FFCP PHASE1:Mm9::chr9:65270756..65270768,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330962|HGNC=|MCL_coexpression_id=58|UniProt=Q80WK2|association_with_transcript=-176bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end|description=CAGE_peak_5_at_Ostb_5end|id=chr9:65270756..65270768,-|ontology_enrichment_celltype=CL:0002563!6.21e-10!9;CL:0002251!6.21e-10!9;CL:0000239!7.98e-10!6;CL:0000677!7.98e-10!6;CL:0000212!7.98e-10!6;CL:0000584!7.98e-10!6;CL:0000075!2.98e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,3.34e-14,6;CL:0000677,3.34e-14,6;CL:0000584,3.34e-14,6;CL:0000075,4.66e-12,7;CL:0002563,3.38e-09,9;CL:0002251,3.38e-09,9;CL:0000682,1.54e-08,3;CL:0000066,7.99e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.72e-19!43;UBERON:0000344!1.68e-18!15;UBERON:0001242!1.42e-15!13;UBERON:0000060!1.42e-15!13;UBERON:0001262!1.42e-15!13;UBERON:0004786!1.42e-15!13;UBERON:0005409!5.13e-13!59;UBERON:0004923!2.03e-11!24;UBERON:0003350!6.21e-10!9;UBERON:0004808!6.21e-10!9;UBERON:0001277!6.21e-10!9;UBERON:0000485!8.48e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.23e-34,31;UBERON:0005409,9.90e-23,47;UBERON:0000344,1.88e-21,15;UBERON:0001242,3.51e-17,13;UBERON:0001262,3.51e-17,13;UBERON:0004786,3.51e-17,13;UBERON:0004923,2.51e-12,24;UBERON:0002108,2.94e-10,4;UBERON:0003350,3.38e-09,9;UBERON:0004808,3.38e-09,9;UBERON:0001277,3.38e-09,9;UBERON:0001007,2.79e-08,116;UBERON:0001555,2.79e-08,116;UBERON:0007026,2.79e-08,116;UBERON:0002113,2.88e-08,14;UBERON:0003918,2.88e-08,14;UBERON:0011143,2.88e-08,14;UBERON:0005095,2.88e-08,14;UBERON:0007687,2.88e-08,14;UBERON:0000331,3.13e-08,3;UBERON:0002116,3.13e-08,3;UBERON:0001204,3.13e-08,3;UBERON:0001168,3.13e-08,3;UBERON:0004119,4.91e-08,118;UBERON:0000925,4.91e-08,118;UBERON:0006595,4.91e-08,118;UBERON:0000485,2.23e-07,11;UBERON:0004921,9.56e-07,114|phase1_expression=0,87.2438519098403,92.8198448354653,16.9379958331825,21.5385163876929,5.87577451691614,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,48.797688951989,54.1405903318521,74.0759233708376,56.8605834929979,56.0225204983311,39.3348478274694,39.8207605020691,55.2108971531709,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7988960258821,13.4869788998408,0,0,0,0.201683524623343,0,1.33157938278791,9.01605216934572,7.41145296258049,1.25667604400135,4.17808591286417,4.28920991662064,12.5834717211591,16.6426298403515,13.1433240347882,0,0.114248512609729,2.25415471346161,1.22190796707189,1.55161989734101,1.61312385747733,2.08680572510049,7.82333784291891,7.84993639206874,11.4759362447274,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.936113019343682,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492422699235184,13.9910801582328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p5@Ostb}} | ||
|EntrezGene=330962 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=Q80WK2 | |||
|association_with_transcript=-176bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |||
|description=CAGE_peak_5_at_Ostb_5end | |||
|id=chr9:65270756..65270768,- | |||
|ontology_enrichment_celltype=CL:0002563!6.21e-10!9;CL:0002251!6.21e-10!9;CL:0000239!7.98e-10!6;CL:0000677!7.98e-10!6;CL:0000212!7.98e-10!6;CL:0000584!7.98e-10!6;CL:0000075!2.98e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.34e-14,6;CL:0000677,3.34e-14,6;CL:0000584,3.34e-14,6;CL:0000075,4.66e-12,7;CL:0002563,3.38e-09,9;CL:0002251,3.38e-09,9;CL:0000682,1.54e-08,3;CL:0000066,7.99e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.72e-19!43;UBERON:0000344!1.68e-18!15;UBERON:0001242!1.42e-15!13;UBERON:0000060!1.42e-15!13;UBERON