FFCP PHASE1:Hg19::chr11:2152856..2152896,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3481|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5466|TSSclassifier=W|UniProt=|association_with_transcript=-267bp_to_AK074614_5end|coexpression_cluster_id=C172|description=CAGE_peak_21_at_IGF2_5end|id=chr11:2152856..2152896,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;7.31e-13;19|ontology_enrichment_celltype_v019_2=CL:0000349,5.88e-13,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!1.65e-11!347;UBERON:0005631!4.76e-11!14;UBERON:0000158!4.76e-11!14;UBERON:0000468!6.71e-10!659;UBERON:0000478!1.22e-08!24;UBERON:0000922!2.67e-08!612;UBERON:0001008!4.63e-08!45;UBERON:0006554!9.61e-08!44;UBERON:0004119!1.45e-07!169;UBERON:0000925!1.45e-07!169;UBERON:0006595!1.45e-07!169;UBERON:0000119!1.96e-07!312;UBERON:0007023!2.04e-07!115;UBERON:0003124!2.39e-07!7;UBERON:0000483!2.65e-07!309;UBERON:0005256!3.67e-07!143;UBERON:0001046!4.81e-07!19;UBERON:0002050!7.56e-07!605;UBERON:0005423!7.56e-07!605|ontology_enrichment_uberon_v019=UBERON:0000478;8.70e-13;24!UBERON:0005631;1.96e-11;10!UBERON:0000158;1.96e-11;10!UBERON:0005409;2.63e-08;22!UBERON:0000922;3.10e-08;49!UBERON:0000160;6.49e-08;17!UBERON:0000305;8.26e-08;7!UBERON:0002107;3.65e-07;19!UBERON:0006925;3.65e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.45e-16,14;UBERON:0000158,1.45e-16,14;UBERON:0000478,7.18e-13,24;UBERON:0003124,1.71e-10,7;UBERON:0003104,2.25e-10,160;UBERON:0009142,2.25e-10,160;UBERON:0006554,4.24e-09,47;UBERON:0004119,4.85e-09,160;UBERON:0000925,4.85e-09,160;UBERON:0006595,4.85e-09,160;UBERON:0001008,8.86e-09,48;UBERON:0000160,8.05e-08,17;UBERON:0000305,8.11e-08,7;UBERON:0002107,2.73e-07,19;UBERON:0006925,2.73e-07,19;UBERON:0008836,2.73e-07,19;UBERON:0004923,6.88e-07,66;UBERON:0005409,7.28e-07,25|phase1_expression=1.09007027562334,0.642301571672949,0,1.0007329835313,2.68176656656373,5.23403114460221,0,0,0,0,2.09340350391728,27.0867301441414,38.5099788213542,0.866364470720326,4.97096063591874,0,0,0,0,1.10808952269109,10.2000345622127,2.5076377718247,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,2.60723734129483,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,1.12135520028461,0,0.24666754841716,0,0.134710672069688,0,2.8757911252537,5.18558332031999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,8.65434252474949,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,1.93975268182574,0,0,0.339121184620975,0,0,0,0,0.265059536642971,1.62671520017326,0.932949495138334,0.504641701751257,0,0,0,0,5.10804720835177,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,8.87285243752816,1.96565443335525,13.5881678536723,0,15.9884970106048,0,0,0,0,1.20364978706088,0,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,1.32969058292435,0,0.514414748524284,0,0,3.71742783511184,35.2704043504438,0.823240336780769,0,3.55391948742546,2.37585561880029,0,0,0,0,0,0,0,0,0,2.31650090668127,1.02738161275192,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,5.5211171273613,28.5097197004016,6.51036056879365,12.89419341491,3.21172179834891,3.15404830067869,5.62278791965023,0,0,0,0,0.368738337083406,0,57.1739379791202,162.306839462535,0,0,0,6.06255142892519,4.99306318531491,23.5864428797151,0.248107807818777,0.61384789315225,0.280660094433074,0,0,1.44768529029247,0,0,0,0,1.03850885836724,0,17.4037607411936,1.00253235151642,0.0920809889358963,1.7222167224691,1.82091168006717,1.70461739447251,0,1.07821471946181,0,0,0.105551628892876,1.13733384070897,0.510281115829547