FFCP PHASE1:Mm9::chr17:34727001..34727049,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106512|HGNC=|MCL_coexpression_id=3|UniProt=G3UZQ1|association_with_transcript=0bp_to_ENSMUST00000150924_5end|description=CAGE_peak_1_at_Gpsm3_5end|id=chr17:34727001..34727049,+|ontology_enrichment_celltype=CL:0000988!3.94e-08!32;CL:0002032!3.94e-08!32;CL:0000037!3.94e-08!32;CL:0000566!3.94e-08!32;CL:0000837!3.94e-08!32;CL:0002031!5.25e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-08,32;CL:0002032,1.07e-08,32;CL:0000037,1.07e-08,32;CL:0000837,1.07e-08,32;CL:0002031,1.68e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.23e-22!48;UBERON:0002405!4.70e-21!70;UBERON:0002390!3.44e-20!45;UBERON:0003061!3.44e-20!45;UBERON:0000926!1.97e-14!193;UBERON:0004120!1.97e-14!193;UBERON:0006603!1.97e-14!193;UBERON:0003081!2.01e-14!88;UBERON:0004177!1.28e-11!29;UBERON:0005057!2.81e-11!51;UBERON:0003104!3.41e-10!131;UBERON:0009142!3.41e-10!131;UBERON:0002371!2.04e-09!16;UBERON:0003408!5.45e-09!24;UBERON:0001474!6.12e-09!22;UBERON:0004765!6.12e-09!22;UBERON:0001434!6.12e-09!22;UBERON:0006562!7.41e-09!24;UBERON:0001557!7.41e-09!24;UBERON:0001042!7.41e-09!24;UBERON:0008814!7.41e-09!24;UBERON:0009145!7.41e-09!24;UBERON:0002370!9.72e-09!23;UBERON:0000974!9.72e-09!23;UBERON:0004807!9.72e-09!23;UBERON:0005058!9.72e-09!23;UBERON:0003351!9.72e-09!23;UBERON:0009113!9.72e-09!23;UBERON:0003295!9.72e-09!23;UBERON:0009722!9.72e-09!23;UBERON:0005562!9.72e-09!23;UBERON:0007690!9.72e-09!23;UBERON:0002204!1.69e-08!32;UBERON:0000077!2.31e-08!97;UBERON:0001004!8.56e-08!42;UBERON:0001041!9.73e-08!92;UBERON:0000065!1.53e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.87e-22,48;UBERON:0002405,4.87e-22,48;UBERON:0002390,1.91e-20,45;UBERON:0003061,1.91e-20,45;UBERON:0003081,6.96e-14,87;UBERON:0004177,9.32e-12,29;UBERON:0005057,9.32e-12,29;UBERON:0000077,9.98e-12,35;UBERON:0000926,4.08e-11,120;UBERON:0004120,4.08e-11,120;UBERON:0006603,4.08e-11,120;UBERON:0001041,6.38e-10,80;UBERON:0002371,1.59e-09,16;UBERON:0001474,3.28e-09,22;UBERON:0004765,3.28e-09,22;UBERON:0001434,3.28e-09,22;UBERON:0003408,4.31e-09,24;UBERON:0006562,5.88e-09,24;UBERON:0001557,5.88e-09,24;UBERON:0001042,5.88e-09,24;UBERON:0008814,5.88e-09,24;UBERON:0009145,5.88e-09,24;UBERON:0002370,7.74e-09,23;UBERON:0000974,7.74e-09,23;UBERON:0004807,7.74e-09,23;UBERON:0005058,7.74e-09,23;UBERON:0003351,7.74e-09,23;UBERON:0009113,7.74e-09,23;UBERON:0003295,7.74e-09,23;UBERON:0009722,7.74e-09,23;UBERON:0005562,7.74e-09,23;UBERON:0007690,7.74e-09,23;UBERON:0002204,8.99e-09,32;UBERON:0001004,3.12e-08,42;UBERON:0000065,5.68e-08,41;UBERON:0004119,5.82e-07,118;UBERON:0000925,5.82e-07,118;UBERON:0006595,5.82e-07,118|phase1_expression=1.44133962394315,0,0.454999239389536,0,0,0.16787927191189,0,38.995243679356,5.06839399746,4.21316147379588,3.5955773327356,2.6324812468461,58.5506496364724,73.7828196416338,15.6561588053361,15.1856450542369,4.89693314689703,55.9945343510872,55.2571167431127,47.1072513495814,4.33720779770456,14.9929336313337,10.7091913546964,14.3993180514066,11.4704640533585,0.57423196411502,0,0,0.950117097281869,1.26015064879965,3.32595765982957,0,0,0,0,0,0,294.646268038783,214.085884399521,198.939022710043,312.9391516325,325.12965084022,306.357032762658,0.251793635951155,0,0.917733760808408,7.04152209913235,0.218025156380447,0.219686182734472,0.194429899074283,1.1198913730029,0,44.4623906053001,41.3456420946466,62.5134466404983,7.20326420900652,6.5902691185914,4.12537673821954,0.606949382578793,0,1.26766280701236,1.0165335962074,1.77858959222228,134.085057874928,142.396756209644,133.570261609867,38.6484142568742,29.2005912044381,0.933206510776299,0.540023753326763