FFCP PHASE1:Mm9::chr12:114663890..114663905,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=900|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114663890..114663905,-|id=chr12:114663890..114663905,-|ontology_enrichment_celltype=CL:0000838!1.68e-10!12;CL:0000988!5.24e-10!32;CL:0002032!5.24e-10!32;CL:0000037!5.24e-10!32;CL:0000566!5.24e-10!32;CL:0000837!5.24e-10!32;CL:0000542!1.71e-09!13;CL:0000051!1.71e-09!13;CL:0000084!2.65e-09!11;CL:0000827!2.65e-09!11;CL:0002031!5.29e-08!25;CL:0000791!9.78e-07!9;CL:0000789!9.78e-07!9;CL:0002420!9.78e-07!9;CL:0002419!9.78e-07!9;CL:0000790!9.78e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.53e-21!29;UBERON:0002390!2.38e-19!45;UBERON:0003061!2.38e-19!45;UBERON:0002193!2.77e-19!48;UBERON:0006562!5.83e-18!24;UBERON:0001557!5.83e-18!24;UBERON:0001042!5.83e-18!24;UBERON:0008814!5.83e-18!24;UBERON:0009145!5.83e-18!24;UBERON:0002370!4.43e-17!23;UBERON:0000974!4.43e-17!23;UBERON:0004807!4.43e-17!23;UBERON:0005058!4.43e-17!23;UBERON:0003351!4.43e-17!23;UBERON:0009113!4.43e-17!23;UBERON:0003295!4.43e-17!23;UBERON:0009722!4.43e-17!23;UBERON:0005562!4.43e-17!23;UBERON:0007690!4.43e-17!23;UBERON:0003408!3.96e-16!24;UBERON:0000072!2.70e-15!27;UBERON:0000063!9.24e-12!35;UBERON:0002405!2.21e-11!70;UBERON:0003081!4.84e-11!88;UBERON:0005057!6.40e-10!51;UBERON:0000065!4.51e-09!41;UBERON:0001004!1.01e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.07e-25,23;UBERON:0000974,4.07e-25,23;UBERON:0004807,4.07e-25,23;UBERON:0005058,4.07e-25,23;UBERON:0003351,4.07e-25,23;UBERON:0009113,4.07e-25,23;UBERON:0003295,4.07e-25,23;UBERON:0009722,4.07e-25,23;UBERON:0005562,4.07e-25,23;UBERON:0007690,4.07e-25,23;UBERON:0006562,5.45e-24,24;UBERON:0003408,5.45e-24,24;UBERON:0001557,5.45e-24,24;UBERON:0001042,5.45e-24,24;UBERON:0008814,5.45e-24,24;UBERON:0009145,5.45e-24,24;UBERON:0000072,4.15e-21,27;UBERON:0004177,1.62e-19,29;UBERON:0005057,1.62e-19,29;UBERON:0000077,7.84e-16,35;UBERON:0007811,2.45e-15,36;UBERON:0002193,2.88e-15,48;UBERON:0002405,2.88e-15,48;UBERON:0002390,5.06e-14,45;UBERON:0003061,5.06e-14,45;UBERON:0000065,3.19e-13,41;UBERON:0001004,7.35e-13,42;UBERON:0000153,1.63e-12,43;UBERON:0003929,2.42e-09,55;UBERON:0002368,2.14e-08,60;UBERON:0002530,1.36e-07,65;UBERON:0000490,1.90e-07,66;UBERON:0005911,4.91e-07,69|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0.234064526321993,0,0,1.54080656938085,0.699363219351979,0,0.202475267389826,0,1.41957974411207,0.822686601634433,0.42438965179803,0,3.67376519443276,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0.125666591329675,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0,1.07833612055328,0,0.889491589511453,0.299581278809645,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402619256281115,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.683471138605126,0.228778173206523,1.35982743995084,1.11961161858926,2.21119958087078,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10814456816632,0.202725215290164,0.102710957164827,0.51968329191118,1.07416017400489,1.19208812868759,1.68273629327956,1.62458479892035,2.3222283488074,1.5241361331,2.01652370273681,2.0466154955348,2.21287235772758,2.45441494581295,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114663890..114663905,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=900 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114663890..114663905,- | |||
|id=chr12:114663890..114663905,- | |||
|ontology_enrichment_celltype=CL:0000838!1.68e-10!12;CL:0000988!5.24e-10!32;CL:0002032!5.24e-10!32;CL:0000037!5.24e-10!32;CL:0000566!5.24e-10!32;CL:0000837!5.24e-10!32;CL:0000542!1.71e-09!13;CL:0000051!1.71e-09!13;CL:0000084!2.65e-09!11;CL:0000827!2.65e-09!11;CL:0002031!5.29e-08!25;CL:0000791!9.78e-07!9;CL:0000789!9.78e-07!9;CL:0002420!9.78e-07!9;CL:0002419!9.78e-07!9;CL:0000790!9.78e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.53e-21!29;UBERON:0002390!2.38e-19!45;UBERON:0003061!2.38e-19!45;UBERON:0002193!2.77e-19!48;UBERON:0006562!5.83e-18!24;UBERON:0001557!5.83e-18!24;UBERON:0001042!5.83e-18!24;UBERON:0008814!5.83e-18!24;UBERON:0009145!5.83e-18!24;UBERON:0002370!4.43e-17!23;UBERON:0000974!4.43e-17!23;UBERON:0004807!4.43e-17!23;UBERON:0005058!4.43e-17!23;UBERON:0003351!4.43e-17!23;UBERON:0009113!4.43e-17!23;UBERON:0003295!4.43e-17!23;UBERON:0009722!4.43e-17!23;UBERON:0005562!4.43e-17!23;UBERON:0007690!4.43e-17!23;UBERON:0003408!3.96e-16!24;UBERON:0000072!2.70e-15!27;UBERON:0000063!9.24e-12!35;UBERON:0002405!2.21e-11!70;UBERON:0003081!4.84e-11!88;UBERON:0005057!6.40e-10!51;UBERON:0000065!4.51e-09!41;UBERON:0001004!1.01e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.07e-25,23;UBERON:0000974,4.07e-25,23;UBERON:0004807,4.07e-25,23;UBERON:0005058,4.07e-25,23;UBERON:0003351,4.07e-25,23;UBERON:0009113,4.07e-25,23;UBERON:0003295,4.07e-25,23;UBERON:0009722,4.07e-25,23;UBERON:0005562,4.07e-25,23;UBERON:0007690,4.07e-25,23;UBERON:0006562,5.45e-24,24;UBERON:0003408,5.45e-24,24;UBERON:0001557,5.45e-24,24;UBERON:0001042,5.45e-24,24;UBERON:0008814,5.45e-24,24;UBERON:0009145,5.45e-24,24;UBERON:0000072,4.15e-21,27;UBERON:0004177,1.62e-19,29;UBERON:0005057,1.62e-19,29;UBERON:0000077,7.84e-16,35;UBERON:0007811,2.45e-15,36;UBERON:0002193,2.88e-15,48;UBERON:0002405,2.88e-15,48;UBERON:0002390,5.06e-14,45;UBERON:0003061,5.06e-14,45;UBERON:0000065,3.19e-13,41;UBERON:0001004,7.35e-13,42;UBERON:0000153,1.63e-12,43;UBERON:0003929,2.42e-09,55;UBERON:0002368,2.14e-08,60;UBERON:0002530,1.36e-07,65;UBERON:0000490,1.90e-07,66;UBERON:0005911,4.91e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.422366166455,0.234064526321993,0,0,1.54080656938085,0.699363219351979,0,0.202475267389826,0,1.41957974411207,0.822686601634433,0.42438965179803,0,3.67376519443276,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0.125666591329675,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0,1.07833612055328,0,0.889491589511453,0.299581278809645,0,0,0.173824320192276,0,0,0,0.101839363850316,0.248813941220186,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402619256281115,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.35163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.341741761595705,0,0.185194527369712,0.376736914009382,0.683471138605126,0.228778173206523,1.35982743995084,1.11961161858926,2.21119958087078,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10814456816632,0.202725215290164,0.102710957164827,0.51968329191118,1.07416017400489,1.19208812868759,1.68273629327956,1.62458479892035,2.3222283488074,1.5241361331,2.01652370273681,2.0466154955348,2.21287235772758,2.45441494581295,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114663890..114663905,- | |||
}} |
Revision as of 22:26, 12 September 2013
Short description: | p@chr12:114663890..114663905, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114663890..114663905, - |
Coexpression cluster: | MCL_coexpression_mm9:900 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.07e-25 | 23 |
neck | 4.07e-25 | 23 |
respiratory system epithelium | 4.07e-25 | 23 |
hemolymphoid system gland | 4.07e-25 | 23 |
pharyngeal epithelium | 4.07e-25 | 23 |
thymic region | 4.07e-25 | 23 |
pharyngeal gland | 4.07e-25 | 23 |
entire pharyngeal arch endoderm | 4.07e-25 | 23 |
thymus primordium | 4.07e-25 | 23 |
early pharyngeal endoderm | 4.07e-25 | 23 |
pharynx | 5.45e-24 | 24 |
gland of gut | 5.45e-24 | 24 |
upper respiratory tract | 5.45e-24 | 24 |
chordate pharynx | 5.45e-24 | 24 |
pharyngeal arch system | 5.45e-24 | 24 |
pharyngeal region of foregut | 5.45e-24 | 24 |
segment of respiratory tract | 4.15e-21 | 27 |
hemopoietic organ | 1.62e-19 | 29 |
immune organ | 1.62e-19 | 29 |
mixed endoderm/mesoderm-derived structure | 7.84e-16 | 35 |
craniocervical region | 2.45e-15 | 36 |
hemolymphoid system | 2.88e-15 | 48 |
immune system | 2.88e-15 | 48 |
hematopoietic system | 5.06e-14 | 45 |
blood island | 5.06e-14 | 45 |
respiratory tract | 3.19e-13 | 41 |
respiratory system | 7.35e-13 | 42 |
anterior region of body | 1.63e-12 | 43 |
gut epithelium | 2.42e-09 | 55 |
endocrine gland | 2.14e-08 | 60 |
gland | 1.36e-07 | 65 |
unilaminar epithelium | 1.90e-07 | 66 |
endo-epithelium | 4.91e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.