FFCP PHASE1:Mm9::chr4:138389179..138389192,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=499|UniProt=|association_with_transcript=5bp_to_ENSMUST00000147728_5end|description=CAGE_peak_1_at_ENSMUST00000147728_5end|id=chr4:138389179..138389192,+|ontology_enrichment_celltype=CL:0000239!9.90e-28!6;CL:0000677!9.90e-28!6;CL:0000212!9.90e-28!6;CL:0000584!9.90e-28!6;CL:0000075!1.00e-23!7;CL:0002563!2.25e-18!9;CL:0002251!2.25e-18!9;CL:0000473!7.10e-15!3;CL:0000627!7.10e-15!3;CL:0000682!7.10e-15!3;CL:0000066!4.61e-14!25;CL:0002076!7.35e-11!15;CL:0000223!4.97e-08!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-19,6;CL:0000677,1.16e-19,6;CL:0000584,1.16e-19,6;CL:0000075,6.54e-17,7;CL:0002563,3.12e-13,9;CL:0002251,3.12e-13,9;CL:0000682,1.02e-10,3;CL:0000066,2.76e-10,25;CL:0002076,4.74e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.36e-37!15;UBERON:0001242!1.31e-28!13;UBERON:0000060!1.31e-28!13;UBERON:0001262!1.31e-28!13;UBERON:0004786!1.31e-28!13;UBERON:0004923!1.37e-22!24;UBERON:0003350!2.25e-18!9;UBERON:0004808!2.25e-18!9;UBERON:0001277!2.25e-18!9;UBERON:0000331!1.38e-15!3;UBERON:0002116!1.38e-15!3;UBERON:0001204!1.38e-15!3;UBERON:0001168!1.38e-15!3;UBERON:0000485!5.79e-15!11;UBERON:0000160!5.69e-14!43;UBERON:0001962!9.28e-11!2;UBERON:0001961!9.28e-11!2;UBERON:0001744!9.28e-11!2;UBERON:0005409!1.13e-09!59;UBERON:0002465!1.90e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.63e-39,15;UBERON:0001242,2.45e-27,13;UBERON:0001262,2.45e-27,13;UBERON:0004786,2.45e-27,13;UBERON:0004923,3.73e-24,24;UBERON:0000331,3.35e-23,3;UBERON:0002116,3.35e-23,3;UBERON:0001204,3.35e-23,3;UBERON:0001168,3.35e-23,3;UBERON:0002108,1.41e-17,4;UBERON:0001962,9.61e-16,2;UBERON:0001961,9.61e-16,2;UBERON:0001744,9.61e-16,2;UBERON:0000160,1.34e-14,31;UBERON:0003350,3.12e-13,9;UBERON:0004808,3.12e-13,9;UBERON:0001277,3.12e-13,9;UBERON:0000485,6.98e-11,11;UBERON:0002465,8.12e-11,3;UBERON:0005409,2.02e-09,47;UBERON:0003199,1.47e-08,1|phase1_expression=0,0.697950815278722,0.454999239389536,2.11724947914781,1.00179145989269,3.69334398206158,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,3.67054849707472,1.14846392823004,0.86152399231815,9.26526300549323,15.5819203954227,4.53654233567875,4.21287970245079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43785736662608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000147728}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=499 | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENSMUST00000147728_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000147728_5end | |||
|id=chr4:138389179..138389192,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.90e-28!6;CL:0000677!9.90e-28!6;CL:0000212!9.90e-28!6;CL:0000584!9.90e-28!6;CL:0000075!1.00e-23!7;CL:0002563!2.25e-18!9;CL:0002251!2.25e-18!9;CL:0000473!7.10e-15!3;CL:0000627!7.10e-15!3;CL:0000682!7.10e-15!3;CL:0000066!4.61e-14!25;CL:0002076!7.35e-11!15;CL:0000223!4.97e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.16e-19,6;CL:0000677,1.16e-19,6;CL:0000584,1.16e-19,6;CL:0000075,6.54e-17,7;CL:0002563,3.12e-13,9;CL:0002251,3.12e-13,9;CL:0000682,1.02