,0.630974884054146,1.14260393761521,0.441737081903227,0.61245399607477,0.766763768145891,0.919218786610021,0,1.27687338085188,1.68967186581868,0.923204014111357,0.640413505216868,0,1.67509799400829,1.68828783009504,1.98637722109853,1.17851434189467,0.854230084794618,0.931997229126503,1.21161909333094,0.982430281388212,2.31891590961342,5.16254326188832,0.679971333707751,0,0.649776417447669,0.896053774194671,8.14577636764161,0.852151612890289,0.259786004602869,1.41335829804136,0,3.84979432242953,2.54805239706646,7.11066703153331,0,0,0,4.5673551887624,117.039923408522,6.97678053604676,2.4287945747259,1.52232739156071,1.38369298353635,1.65794904607885,2.58695155698551,2.01066546127481,12.6069433544531,8.24216334443496,57.4996858767418,6.47067399789637,14.3546986999256,14.5462575940567,5.59175283654366,0,0.41889341362691,5.36459815938042,6.94927722134338,12.5979573508616,10.2926883929182,1.19832511523858,1.83000241127451,0,1.56441888173049,0.255715457330331,1.66230435647648,1.29793010454206,2.34230536855727,16.9193480029727,3.53811861807145,2.94618598241064,0.650602214813519,0.459804208866946,2.16074555766419,0.90422890701429,0.816437989815934,0.640568601424249,0.749613796477831,2.58703370739016,0.431135985865684,0.378212160335639,1.05570674498369,3.06874025398605,1.94633074457919,3.1342694986995,3.2925141825271,0.39806853363698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| ||
|EntrezGene=106512 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=G3UZQ1 | |||
|association_with_transcript=0bp_to_ENSMUST00000150924_5end | |||
|description=CAGE_peak_1_at_Gpsm3_5end | |||
|id=chr17:34727001..34727049,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.94e-08!32;CL:0002032!3.94e-08!32;CL:0000037!3.94e-08!32;CL:0000566!3.94e-08!32;CL:0000837!3.94e-08!32;CL:0002031!5.25e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-08,32;CL:0002032,1.07e-08,32;CL:0000037,1.07e-08,32;CL:0000837,1.07e-08,32;CL:0002031,1.68e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.87e-22,48;UBERON:0002405,4.87e-22,48;UBERON:0002390,1.91e-20,45;UBERON:0003061,1.91e-20,45;UBERON:0003081,6.96e-14,87;UBERON:0004177,9.32e-12,29;UBERON:0005057,9.32e-12,29;UBERON:0000077,9.98e-12,35;UBERON:0000926,4.08e-11,120;UBERON:0004120,4.08e-11,120;UBERON:0006603,4.08e-11,120;UBERON:0001041,6.38e-10,80;UBERON:0002371,1.59e-09,16;UBERON:0001474,3.28e-09,22;UBERON:0004765,3.28e-09,22;UBERON:0001434,3.28e-09,22;UBERON:0003408,4.31e-09,24;UBERON:0006562,5.88e-09,24;UBERON:0001557,5.88e-09,24;UBERON:0001042,5.88e-09,24;UBERON:0008814,5.88e-09,24;UBERON:0009145,5.88e-09,24;UBERON:0002370,7.74e-09,23;UBERON:0000974,7.74e-09,23;UBERON:0004807,7.74e-09,23;UBERON:0005058,7.74e-09,23;UBERON:0003351,7.74e-09,23;UBERON:0009113,7.74e-09,23;UBERON:0003295,7.74e-09,23;UBERON:0009722,7.74e-09,23;UBERON:0005562,7.74e-09,23;UBERON:0007690,7.74e-09,23;UBERON:0002204,8.99e-09,32;UBERON:0001004,3.12e-08,42;UBERON:0000065,5.68e-08,41;UBERON:0004119,5.82e-07,118;UBERON:0000925,5.82e-07,118;UBERON:0006595,5.82e-07,118 | |||
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| |||
|short_description=p1@Gpsm3 | |||
}} |
Revision as of 14:15, 13 September 2013
Short description: | p1@Gpsm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpsm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000150924_5end |
EntrezGene: | Gpsm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.07e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.07e-08 | 32 |
hematopoietic stem cell | 1.07e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.07e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 1.68e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.