FFCP PHASE1:Hg19::chr1:100436065..100436078,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23443|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11023|TSSclassifier=S|UniProt=Q9Y2D2|association_with_transcript=-14bp_to_ENST00000370153_5end|coexpression_cluster_id=C68|description=CAGE_peak_5_at_SLC35A3_5end|id=chr1:100436065..100436078,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002541;2.93e-17;3!CL:0002231;1.44e-16;3!CL:0002580;1.99e-08;3!CL:0002579;3.61e-08;3!CL:0002615;6.94e-08;3!CL:0002334;1.70e-07;12!CL:0000349;3.60e-07;19|ontology_enrichment_celltype_v019_2=CL:0002541,4.20e-17,3;CL:0002231,1.17e-16,3;CL:0002580,1.99e-08,3;CL:0002615,4.25e-08,3;CL:0002579,4.40e-08,3;CL:0002334,1.87e-07,12;CL:0000349,3.93e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.58e-09!106;DOID:0050687!6.31e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2513,9.48e-07,1|ontology_enrichment_uberon=UBERON:0004119!1.42e-07!169;UBERON:0000925!1.42e-07!169;UBERON:0006595!1.42e-07!169;UBERON:0001007!2.03e-07!155;UBERON:0001555!2.03e-07!155;UBERON:0007026!2.03e-07!155|ontology_enrichment_uberon_v019=UBERON:0003124;2.93e-17;3!UBERON:0000920;2.93e-17;3!UBERON:0003688;2.22e-14;6!UBERON:0002358;2.22e-14;6!UBERON:0003684;2.22e-14;6!UBERON:0001178;2.22e-14;6!UBERON:0005631;6.78e-14;10!UBERON:0000158;6.78e-14;10!UBERON:0004457;1.25e-09;9!UBERON:0000042;1.25e-09;9!UBERON:0000310;8.05e-09;10!UBERON:0001443;5.03e-08;11!UBERON:0000478;9.33e-08;24!UBERON:0000160;3.13e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.20e-17,3;UBERON:0003688,1.65e-14,6;UBERON:0002358,1.65e-14,6;UBERON:0003684,1.65e-14,6;UBERON:0001178,1.65e-14,6;UBERON:0005631,1.35e-13,14;UBERON:0000158,1.35e-13,14;UBERON:0003124,1.76e-12,7;UBERON:0000310,9.13e-09,10;UBERON:0001443,5.64e-08,11;UBERON:0004923,9.55e-08,66;UBERON:0000478,1.13e-07,24;UBERON:0000160,2.57e-07,17;UBERON:0004457,2.67e-07,12;UBERON:0000042,2.67e-07,12|phase1_expression=1.2717486548939,0.856402095563933,1.55049844505568,0,1.78784437770915,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0.369754010166788,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0,0,0.651844533267181,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0.535081656179426,1.04535523804977,0,0.383220493601921,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.302256294682921,0,0.57978255948989,0.272746120590835,0,0,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.842923450390509,0.482022059766964,0.55146986366197,0,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.98775256867763,0,0.201057944823262,0.185176890317059,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.53735113621709,0,0,0.985326475791887,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,1.30303176000821,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,3.72161711728165,4.75732117192994,0.561320188866147,1.15325234330131,4.09365799253363,0.64341568457443,0,0.154209693802656,0,0,0,0,1.69203229428271,2.00506470303285,1.19705285616665,0,0,0.131124414959424,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.510450849978337,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,6.34041284692033,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0.121360521749513,0.111443384277478,0,18.1445808400644,0.890894042497916,20.5797670406485,0,0,0,0.16480387422676,0.211125408127993,0.398495976502139,0.828851746593443,0,0,0,1.86623752597084,0.1797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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11023 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2D2 | |||
|association_with_transcript=-14bp_to_ENST00000370153_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_5_at_SLC35A3_5end | |||
|id=chr1:100436065..100436078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.93e-17;3!CL:0002231;1.44e-16;3!CL:0002580;1.99e-08;3!CL:0002579;3.61e-08;3!CL:0002615;6.94e-08;3!CL:0002334;1.70e-07;12!CL:0000349;3.60e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.20e-17,3;CL:0002231,1.17e-16,3;CL:0002580,1.99e-08,3;CL:0002615,4.25e-08,3;CL:0002579,4.40e-08,3;CL:0002334,1.87e-07,12;CL:0000349,3.93e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.58e-09!106;DOID:0050687!6.31e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.42e-07!169;UBERON:0000925!1.42e-07!169;UBERON:0006595!1.42e-07!169;UBERON:0001007!2.03e-07!155;UBERON:0001555!2.03e-07!155;UBERON:0007026!2.03e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.93e-17;3!UBERON:0000920;2.93e-17;3!UBERON:0003688;2.22e-14;6!UBERON:0002358;2.22e-14;6!UBERON:0003684;2.22e-14;6!UBERON:0001178;2.22e-14;6!UBERON:0005631;6.78e-14;10!UBERON:0000158;6.78e-14;10!UBERON:0004457;1.25e-09;9!UBERON:0000042;1.25e-09;9!UBERON:0000310;8.05e-09;10!UBERON:0001443;5.03e-08;11!UBERON:0000478;9.33e-08;24!UBERON:0000160;3.13e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.20e-17,3;UBERON:0003688,1.65e-14,6;UBERON:0002358,1.65e-14,6;UBERON:0003684,1.65e-14,6;UBERON:0001178,1.65e-14,6;UBERON:0005631,1.35e-13,14;UBERON:0000158,1.35e-13,14;UBERON:0003124,1.76e-12,7;UBERON:0000310,9.13e-09,10;UBERON:0001443,5.64e-08,11;UBERON:0004923,9.55e-08,66;UBERON:0000478,1.13e-07,24;UBERON:0000160,2.57e-07,17;UBERON:0004457,2.67e-07,12;UBERON:0000042,2.67e-07,12 | |||
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| |||
|short_description=p5@SLC35A3 | |||
}} |
Revision as of 23:07, 11 September 2013
Short description: | p5@SLC35A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC35A3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -14bp_to_ENST00000370153_5end |
EntrezGene: | SLC35A3 |
HGNC: | 11023 |
UniProt: | Q9Y2D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.20e-17 | 3 |
epithelial cell of prostate | 1.17e-16 | 3 |
preadipocyte of the breast | 1.99e-08 | 3 |
adipocyte of omentum tissue | 4.25e-08 | 3 |
omentum preadipocyte | 4.40e-08 | 3 |
preadipocyte | 1.87e-07 | 12 |
extraembryonic cell | 3.93e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.20e-17 | 3 |
omentum | 1.65e-14 | 6 |
peritoneum | 1.65e-14 | 6 |
abdominal cavity | 1.65e-14 | 6 |
visceral peritoneum | 1.65e-14 | 6 |
extraembryonic membrane | 1.35e-13 | 14 |
membranous layer | 1.35e-13 | 14 |
chorion | 1.76e-12 | 7 |
breast | 9.13e-09 | 10 |
chest | 5.64e-08 | 11 |
organ component layer | 9.55e-08 | 66 |
extraembryonic structure | 1.13e-07 | 24 |
intestine | 2.57e-07 | 17 |
cavity lining | 2.67e-07 | 12 |
serous membrane | 2.67e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.48e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.