FFCP PHASE1:Hg19::chr10:63853479..63853496,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84159|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=17362|TSSclassifier=N|UniProt=|association_with_transcript=-329bp_to_AL049471_5end|description=CAGE_peak_21_at_ARID5B_5end|id=chr10:63853479..63853496,+|ontology_enrichment_celltype=CL:0002620!6.00e-08!23|ontology_enrichment_celltype_v019=CL:0002620;2.22e-14;23!CL:0002564;1.27e-08;3!CL:0002615;1.48e-08;3!CL:0002616;2.35e-07;1!CL:0000511;8.00e-07;1!CL:0002625;8.00e-07;1!CL:0000216;8.00e-07;1|ontology_enrichment_celltype_v019_2=CL:0002620,1.46e-14,23;CL:0002615,9.80e-09,3;CL:0002564,1.93e-08,3;CL:0002616,2.50e-07,1;CL:0000511,4.51e-07,1;CL:0002625,4.51e-07,1;CL:0000216,4.51e-07,1|ontology_enrichment_development_v019=UBERON:0000358;3.56e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.77e-10;5!DOID:450;1.77e-10;5!DOID:66;1.77e-10;5!DOID:423;1.77e-10;5!DOID:0080000;1.77e-10;5!DOID:11722;1.77e-10;5|ontology_enrichment_disease_v019_2=DOID:17,9.47e-11,5;DOID:450,9.47e-11,5;DOID:66,9.47e-11,5;DOID:423,9.47e-11,5;DOID:0080000,9.47e-11,5;DOID:11722,9.47e-11,5|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004905;1.19e-11;8!UBERON:0000982;1.19e-11;8!UBERON:0004770;1.19e-11;8!UBERON:0011135;8.82e-11;5!UBERON:0002216;8.82e-11;5!UBERON:0011134;8.82e-11;5!UBERON:0002209;8.82e-11;5!UBERON:0002213;8.82e-11;5!UBERON:0007844;8.82e-11;5!UBERON:0011138;8.82e-11;5!UBERON:0001130;8.82e-11;5!UBERON:0001066;8.82e-11;5!UBERON:0001468;8.82e-11;5!UBERON:0002242;1.27e-08;3!UBERON:0001136;8.00e-07;1!UBERON:0001343;8.00e-07;1!UBERON:0004910;8.00e-07;1!UBERON:0004813;8.00e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.53e-11,8;UBERON:0000982,1.53e-11,8;UBERON:0004770,1.53e-11,8;UBERON:0011135,1.24e-10,5;UBERON:0002216,1.24e-10,5;UBERON:0011134,1.24e-10,5;UBERON:0002209,1.24e-10,5;UBERON:0002213,1.24e-10,5;UBERON:0005856,1.24e-10,5;UBERON:0005866,1.24e-10,5;UBERON:0005863,1.24e-10,5;UBERON:0007844,1.24e-10,5;UBERON:0011138,1.24e-10,5;UBERON:0001130,1.24e-10,5;UBERON:0001066,1.24e-10,5;UBERON:0001468,1.24e-10,5;UBERON:0002242,1.93e-08,3;UBERON:0003068,1.93e-08,3;UBERON:0002328,1.93e-08,3;UBERON:0004880,1.93e-08,3;UBERON:0002097,1.21e-07,41;UBERON:0001136,4.51e-07,1;UBERON:0001343,4.51e-07,1;UBERON:0004910,4.51e-07,1;UBERON:0005154,4.51e-07,1;UBERON:0005295,4.51e-07,1;UBERON:0004813,4.51e-07,1;UBERON:0005297,4.51e-07,1;UBERON:0005294,4.51e-07,1;UBERON:0010141,4.51e-07,1;UBERON:0005891,4.51e-07,1|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,3.00219895059391,1.78784437770915,4.36169262050184,0,0,0,0,0,0.218441372130172,0,0.37129905888014,1.32558950291166,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,1.28019066769952,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,4.3372698286148,1.50401373190767,0.579386075843295,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,1.43418310374407,0.354668382198357,0,0,0,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0.469737994575059,0.323745888736263,0.561803226808994,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,1.61450672119976,1.49490172172997,0,0.600182192168805,1.33968288009971,1.54584324027377,0,0.168776332241266,1.16924406193438,2.01947019395292,0.368199594569197,4.68773564774555,0.710019185033229,1.30977727695932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0.117408694235822,0.288732895522148,0,0.951270761172991,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,3.12022310734098,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0.36807447515742,1.00034104211935,4.6115054028955,1.03985430765404,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0.434418072340414,0.195801157462741,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0.30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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17362 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-329bp_to_AL049471_5end | |||
|description=CAGE_peak_21_at_ARID5B_5end | |||
|id=chr10:63853479..63853496,+ | |||
