FFCP PHASE1:Mm9::chr15:98784175..98784200,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:98784175..98784200,+|id=chr15:98784175..98784200,+|ontology_enrichment_celltype=CL:0000540!1.75e-15!33;CL:0000047!1.75e-15!33;CL:0000031!1.75e-15!33;CL:0000404!1.75e-15!33;CL:0000221!3.18e-15!44;CL:0000133!3.18e-15!44;CL:0002319!3.51e-15!43;CL:0000393!1.91e-14!39;CL:0000211!1.91e-14!39;CL:0000055!7.19e-14!50;CL:0000117!7.67e-14!23;CL:0000337!7.67e-14!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.67e-28,23;CL:0000337,7.67e-28,23;CL:0000540,3.85e-24,33;CL:0000047,3.85e-24,33;CL:0000031,3.85e-24,33;CL:0000404,3.85e-24,33;CL:0000393,1.74e-19,39;CL:0000211,1.74e-19,39;CL:0002319,6.40e-19,43;CL:0000221,2.39e-18,44;CL:0000133,2.39e-18,44;CL:0002609,1.22e-12,6;CL:0002321,2.83e-09,70;CL:0000120,1.77e-07,3;CL:0002613,2.81e-07,3;CL:0002608,3.87e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.53e-21!102;UBERON:0000924!4.53e-21!102;UBERON:0006601!4.53e-21!102;UBERON:0000073!5.70e-20!75;UBERON:0001016!5.70e-20!75;UBERON:0001017!1.01e-19!73;UBERON:0005743!1.01e-19!73;UBERON:0002346!3.46e-17!71;UBERON:0003075!3.46e-17!71;UBERON:0007284!3.46e-17!71;UBERON:0000033!2.58e-13!63;UBERON:0003056!2.04e-12!49;UBERON:0001049!6.09e-12!52;UBERON:0005068!6.09e-12!52;UBERON:0006241!6.09e-12!52;UBERON:0007135!6.09e-12!52;UBERON:0000955!1.37e-10!50;UBERON:0006238!1.37e-10!50;UBERON:0002616!4.79e-10!49;UBERON:0002780!2.36e-09!39;UBERON:0001890!2.36e-09!39;UBERON:0006240!2.36e-09!39;UBERON:0002020!3.36e-09!34;UBERON:0003080!8.50e-09!40;UBERON:0007811!8.58e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.02e-23,95;UBERON:0000924,1.02e-23,95;UBERON:0006601,1.02e-23,95;UBERON:0002346,3.96e-23,64;UBERON:0003075,3.96e-23,64;UBERON:0007284,3.96e-23,64;UBERON:0001017,5.74e-21,73;UBERON:0001016,3.51e-20,75;UBERON:0010371,2.99e-19,73;UBERON:0003056,9.55e-19,49;UBERON:0002020,1.41e-18,34;UBERON:0000073,6.18e-16,54;UBERON:0001049,2.26e-15,52;UBERON:0005068,2.26e-15,52;UBERON:0006241,2.26e-15,52;UBERON:0007135,2.26e-15,52;UBERON:0010314,1.40e-13,92;UBERON:0003528,2.48e-12,29;UBERON:0002791,2.48e-12,29;UBERON:0001893,2.48e-12,29;UBERON:0002780,6.88e-12,39;UBERON:0001890,6.88e-12,39;UBERON:0006240,6.88e-12,39;UBERON:0000955,1.32e-11,47;UBERON:0006238,1.32e-11,47;UBERON:0003080,1.78e-11,40;UBERON:0002616,1.35e-10,46;UBERON:0000970,1.26e-09,9;UBERON:0000019,1.26e-09,9;UBERON:0000047,1.26e-09,9;UBERON:0010312,1.26e-09,9;UBERON:0004088,1.26e-09,9;UBERON:0002104,1.26e-09,9;UBERON:0001456,1.26e-09,9;UBERON:0003072,1.26e-09,9;UBERON:0004128,1.26e-09,9;UBERON:0003071,1.26e-09,9;UBERON:0001948,4.42e-09,5;UBERON:0002315,4.42e-09,5;UBERON:0001444,1.16e-07,11;UBERON:0000956,1.24e-07,21;UBERON:0001869,1.24e-07,21;UBERON:0000203,1.24e-07,21;UBERON:0002240,1.70e-07,6;UBERON:0005174,1.70e-07,6;UBERON:0001137,1.70e-07,6;UBERON:0000369,3.65e-07,5;UBERON:0002435,3.65e-07,5;UBERON:0000204,3.65e-07,5;UBERON:0010082,3.65e-07,5;UBERON:0000020,6.31e-07,12;UBERON:0001032,6.31e-07,12;UBERON:0004456,6.31e-07,12|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0.573066879877513,0,7.08107613008592,4.23192783417626,4.43681982454325,0.677689064138264,0,0,0,0,0.599200221036809,0.384218305321555,3.11068836925433,4.18518408828241,3.57552434297349,1.42825492201902,1.54607978666129,2.69479758272899,3.35459148563827,6.43453150627015,1.10115880999389,0.510749352340751,0.614426133024974,3.95658863190582,4.7573574673253,3.64639359389732,1.3959149950069,0,0.30559649555362,1.17851434189467,1.28134512719193,2.60959224155421,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