FFCP PHASE1:Mm9::chr11:58198242..58198248,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=314|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58198242..58198248,+|id=chr11:58198242..58198248,+|ontology_enrichment_celltype=CL:0002563!6.97e-11!9;CL:0002251!6.97e-11!9;CL:0000239!3.71e-09!6;CL:0000677!3.71e-09!6;CL:0000212!3.71e-09!6;CL:0000584!3.71e-09!6;CL:0000075!8.70e-08!7|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.16e-33!59;UBERON:0000160!5.75e-31!43;UBERON:0000344!8.38e-23!15;UBERON:0001242!1.73e-18!13;UBERON:0000060!1.73e-18!13;UBERON:0001262!1.73e-18!13;UBERON:0004786!1.73e-18!13;UBERON:0001007!1.96e-13!128;UBERON:0001555!1.96e-13!128;UBERON:0007026!1.96e-13!128;UBERON:0004119!4.20e-13!130;UBERON:0000925!4.20e-13!130;UBERON:0006595!4.20e-13!130;UBERON:0004923!4.53e-13!24;UBERON:0004921!1.90e-11!126;UBERON:0004185!1.90e-11!126;UBERON:0003350!6.97e-11!9;UBERON:0004808!6.97e-11!9;UBERON:0001277!6.97e-11!9;UBERON:0000485!1.04e-08!11;UBERON:0000331!1.26e-07!3;UBERON:0002116!1.26e-07!3;UBERON:0001204!1.26e-07!3;UBERON:0001168!1.26e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.13e-17,15;UBERON:0001962,4.86e-16,2;UBERON:0001961,4.86e-16,2;UBERON:0001744,4.86e-16,2;UBERON:0005409,6.07e-12,47;UBERON:0000160,2.96e-11,31;UBERON:0000331,5.17e-11,3;UBERON:0002116,5.17e-11,3;UBERON:0001204,5.17e-11,3;UBERON:0002465,5.17e-11,3;UBERON:0001168,5.17e-11,3;UBERON:0004923,5.68e-11,24;UBERON:0001242,2.00e-09,13;UBERON:0001262,2.00e-09,13;UBERON:0004786,2.00e-09,13;UBERON:0001153,4.39e-09,1;UBERON:0001045,4.39e-09,1;UBERON:0003199,1.05e-08,1;UBERON:0002108,1.75e-08,4;UBERON:0001007,9.52e-07,116;UBERON:0001555,9.52e-07,116;UBERON:0007026,9.52e-07,116|phase1_expression=0,0.697950815278722,0,1.81478526784098,0.500895729946347,0.16787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,1.83527424853736,0,0,0.861884930743556,3.6104449696711,0.252030129759931,2.21730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.58670339998127,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.658795818896044,0.502670417600539,0.596869416123452,0.38992817423824,0,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.134864346384821,0.247960367176008,1.04702376793612,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr11:58198242..58198248,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=314 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:58198242..58198248,+ | |||
|id=chr11:58198242..58198248,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.97e-11!9;CL:0002251!6.97e-11!9;CL:0000239!3.71e-09!6;CL:0000677!3.71e-09!6;CL:0000212!3.71e-09!6;CL:0000584!3.71e-09!6;CL:0000075!8.70e-08!7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.16e-33!59;UBERON:0000160!5.75e-31!43;UBERON:0000344!8.38e-23!15;UBERON:0001242!1.73e-18!13;UBERON:0000060!1.73e-18!13;UBERON:0001262!1.73e-18!13;UBERON:0004786!1.73e-18!13;UBERON:0001007!1.96e-13!128;UBERON:0001555!1.96e-13!128;UBERON:0007026!1.96e-13!128;UBERON:0004119!4.20e-13!130;UBERON:0000925!4.20e-13!130;UBERON:0006595!4.20e-13!130;UBERON:0004923!4.53e-13!24;UBERON:0004921!1.90e-11!126;UBERON:0004185!1.90e-11!126;UBERON:0003350!6.97e-11!9;UBERON:0004808!6.97e-11!9;UBERON:0001277!6.97e-11!9;UBERON:0000485!1.04e-08!11;UBERON:0000331!1.26e-07!3;UBERON:0002116!1.26e-07!3;UBERON:0001204!1.26e-07!3;UBERON:0001168!1.26e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.13e-17,15;UBERON:0001962,4.86e-16,2;UBERON:0001961,4.86e-16,2;UBERON:0001744,4.86e-16,2;UBERON:0005409,6.07e-12,47;UBERON:0000160,2.96e-11,31;UBERON:0000331,5.17e-11,3;UBERON:0002116,5.17e-11,3;UBERON:0001204,5.17e-11,3;UBERON:0002465,5.17e-11,3;UBERON:0001168,5.17e-11,3;UBERON:0004923,5.68e-11,24;UBERON:0001242,2.00e-09,13;UBERON:0001262,2.00e-09,13;UBERON:0004786,2.00e-09,13;UBERON:0001153,4.39e-09,1;UBERON:0001045,4.39e-09,1;UBERON:0003199,1.05e-08,1;UBERON:0002108,1.75e-08,4;UBERON:0001007,9.52e-07,116;UBERON:0001555,9.52e-07,116;UBERON:0007026,9.52e-07,116 | |||
|phase1_expression=0,0.697950815278722,0,1.81478526784098,0.500895729946347,0.16787927191189,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,1.83527424853736,0,0,0.861884930743556,3.6104449696711,0.252030129759931,2.21730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.58670339998127,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.658795818896044,0.502670417600539,0.596869416123452,0.38992817423824,0,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.134864346384821,0.247960367176008,1.04702376793612,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr11:58198242..58198248,+ | |||
}} |
Revision as of 20:07, 12 September 2013
Short description: | p@chr11:58198242..58198248, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58198242..58198248, + |
Coexpression cluster: | MCL_coexpression_mm9:314 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 1.13e-17 | 15 |
gut-associated lymphoid tissue | 4.86e-16 | 2 |
mucosa-associated lymphoid tissue | 4.86e-16 | 2 |
lymphoid tissue | 4.86e-16 | 2 |
gastrointestinal system | 6.07e-12 | 47 |
intestine | 2.96e-11 | 31 |
ileal mucosa | 5.17e-11 | 3 |
ileum | 5.17e-11 | 3 |
mucosa of small intestine | 5.17e-11 | 3 |
lymphoid system | 5.17e-11 | 3 |
wall of small intestine | 5.17e-11 | 3 |
organ component layer | 5.68e-11 | 24 |
intestinal mucosa | 2.00e-09 | 13 |
wall of intestine | 2.00e-09 | 13 |
gastrointestinal system mucosa | 2.00e-09 | 13 |
caecum | 4.39e-09 | 1 |
midgut | 4.39e-09 | 1 |
egg chamber | 1.05e-08 | 1 |
small intestine | 1.75e-08 | 4 |
digestive system | 9.52e-07 | 116 |
digestive tract | 9.52e-07 | 116 |
primitive gut | 9.52e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.