FFCP PHASE1:Hg19::chr10:21661870..21661885,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000433460_5end|description=CAGE_peak_1_at_ENST00000433460_5end|id=chr10:21661870..21661885,-|ontology_enrichment_celltype=CL:0002139!7.73e-19!24;CL:0000071!3.06e-16!18;CL:0002546!3.06e-16!18;CL:0000076!4.17e-14!62;CL:1000413!4.29e-13!9;CL:0000213!4.66e-13!57;CL:0000215!4.66e-13!57;CL:0000115!5.24e-11!35;CL:0002078!6.86e-10!44;CL:0002544!4.75e-09!6;CL:0000222!7.00e-07!119|ontology_enrichment_celltype_v019=CL:0002139;2.79e-15;24!CL:0002537;3.19e-10;5!CL:0000071;1.77e-09;18!CL:0002078;3.97e-08;45!CL:0000115;4.01e-08;36!CL:0002543;5.54e-08;6!CL:0002138;5.54e-08;6!CL:0002618;1.33e-07;3|ontology_enrichment_celltype_v019_2=CL:0002139,2.20e-15,24;CL:0002537,3.14e-10,5;CL:0000213,4.13e-10,58;CL:0000215,4.13e-10,58;CL:0000115,9.50e-10,36;CL:0000071,1.34e-09,18;CL:0002546,1.34e-09,18;CL:0002078,2.22e-09,45;CL:0002543,3.89e-08,6;CL:0005020,6.19e-08,6;CL:0002138,6.19e-08,6;CL:0005022,6.19e-08,6;CL:0002618,1.09e-07,3|ontology_enrichment_development_v019=CL:0002546;1.77e-09;18!CL:0005022;5.54e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;9.04e-07;1!DOID:4549;9.04e-07;1!DOID:5861;9.04e-07;1!DOID:6496;9.04e-07;1|ontology_enrichment_disease_v019_2=DOID:3371,9.30e-07,1;DOID:4549,9.30e-07,1;DOID:5861,9.30e-07,1;DOID:6496,9.30e-07,1|ontology_enrichment_uberon=UBERON:0001986!3.06e-16!18;UBERON:0004638!3.06e-16!18;UBERON:0004852!3.06e-16!18;UBERON:0000487!1.53e-14!22;UBERON:0006914!3.67e-14!25;UBERON:0003915!4.29e-13!9;UBERON:0004700!4.29e-13!9;UBERON:0001917!4.29e-13!9;UBERON:0002049!2.65e-07!79;UBERON:0007798!2.65e-07!79;UBERON:0004872!6.91e-07!84|ontology_enrichment_uberon_v019=UBERON:0006914;7.72e-12;25!UBERON:0000487;2.21e-10;22!UBERON:0004638;1.77e-09;18!UBERON:0001986;1.77e-09;18!UBERON:0004852;1.77e-09;18!UBERON:0002108;2.45e-09;4!UBERON:0002114;1.99e-07;2!UBERON:0000305;2.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0006914,5.89e-12,25;UBERON:0000487,1.70e-10,22;UBERON:0004638,1.34e-09,18;UBERON:0001986,1.34e-09,18;UBERON:0004852,1.34e-09,18;UBERON:0002108,3.75e-09,4;UBERON:0000305,2.02e-07,7;UBERON:0002114,2.76e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.152826811495903,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,2.09749718104953,4.12677062910101,0.626984899610432,2.84258435086262,1.42306505074684,1.00416183829401,0.402829317109147,0,0,1.47065232138347,0.81014194788176,1.7859945656816,2.2452937262617,0.563057402416611,0,1.89853131913626,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0.100528972411631,0.185176890317059,0,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,38.4991942105343,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27753871307098,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,16.7477520014329,0,17.3323049551912,17.9058363553268,3.8605408508243,40.5452126770986,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0.108647371922008,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,6.42062117839031,0,0.182454789215666,0.391329237864179,6.7978506269546,0,0,0,0.063186579628488,0,0,0,0,0,0,0,1.8027707491708,0,0.685946781900644,0,0.17472666824203,1.0319161948297,0,0,0,0,18.5337866052151,0,0,0,0,0,0,0,0.19980960958213,0,0.343609788497747,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26873388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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000433460_5end | |||