:0001262!1.42e-15!13;UBERON:0004786!1.42e-15!13;UBERON:0005409!5.13e-13!59;UBERON:0004923!2.03e-11!24;UBERON:0003350!6.21e-10!9;UBERON:0004808!6.21e-10!9;UBERON:0001277!6.21e-10!9;UBERON:0000485!8.48e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.23e-34,31;UBERON:0005409,9.90e-23,47;UBERON:0000344,1.88e-21,15;UBERON:0001242,3.51e-17,13;UBERON:0001262,3.51e-17,13;UBERON:0004786,3.51e-17,13;UBERON:0004923,2.51e-12,24;UBERON:0002108,2.94e-10,4;UBERON:0003350,3.38e-09,9;UBERON:0004808,3.38e-09,9;UBERON:0001277,3.38e-09,9;UBERON:0001007,2.79e-08,116;UBERON:0001555,2.79e-08,116;UBERON:0007026,2.79e-08,116;UBERON:0002113,2.88e-08,14;UBERON:0003918,2.88e-08,14;UBERON:0011143,2.88e-08,14;UBERON:0005095,2.88e-08,14;UBERON:0007687,2.88e-08,14;UBERON:0000331,3.13e-08,3;UBERON:0002116,3.13e-08,3;UBERON:0001204,3.13e-08,3;UBERON:0001168,3.13e-08,3;UBERON:0004119,4.91e-08,118;UBERON:0000925,4.91e-08,118;UBERON:0006595,4.91e-08,118;UBERON:0000485,2.23e-07,11;UBERON:0004921,9.56e-07,114 | |||
|phase1_expression=0,87.2438519098403,92.8198448354653,16.9379958331825,21.5385163876929,5.87577451691614,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,48.797688951989,54.1405903318521,74.0759233708376,56.8605834929979,56.0225204983311,39.3348478274694,39.8207605020691,55.2108971531709,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7988960258821,13.4869788998408,0,0,0,0.201683524623343,0,1.33157938278791,9.01605216934572,7.41145296258049,1.25667604400135,4.17808591286417,4.28920991662064,12.5834717211591,16.6426298403515,13.1433240347882,0,0.114248512609729,2.25415471346161,1.22190796707189,1.55161989734101,1.61312385747733,2.08680572510049,7.82333784291891,7.84993639206874,11.4759362447274,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.936113019343682,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492422699235184,13.9910801582328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p5@Ostb | |||
}} |
Revision as of 18:32, 14 September 2013
Short description: | p5@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ostb_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -176bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.34e-14 | 6 |
gut absorptive cell | 3.34e-14 | 6 |
enterocyte | 3.34e-14 | 6 |
columnar/cuboidal epithelial cell | 4.66e-12 | 7 |
intestinal epithelial cell | 3.38e-09 | 9 |
epithelial cell of alimentary canal | 3.38e-09 | 9 |
M cell of gut | 1.54e-08 | 3 |
epithelial cell | 7.99e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.23e-34 | 31 |
gastrointestinal system | 9.90e-23 | 47 |
mucosa | 1.88e-21 | 15 |
intestinal mucosa | 3.51e-17 | 13 |
wall of intestine | 3.51e-17 | 13 |
gastrointestinal system mucosa | 3.51e-17 | 13 |
organ component layer | 2.51e-12 | 24 |
small intestine | 2.94e-10 | 4 |
epithelium of mucosa | 3.38e-09 | 9 |
gastrointestinal system epithelium | 3.38e-09 | 9 |
intestinal epithelium | 3.38e-09 | 9 |
digestive system | 2.79e-08 | 116 |
digestive tract | 2.79e-08 | 116 |
primitive gut | 2.79e-08 | 116 |
kidney | 2.88e-08 | 14 |
kidney mesenchyme | 2.88e-08 | 14 |
upper urinary tract | 2.88e-08 | 14 |
kidney rudiment | 2.88e-08 | 14 |
kidney field | 2.88e-08 | 14 |
ileal mucosa | 3.13e-08 | 3 |
ileum | 3.13e-08 | 3 |
mucosa of small intestine | 3.13e-08 | 3 |
wall of small intestine | 3.13e-08 | 3 |
endoderm-derived structure | 4.91e-08 | 118 |
endoderm | 4.91e-08 | 118 |
presumptive endoderm | 4.91e-08 | 118 |
simple columnar epithelium | 2.23e-07 | 11 |
subdivision of digestive tract | 9.56e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.