UBERON:0009663!8.71e-11!7;UBERON:0001871!3.07e-10!7;UBERON:0000483!6.07e-10!309;UBERON:0004732!6.43e-10!13;UBERON:0000119!1.03e-09!312;UBERON:0004121!1.61e-09!169;UBERON:0000924!4.40e-09!173;UBERON:0006601!4.40e-09!173;UBERON:0001896!7.86e-08!3;UBERON:0005290!7.86e-08!3;UBERON:0010096!7.86e-08!3;UBERON:0006331!1.16e-07!3;UBERON:0000475!1.17e-07!365;UBERON:0001915!1.51e-07!3;UBERON:0002771!1.51e-07!3;UBERON:0001982!1.51e-07!3;UBERON:0000988!2.11e-07!3;UBERON:0000064!4.99e-07!219;UBERON:0000062!8.13e-07!511 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,3.04108842287405,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,1.87676382089396,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66379164797602,2.81974010175699,0,0,0,0,0,0,0,0,2.98244294329889,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,1.82832850090172,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,2.45166131000836,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0.517131825446202,0.39669780522807,0,0,0.427149650270779,0.314408610199332,0.414239055347196,1.9846640872478,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.3755727921195,1.72022758707021,0.443716206147409,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0,0,1.96232732126285,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17943069750316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,1.4097587696978,2.51385763096951,0,0,0,0,0.730336388246517,0,1.00337708206016,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,3.48353369203032,1.65833887891756,0.930896962757057,0.213233981900981,0,0,0.0620747142958579,0,0.190941474834495,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@GRTP1-AS1 | |||
}} |
Revision as of 01:36, 11 September 2013
Short description: | p1@GRTP1-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GRTP1-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000419199_5end |
EntrezGene: | NA |
HGNC: | 39917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.98e-10 | 1 |
chronic myeloid leukemia | 6.33e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.