e-10,3;CL:0000066,2.76e-10,25;CL:0002076,4.74e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.36e-37!15;UBERON:0001242!1.31e-28!13;UBERON:0000060!1.31e-28!13;UBERON:0001262!1.31e-28!13;UBERON:0004786!1.31e-28!13;UBERON:0004923!1.37e-22!24;UBERON:0003350!2.25e-18!9;UBERON:0004808!2.25e-18!9;UBERON:0001277!2.25e-18!9;UBERON:0000331!1.38e-15!3;UBERON:0002116!1.38e-15!3;UBERON:0001204!1.38e-15!3;UBERON:0001168!1.38e-15!3;UBERON:0000485!5.79e-15!11;UBERON:0000160!5.69e-14!43;UBERON:0001962!9.28e-11!2;UBERON:0001961!9.28e-11!2;UBERON:0001744!9.28e-11!2;UBERON:0005409!1.13e-09!59;UBERON:0002465!1.90e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.63e-39,15;UBERON:0001242,2.45e-27,13;UBERON:0001262,2.45e-27,13;UBERON:0004786,2.45e-27,13;UBERON:0004923,3.73e-24,24;UBERON:0000331,3.35e-23,3;UBERON:0002116,3.35e-23,3;UBERON:0001204,3.35e-23,3;UBERON:0001168,3.35e-23,3;UBERON:0002108,1.41e-17,4;UBERON:0001962,9.61e-16,2;UBERON:0001961,9.61e-16,2;UBERON:0001744,9.61e-16,2;UBERON:0000160,1.34e-14,31;UBERON:0003350,3.12e-13,9;UBERON:0004808,3.12e-13,9;UBERON:0001277,3.12e-13,9;UBERON:0000485,6.98e-11,11;UBERON:0002465,8.12e-11,3;UBERON:0005409,2.02e-09,47;UBERON:0003199,1.47e-08,1 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,2.11724947914781,1.00179145989269,3.69334398206158,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,3.67054849707472,1.14846392823004,0.86152399231815,9.26526300549323,15.5819203954227,4.53654233567875,4.21287970245079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43785736662608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000147728 | |||
}} |
Revision as of 04:15, 14 September 2013
Short description: | p1@ENSMUST00000147728 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000147728_5end |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | 5bp_to_ENSMUST00000147728_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.16e-19 | 6 |
gut absorptive cell | 1.16e-19 | 6 |
enterocyte | 1.16e-19 | 6 |
columnar/cuboidal epithelial cell | 6.54e-17 | 7 |
intestinal epithelial cell | 3.12e-13 | 9 |
epithelial cell of alimentary canal | 3.12e-13 | 9 |
M cell of gut | 1.02e-10 | 3 |
epithelial cell | 2.76e-10 | 25 |
endo-epithelial cell | 4.74e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.63e-39 | 15 |
intestinal mucosa | 2.45e-27 | 13 |
wall of intestine | 2.45e-27 | 13 |
gastrointestinal system mucosa | 2.45e-27 | 13 |
organ component layer | 3.73e-24 | 24 |
ileal mucosa | 3.35e-23 | 3 |
ileum | 3.35e-23 | 3 |
mucosa of small intestine | 3.35e-23 | 3 |
wall of small intestine | 3.35e-23 | 3 |
small intestine | 1.41e-17 | 4 |
gut-associated lymphoid tissue | 9.61e-16 | 2 |
mucosa-associated lymphoid tissue | 9.61e-16 | 2 |
lymphoid tissue | 9.61e-16 | 2 |
intestine | 1.34e-14 | 31 |
epithelium of mucosa | 3.12e-13 | 9 |
gastrointestinal system epithelium | 3.12e-13 | 9 |
intestinal epithelium | 3.12e-13 | 9 |
simple columnar epithelium | 6.98e-11 | 11 |
lymphoid system | 8.12e-11 | 3 |
gastrointestinal system | 2.02e-09 | 47 |
egg chamber | 1.47e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.