|ontology_enrichment_celltype=CL:0002620!6.00e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.22e-14;23!CL:0002564;1.27e-08;3!CL:0002615;1.48e-08;3!CL:0002616;2.35e-07;1!CL:0000511;8.00e-07;1!CL:0002625;8.00e-07;1!CL:0000216;8.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.46e-14,23;CL:0002615,9.80e-09,3;CL:0002564,1.93e-08,3;CL:0002616,2.50e-07,1;CL:0000511,4.51e-07,1;CL:0002625,4.51e-07,1;CL:0000216,4.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.56e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.77e-10;5!DOID:450;1.77e-10;5!DOID:66;1.77e-10;5!DOID:423;1.77e-10;5!DOID:0080000;1.77e-10;5!DOID:11722;1.77e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.47e-11,5;DOID:450,9.47e-11,5;DOID:66,9.47e-11,5;DOID:423,9.47e-11,5;DOID:0080000,9.47e-11,5;DOID:11722,9.47e-11,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.19e-11;8!UBERON:0000982;1.19e-11;8!UBERON:0004770;1.19e-11;8!UBERON:0011135;8.82e-11;5!UBERON:0002216;8.82e-11;5!UBERON:0011134;8.82e-11;5!UBERON:0002209;8.82e-11;5!UBERON:0002213;8.82e-11;5!UBERON:0007844;8.82e-11;5!UBERON:0011138;8.82e-11;5!UBERON:0001130;8.82e-11;5!UBERON:0001066;8.82e-11;5!UBERON:0001468;8.82e-11;5!UBERON:0002242;1.27e-08;3!UBERON:0001136;8.00e-07;1!UBERON:0001343;8.00e-07;1!UBERON:0004910;8.00e-07;1!UBERON:0004813;8.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,1.53e-11,8;UBERON:0000982,1.53e-11,8;UBERON:0004770,1.53e-11,8;UBERON:0011135,1.24e-10,5;UBERON:0002216,1.24e-10,5;UBERON:0011134,1.24e-10,5;UBERON:0002209,1.24e-10,5;UBERON:0002213,1.24e-10,5;UBERON:0005856,1.24e-10,5;UBERON:0005866,1.24e-10,5;UBERON:0005863,1.24e-10,5;UBERON:0007844,1.24e-10,5;UBERON:0011138,1.24e-10,5;UBERON:0001130,1.24e-10,5;UBERON:0001066,1.24e-10,5;UBERON:0001468,1.24e-10,5;UBERON:0002242,1.93e-08,3;UBERON:0003068,1.93e-08,3;UBERON:0002328,1.93e-08,3;UBERON:0004880,1.93e-08,3;UBERON:0002097,1.21e-07,41;UBERON:0001136,4.51e-07,1;UBERON:0001343,4.51e-07,1;UBERON:0004910,4.51e-07,1;UBERON:0005154,4.51e-07,1;UBERON:0005295,4.51e-07,1;UBERON:0004813,4.51e-07,1;UBERON:0005297,4.51e-07,1;UBERON:0005294,4.51e-07,1;UBERON:0010141,4.51e-07,1;UBERON:0005891,4.51e-07,1 | |||
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| |||
|short_description=p21@ARID5B | |||
}} |
Revision as of 13:54, 10 September 2013
Short description: | p21@ARID5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_ARID5B_5end |
Coexpression cluster: | NA |
Association with transcript: | -329bp_to_AL049471_5end |
EntrezGene: | ARID5B |
HGNC: | 17362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.46e-14 | 23 |
adipocyte of omentum tissue | 9.80e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 1.93e-08 | 3 |
perirenal adipocyte cell | 2.50e-07 | 1 |
androgen binding protein secreting cell | 4.51e-07 | 1 |
seminiferous tubule epithelial cell | 4.51e-07 | 1 |
Sertoli cell | 4.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
articulation | 1.53e-11 | 8 |
skeletal joint | 1.53e-11 | 8 |
articular system | 1.53e-11 | 8 |
intervertebral cartilage | 1.24e-10 | 5 |
symphysis | 1.24e-10 | 5 |
nonsynovial joint | 1.24e-10 | 5 |
fibrous joint | 1.24e-10 | 5 |
cartilaginous joint | 1.24e-10 | 5 |
developing mesenchymal condensation | 1.24e-10 | 5 |
pre-cartilage condensation | 1.24e-10 | 5 |
cartilaginous condensation | 1.24e-10 | 5 |
cartilage element | 1.24e-10 | 5 |
post-cranial axial skeletal system | 1.24e-10 | 5 |
vertebral column | 1.24e-10 | 5 |
intervertebral disk | 1.24e-10 | 5 |
intervertebral joint | 1.24e-10 | 5 |
nucleus pulposus | 1.93e-08 | 3 |
axial mesoderm | 1.93e-08 | 3 |
notochord | 1.93e-08 | 3 |
chordamesoderm | 1.93e-08 | 3 |
skin of body | 1.21e-07 | 41 |
mesothelium | 4.51e-07 | 1 |
seminiferous tubule of testis | 4.51e-07 | 1 |
epithelium of male gonad | 4.51e-07 | 1 |
epithelial cord | 4.51e-07 | 1 |
sex cord | 4.51e-07 | 1 |
seminiferous tubule epithelium | 4.51e-07 | 1 |
testis sex cord | 4.51e-07 | 1 |
genital ridge | 4.51e-07 | 1 |
primitive sex cord of indifferent gonad | 4.51e-07 | 1 |
coelomic epithelium | 4.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.47e-11 | 5 |
myotonic disease | 9.47e-11 | 5 |
muscle tissue disease | 9.47e-11 | 5 |
myopathy | 9.47e-11 | 5 |
muscular disease | 9.47e-11 | 5 |
myotonic dystrophy | 9.47e-11 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.