FFCP PHASE1:Mm9::chr10:50614300..50614322,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=173|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:50614300..50614322,-|id=chr10:50614300..50614322,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,2.69e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.29e-15!14;UBERON:0003918!1.29e-15!14;UBERON:0005095!1.29e-15!14;UBERON:0007687!1.29e-15!14;UBERON:0000489!6.62e-14!21;UBERON:0006554!3.99e-13!16;UBERON:0001008!4.18e-12!17|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.74e-36,14;UBERON:0003918,4.74e-36,14;UBERON:0011143,4.74e-36,14;UBERON:0005095,4.74e-36,14;UBERON:0007687,4.74e-36,14;UBERON:0006554,1.16e-27,18;UBERON:0001008,4.09e-26,19;UBERON:0000489,1.83e-23,21;UBERON:0003103,1.53e-10,43;UBERON:0002420,4.73e-09,8;UBERON:0007245,4.73e-09,8;UBERON:0010009,4.73e-09,8;UBERON:0010011,4.73e-09,8;UBERON:0000454,4.73e-09,8;UBERON:0005172,4.99e-09,49;UBERON:0005173,4.99e-09,49;UBERON:0002417,4.99e-09,49;UBERON:0000916,4.99e-09,49;UBERON:0000369,9.15e-09,5;UBERON:0002435,9.15e-09,5;UBERON:0000204,9.15e-09,5;UBERON:0010082,9.15e-09,5;UBERON:0000007,3.06e-08,8;UBERON:0003296,3.06e-08,8;UBERON:0010133,3.06e-08,8;UBERON:0003104,6.81e-07,61;UBERON:0009142,6.81e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,3.69281605644543,2.47016637726506,4.68822033501084,0.279182999001381,1.68828783009504,0.15279824777681,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.497627882440372,2.77995034277042,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.527853372491847,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27601481143698,2.39921876480431,2.25415471346161,2.8511185898344,2.90928730751439,3.64706263429657,2.97211724484009,1.77132177575523,3.45397201251025,2.59134044235781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,1.98067203434441,1.81102157295856,1.07168517515796,0.886701168211368,1.07021290561242,0.329098041204242,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5208175393758,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.114870937911227,1.42888107384922,0.231768651889711,0,0.824171801606613,0.294397840268795,0,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,1.31534855718921,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0|short_description=p@chr10:50614300..50614322,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=173 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:50614300..50614322,- | |||
|id=chr10:50614300..50614322,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.69e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.29e-15!14;UBERON:0003918!1.29e-15!14;UBERON:0005095!1.29e-15!14;UBERON:0007687!1.29e-15!14;UBERON:0000489!6.62e-14!21;UBERON:0006554!3.99e-13!16;UBERON:0001008!4.18e-12!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.74e-36,14;UBERON:0003918,4.74e-36,14;UBERON:0011143,4.74e-36,14;UBERON:0005095,4.74e-36,14;UBERON:0007687,4.74e-36,14;UBERON:0006554,1.16e-27,18;UBERON:0001008,4.09e-26,19;UBERON:0000489,1.83e-23,21;UBERON:0003103,1.53e-10,43;UBERON:0002420,4.73e-09,8;UBERON:0007245,4.73e-09,8;UBERON:0010009,4.73e-09,8;UBERON:0010011,4.73e-09,8;UBERON:0000454,4.73e-09,8;UBERON:0005172,4.99e-09,49;UBERON:0005173,4.99e-09,49;UBERON:0002417,4.99e-09,49;UBERON:0000916,4.99e-09,49;UBERON:0000369,9.15e-09,5;UBERON:0002435,9.15e-09,5;UBERON:0000204,9.15e-09,5;UBERON:0010082,9.15e-09,5;UBERON:0000007,3.06e-08,8;UBERON:0003296,3.06e-08,8;UBERON:0010133,3.06e-08,8;UBERON:0003104,6.81e-07,61;UBERON:0009142,6.81e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,3.69281605644543,2.47016637726506,4.68822033501084,0.279182999001381,1.68828783009504,0.15279824777681,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.497627882440372,2.77995034277042,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.527853372491847,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27601481143698,2.39921876480431,2.25415471346161,2.8511185898344,2.90928730751439,3.64706263429657,2.97211724484009,1.77132177575523,3.45397201251025,2.59134044235781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,1.98067203434441,1.81102157295856,1.07168517515796,0.886701168211368,1.07021290561242,0.329098041204242,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5208175393758,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.114870937911227,1.42888107384922,0.231768651889711,0,0.824171801606613,0.294397840268795,0,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,1.31534855718921,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr10:50614300..50614322,- | |||
}} |
Revision as of 16:51, 12 September 2013
Short description: | p@chr10:50614300..50614322, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:50614300..50614322, - |
Coexpression cluster: | MCL_coexpression_mm9:173 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.69e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.74e-36 | 14 |
kidney mesenchyme | 4.74e-36 | 14 |
upper urinary tract | 4.74e-36 | 14 |
kidney rudiment | 4.74e-36 | 14 |
kidney field | 4.74e-36 | 14 |
urinary system structure | 1.16e-27 | 18 |
renal system | 4.09e-26 | 19 |
cavitated compound organ | 1.83e-23 | 21 |
compound organ | 1.53e-10 | 43 |
basal ganglion | 4.73e-09 | 8 |
nuclear complex of neuraxis | 4.73e-09 | 8 |
aggregate regional part of brain | 4.73e-09 | 8 |
collection of basal ganglia | 4.73e-09 | 8 |
cerebral subcortex | 4.73e-09 | 8 |
abdomen element | 4.99e-09 | 49 |
abdominal segment element | 4.99e-09 | 49 |
abdominal segment of trunk | 4.99e-09 | 49 |
abdomen | 4.99e-09 | 49 |
corpus striatum | 9.15e-09 | 5 |
striatum | 9.15e-09 | 5 |
ventral part of telencephalon | 9.15e-09 | 5 |
future corpus striatum | 9.15e-09 | 5 |
pituitary gland | 3.06e-08 | 8 |
gland of diencephalon | 3.06e-08 | 8 |
neuroendocrine gland | 3.06e-08 | 8 |
mesenchyme | 6.81e-07 | 61 |
entire embryonic mesenchyme | 6.81e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.