|description=CAGE_peak_1_at_ENST00000433460_5end | |||
|id=chr10:21661870..21661885,- | |||
|ontology_enrichment_celltype=CL:0002139!7.73e-19!24;CL:0000071!3.06e-16!18;CL:0002546!3.06e-16!18;CL:0000076!4.17e-14!62;CL:1000413!4.29e-13!9;CL:0000213!4.66e-13!57;CL:0000215!4.66e-13!57;CL:0000115!5.24e-11!35;CL:0002078!6.86e-10!44;CL:0002544!4.75e-09!6;CL:0000222!7.00e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.79e-15;24!CL:0002537;3.19e-10;5!CL:0000071;1.77e-09;18!CL:0002078;3.97e-08;45!CL:0000115;4.01e-08;36!CL:0002543;5.54e-08;6!CL:0002138;5.54e-08;6!CL:0002618;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.20e-15,24;CL:0002537,3.14e-10,5;CL:0000213,4.13e-10,58;CL:0000215,4.13e-10,58;CL:0000115,9.50e-10,36;CL:0000071,1.34e-09,18;CL:0002546,1.34e-09,18;CL:0002078,2.22e-09,45;CL:0002543,3.89e-08,6;CL:0005020,6.19e-08,6;CL:0002138,6.19e-08,6;CL:0005022,6.19e-08,6;CL:0002618,1.09e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.77e-09;18!CL:0005022;5.54e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;9.04e-07;1!DOID:4549;9.04e-07;1!DOID:5861;9.04e-07;1!DOID:6496;9.04e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.30e-07,1;DOID:4549,9.30e-07,1;DOID:5861,9.30e-07,1;DOID:6496,9.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.06e-16!18;UBERON:0004638!3.06e-16!18;UBERON:0004852!3.06e-16!18;UBERON:0000487!1.53e-14!22;UBERON:0006914!3.67e-14!25;UBERON:0003915!4.29e-13!9;UBERON:0004700!4.29e-13!9;UBERON:0001917!4.29e-13!9;UBERON:0002049!2.65e-07!79;UBERON:0007798!2.65e-07!79;UBERON:0004872!6.91e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;7.72e-12;25!UBERON:0000487;2.21e-10;22!UBERON:0004638;1.77e-09;18!UBERON:0001986;1.77e-09;18!UBERON:0004852;1.77e-09;18!UBERON:0002108;2.45e-09;4!UBERON:0002114;1.99e-07;2!UBERON:0000305;2.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,5.89e-12,25;UBERON:0000487,1.70e-10,22;UBERON:0004638,1.34e-09,18;UBERON:0001986,1.34e-09,18;UBERON:0004852,1.34e-09,18;UBERON:0002108,3.75e-09,4;UBERON:0000305,2.02e-07,7;UBERON:0002114,2.76e-07,2 | |||
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|short_description=p1@ENST00000433460 | |||
}} |
Revision as of 12:49, 10 September 2013
Short description: | p1@ENST00000433460 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000433460_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433460_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.20e-15 | 24 |
amnion mesenchymal stem cell | 3.14e-10 | 5 |
lining cell | 4.13e-10 | 58 |
barrier cell | 4.13e-10 | 58 |
endothelial cell | 9.50e-10 | 36 |
blood vessel endothelial cell | 1.34e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.34e-09 | 18 |
meso-epithelial cell | 2.22e-09 | 45 |
vein endothelial cell | 3.89e-08 | 6 |
lymphangioblast | 6.19e-08 | 6 |
endothelial cell of lymphatic vessel | 6.19e-08 | 6 |
vascular lymphangioblast | 6.19e-08 | 6 |
endothelial cell of umbilical vein | 1.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 5.89e-12 | 25 |
simple squamous epithelium | 1.70e-10 | 22 |
blood vessel endothelium | 1.34e-09 | 18 |
endothelium | 1.34e-09 | 18 |
cardiovascular system endothelium | 1.34e-09 | 18 |
small intestine | 3.75e-09 | 4 |
amnion | 2.02e-07 | 7 |
duodenum | 2.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.30e-07 | 1 |
extraosseous chondrosarcoma | 9.30e-07 | 1 |
myxoid chondrosarcoma | 9.30e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 9.30e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.