,1.0795795805107,4.62681758070868,0.541892875087706,3.01013864312912,0,0,0.671624264166535,0.219259876645935,0.522870902049801,0,0,0,1.75169719801128,0,0,0,0,0,1.25671933779759,0.154048617114644,0.307007349452259,0.827019434907183,0,0.435050081742686,1.27839941124151,33.1199172605863,0.495854746082934,1.53752053892085,0.127612712494584,1.0115778085555,0,0.62962469366128,0,0,0,0,0,0,0,1.2655176988749,1.14378116354295,0,3.42351190427136,0,0,2.51821440616641,1.09814811894422,1.17812402345686,0,0,0,1.46290121726877,0,0,7.50749512743922,0.848432591722276,0,0,0,0,0,0,0,0,0,0.286822704408103,0.88424136911809,0,0,0,0,0.379473173765715,3.84928192269481,0.192444225451024,0,0,1.69458841398202,0.43050537267123,1.68471475667626,4.43430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32462194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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-267bp_to_AK074614_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_21_at_IGF2_5end | |||
|id=chr11:2152856..2152896,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.31e-13;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.88e-13,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.65e-11!347;UBERON:0005631!4.76e-11!14;UBERON:0000158!4.76e-11!14;UBERON:0000468!6.71e-10!659;UBERON:0000478!1.22e-08!24;UBERON:0000922!2.67e-08!612;UBERON:0001008!4.63e-08!45;UBERON:0006554!9.61e-08!44;UBERON:0004119!1.45e-07!169;UBERON:0000925!1.45e-07!169;UBERON:0006595!1.45e-07!169;UBERON:0000119!1.96e-07!312;UBERON:0007023!2.04e-07!115;UBERON:0003124!2.39e-07!7;UBERON:0000483!2.65e-07!309;UBERON:0005256!3.67e-07!143;UBERON:0001046!4.81e-07!19;UBERON:0002050!7.56e-07!605;UBERON:0005423!7.56e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;8.70e-13;24!UBERON:0005631;1.96e-11;10!UBERON:0000158;1.96e-11;10!UBERON:0005409;2.63e-08;22!UBERON:0000922;3.10e-08;49!UBERON:0000160;6.49e-08;17!UBERON:0000305;8.26e-08;7!UBERON:0002107;3.65e-07;19!UBERON:0006925;3.65e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.45e-16,14;UBERON:0000158,1.45e-16,14;UBERON:0000478,7.18e-13,24;UBERON:0003124,1.71e-10,7;UBERON:0003104,2.25e-10,160;UBERON:0009142,2.25e-10,160;UBERON:0006554,4.24e-09,47;UBERON:0004119,4.85e-09,160;UBERON:0000925,4.85e-09,160;UBERON:0006595,4.85e-09,160;UBERON:0001008,8.86e-09,48;UBERON:0000160,8.05e-08,17;UBERON:0000305,8.11e-08,7;UBERON:0002107,2.73e-07,19;UBERON:0006925,2.73e-07,19;UBERON:0008836,2.73e-07,19;UBERON:0004923,6.88e-07,66;UBERON:0005409,7.28e-07,25 | |||
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| |||
|short_description=p21@IGF2 | |||
}} |
Revision as of 17:11, 10 September 2013
Short description: | p21@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -267bp_to_AK074614_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.88e-13 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.45e-16 | 14 |
membranous layer | 1.45e-16 | 14 |
extraembryonic structure | 7.18e-13 | 24 |
chorion | 1.71e-10 | 7 |
mesenchyme | 2.25e-10 | 160 |
entire embryonic mesenchyme | 2.25e-10 | 160 |
urinary system structure | 4.24e-09 | 47 |
endoderm-derived structure | 4.85e-09 | 160 |
endoderm | 4.85e-09 | 160 |
presumptive endoderm | 4.85e-09 | 160 |
renal system | 8.86e-09 | 48 |
intestine | 8.05e-08 | 17 |
amnion | 8.11e-08 | 7 |
liver | 2.73e-07 | 19 |
digestive gland | 2.73e-07 | 19 |
liver bud | 2.73e-07 | 19 |
organ component layer | 6.88e-07 | 66 |
gastrointestinal system | 7.28e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.