0.779358013808606,1.06001872353102,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,0.587943535678524,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,1.25668024088073,0,0.11981512450592,0,0.254140454146129,0,0.457500602818626,2.63874139437015,0.347648640384553,1.02286182932132,0.62336413367868,1.1356888414743,0.101839363850316,0,0,0,1.17108398666433,1.60931473103431,1.62055916824814,2.10986744970001,1.42876648217788,3.20284300712124,2.34254311399322,0.517406741478031,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0,0,4.01327988279209,0,0,0,0.232236671860439,0.515469845288373,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:98784175..98784200,+ | |||
|id=chr15:98784175..98784200,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.75e-15!33;CL:0000047!1.75e-15!33;CL:0000031!1.75e-15!33;CL:0000404!1.75e-15!33;CL:0000221!3.18e-15!44;CL:0000133!3.18e-15!44;CL:0002319!3.51e-15!43;CL:0000393!1.91e-14!39;CL:0000211!1.91e-14!39;CL:0000055!7.19e-14!50;CL:0000117!7.67e-14!23;CL:0000337!7.67e-14!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.67e-28,23;CL:0000337,7.67e-28,23;CL:0000540,3.85e-24,33;CL:0000047,3.85e-24,33;CL:0000031,3.85e-24,33;CL:0000404,3.85e-24,33;CL:0000393,1.74e-19,39;CL:0000211,1.74e-19,39;CL:0002319,6.40e-19,43;CL:0000221,2.39e-18,44;CL:0000133,2.39e-18,44;CL:0002609,1.22e-12,6;CL:0002321,2.83e-09,70;CL:0000120,1.77e-07,3;CL:0002613,2.81e-07,3;CL:0002608,3.87e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.53e-21!102;UBERON:0000924!4.53e-21!102;UBERON:0006601!4.53e-21!102;UBERON:0000073!5.70e-20!75;UBERON:0001016!5.70e-20!75;UBERON:0001017!1.01e-19!73;UBERON:0005743!1.01e-19!73;UBERON:0002346!3.46e-17!71;UBERON:0003075!3.46e-17!71;UBERON:0007284!3.46e-17!71;UBERON:0000033!2.58e-13!63;UBERON:0003056!2.04e-12!49;UBERON:0001049!6.09e-12!52;UBERON:0005068!6.09e-12!52;UBERON:0006241!6.09e-12!52;UBERON:0007135!6.09e-12!52;UBERON:0000955!1.37e-10!50;UBERON:0006238!1.37e-10!50;UBERON:0002616!4.79e-10!49;UBERON:0002780!2.36e-09!39;UBERON:0001890!2.36e-09!39;UBERON:0006240!2.36e-09!39;UBERON:0002020!3.36e-09!34;UBERON:0003080!8.50e-09!40;UBERON:0007811!8.58e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.02e-23,95;UBERON:0000924,1.02e-23,95;UBERON:0006601,1.02e-23,95;UBERON:0002346,3.96e-23,64;UBERON:0003075,3.96e-23,64;UBERON:0007284,3.96e-23,64;UBERON:0001017,5.74e-21,73;UBERON:0001016,3.51e-20,75;UBERON:0010371,2.99e-19,73;UBERON:0003056,9.55e-19,49;UBERON:0002020,1.41e-18,34;UBERON:0000073,6.18e-16,54;UBERON:0001049,2.26e-15,52;UBERON:0005068,2.26e-15,52;UBERON:0006241,2.26e-15,52;UBERON:0007135,2.26e-15,52;UBERON:0010314,1.40e-13,92;UBERON:0003528,2.48e-12,29;UBERON:0002791,2.48e-12,29;UBERON:0001893,2.48e-12,29;UBERON:0002780,6.88e-12,39;UBERON:0001890,6.88e-12,39;UBERON:0006240,6.88e-12,39;UBERON:0000955,1.32e-11,47;UBERON:0006238,1.32e-11,47;UBERON:0003080,1.78e-11,40;UBERON:0002616,1.35e-10,46;UBERON:0000970,1.26e-09,9;UBERON:0000019,1.26e-09,9;UBERON:0000047,1.26e-09,9;UBERON:0010312,1.26e-09,9;UBERON:0004088,1.26e-09,9;UBERON:0002104,1.26e-09,9;UBERON:0001456,1.26e-09,9;UBERON:0003072,1.26e-09,9;UBERON:0004128,1.26e-09,9;UBERON:0003071,1.26e-09,9;UBERON:0001948,4.42e-09,5;UBERON:0002315,4.42e-09,5;UBERON:0001444,1.16e-07,11;UBERON:0000956,1.24e-07,21;UBERON:0001869,1.24e-07,21;UBERON:0000203,1.24e-07,21;UBERON:0002240,1.70e-07,6;UBERON:0005174,1.70e-07,6;UBERON:0001137,1.70e-07,6;UBERON:0000369,3.65e-07,5;UBERON:0002435,3.65e-07,5;UBERON:0000204,3.65e-07,5;UBERON:0010082,3.65e-07,5;UBERON:0000020,6.31e-07,12;UBERON:0001032,6.31e-07,12;UBERON:0004456,6.31e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0.167782606057736,0,0.336093799142464,0,0.573066879877513,0,7.08107613008592,4.23192783417626,4.43681982454325,0.677689064138264,0,0,0,0,0.599200221036809,0.384218305321555,3.11068836925433,4.18518408828241,3.57552434297349,1.42825492201902,1.54607978666129,2.69479758272899,3.35459148563827,6.43453150627015,1.10115880999389,0.510749352340751,0.614426133024974,3.95658863190582,4.7573574673253,3.64639359389732,1.3959149950069,0,0.30559649555362,1.17851434189467,1.28134512719193,2.60959224155421,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0.779358013808606,1.06001872353102,0.281686839553361,0,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,0.587943535678524,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,1.25668024088073,0,0.11981512450592,0,0.254140454146129,0,0.457500602818626,2.63874139437015,0.347648640384553,1.02286182932132,0.62336413367868,1.1356888414743,0.101839363850316,0,0,0,1.17108398666433,1.60931473103431,1.62055916824814,2.10986744970001,1.42876648217788,3.20284300712124,2.34254311399322,0.517406741478031,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0,0,4.01327988279209,0,0,0,0.232236671860439,0.515469845288373,0,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0.144649058581512,0,0.54390568381871,0,0,0.642202359951168,0.35163505977661,0,0,0.94652465824877,1.17131623288992,0.861693590931196,1.19484398976276,0.891194696329576,0.849229592366497,0,1.46127928955656,0.395287777946524,1.60660658210904,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.905510786479282,1.07168517515796,0.354680467284547,1.07021290561242,0.987294123612726,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.301564624640779,0,0,0,0.556275906031529,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.516639293910924,0.506868376472335,0.352071715937262,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0.350630706544707,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.343706364687375,2.05524755931193,0,0,0,0,1.03552062350364,1.3492355185943,1.19707462020309,1.02440163452481,0.972426868273176,0.628839487883947,0.551530525350042,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.655490552289177,1.02440243847791,0.804096565378586,0.476293691283074,0.579421629724277,1.35036454324594,0.824171801606613,1.32479028120958,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.752875043322645,0.507687647350059,0.73171189149109,0.526139422875686,0.407412341537585,0,0.474540072496697,0.985044823755635,0.818462086339379,0.77468420592983,0.192906610981141,2.49810577937946,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr15:98784175..98784200,+ | |||
}} |
Revision as of 11:51, 13 September 2013
Short description: | p@chr15:98784175..98784200, + |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:98784175..98784200, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.67e-28 | 23 |
neuroblast (sensu Vertebrata) | 7.67e-28 | 23 |
neuron | 3.85e-24 | 33 |
neuronal stem cell | 3.85e-24 | 33 |
neuroblast | 3.85e-24 | 33 |
electrically signaling cell | 3.85e-24 | 33 |
electrically responsive cell | 1.74e-19 | 39 |
electrically active cell | 1.74e-19 | 39 |
neural cell | 6.40e-19 | 43 |
ectodermal cell | 2.39e-18 | 44 |
neurectodermal cell | 2.39e-18 | 44 |
neuron of cerebral cortex | 1.22e-12 | 6 |
embryonic cell | 2.83e-09 | 70 |
granule cell | 1.77e-07 | 3 |
striatum neuron | 2.81e-07 | 3 |
hippocampal neuron | 3.87e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.